RNA–Protein interactions for RNA: ENST00000459909.1

TMEM50B-205, Transcript of transmembrane protein 50B, humanhuman

TSL 2

Gene TMEM50B, Length 618 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-205ENST00000459909 HNRNPA1P09651 372 aaKnown RBP eCLIP18.49■□□□□ 0.55
TMEM50B-205ENST00000459909 FUT10Q6P4F1 479 aa18.49■□□□□ 0.55
TMEM50B-205ENST00000459909 SMG8Q8ND04 991 aaKnown RBP18.49■□□□□ 0.55
TMEM50B-205ENST00000459909 B3GALT6Q96L58 329 aa18.49■□□□□ 0.55
TMEM50B-205ENST00000459909 GAD1Q99259 594 aa18.49■□□□□ 0.55
TMEM50B-205ENST00000459909 RAB23Q9ULC3 237 aa18.49■□□□□ 0.55
TMEM50B-205ENST00000459909 PATJQ8NI35 1801 aa18.49■□□□□ 0.55
TMEM50B-205ENST00000459909 CACNA1GO43497 2377 aa18.48■□□□□ 0.55
TMEM50B-205ENST00000459909 DDX11L8A8MPP1 907 aa18.48■□□□□ 0.55
TMEM50B-205ENST00000459909 F8W810 466 aa18.48■□□□□ 0.55
TMEM50B-205ENST00000459909 PSMD10O75832 226 aa18.48■□□□□ 0.55
TMEM50B-205ENST00000459909 TARSP26639 723 aaKnown RBP18.48■□□□□ 0.55
TMEM50B-205ENST00000459909 MLH1P40692 756 aa18.48■□□□□ 0.55
TMEM50B-205ENST00000459909 USP11P51784 963 aa18.48■□□□□ 0.55
TMEM50B-205ENST00000459909 SPEM2Q0P670 501 aa18.48■□□□□ 0.55
TMEM50B-205ENST00000459909 FAM184AQ8NB25 1140 aa18.48■□□□□ 0.55
TMEM50B-205ENST00000459909 WASF1Q92558 559 aa18.48■□□□□ 0.55
TMEM50B-205ENST00000459909 PHF20Q9BVI0 1012 aa18.48■□□□□ 0.55
TMEM50B-205ENST00000459909 GPR62Q9BZJ7 368 aa18.48■□□□□ 0.55
TMEM50B-205ENST00000459909 FBXW11Q9UKB1 542 aa18.48■□□□□ 0.55
TMEM50B-205ENST00000459909 MRPS17Q9Y2R5 130 aaKnown RBP18.48■□□□□ 0.55
TMEM50B-205ENST00000459909 IPPQ9Y573 584 aa18.48■□□□□ 0.55
TMEM50B-205ENST00000459909 COL4A3Q01955 1670 aa18.47■□□□□ 0.55
TMEM50B-205ENST00000459909 LRP3O75074 770 aa18.47■□□□□ 0.55
TMEM50B-205ENST00000459909 RPL17P18621 184 aaKnown RBP18.47■□□□□ 0.55
TMEM50B-205ENST00000459909 SCNN1GP51170 649 aa18.47■□□□□ 0.55
TMEM50B-205ENST00000459909 NRLP54845 237 aa18.47■□□□□ 0.55
TMEM50B-205ENST00000459909 NTHL1P78549 312 aa18.47■□□□□ 0.55
TMEM50B-205ENST00000459909 HMGN5P82970 282 aaKnown RBP18.47■□□□□ 0.55
TMEM50B-205ENST00000459909 LIN9Q5TKA1 542 aa18.47■□□□□ 0.55
TMEM50B-205ENST00000459909 LAIR1Q6GTX8 287 aa18.47■□□□□ 0.55
TMEM50B-205ENST00000459909 ZNF852Q6ZMS4 543 aa18.47■□□□□ 0.55
TMEM50B-205ENST00000459909 TPRG1Q6ZUI0 275 aa18.47■□□□□ 0.55
TMEM50B-205ENST00000459909 ANO5Q75V66 913 aa18.47■□□□□ 0.55
TMEM50B-205ENST00000459909 CELF5Q8N6W0 485 aaKnown RBP18.47■□□□□ 0.55
TMEM50B-205ENST00000459909 BICD2Q8TD16 824 aa18.47■□□□□ 0.55
TMEM50B-205ENST00000459909 AIFM3Q96NN9 605 aa18.47■□□□□ 0.55
TMEM50B-205ENST00000459909 MINDY3Q9H8M7 445 aa18.47■□□□□ 0.55
TMEM50B-205ENST00000459909 MIOSQ9NXC5 875 aa18.47■□□□□ 0.55
TMEM50B-205ENST00000459909 VPS54Q9P1Q0 977 aa18.47■□□□□ 0.55
TMEM50B-205ENST00000459909 ADAM28Q9UKQ2 775 aa18.47■□□□□ 0.55
TMEM50B-205ENST00000459909 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.47■□□□□ 0.55
TMEM50B-205ENST00000459909 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.47■□□□□ 0.55
TMEM50B-205ENST00000459909 EDIL3O43854 480 aa18.46■□□□□ 0.55
TMEM50B-205ENST00000459909 HSP90AA1P07900 732 aaKnown RBP18.46■□□□□ 0.55
TMEM50B-205ENST00000459909 SRGAP2CP0DJJ0 459 aa18.46■□□□□ 0.55
TMEM50B-205ENST00000459909 XBP1P17861 261 aa18.46■□□□□ 0.55
TMEM50B-205ENST00000459909 HOXA9P31269 272 aa18.46■□□□□ 0.55
TMEM50B-205ENST00000459909 FOSBP53539 338 aa18.46■□□□□ 0.55
TMEM50B-205ENST00000459909 CUL4AQ13619 759 aa18.46■□□□□ 0.55
TMEM50B-205ENST00000459909 B3GNT9Q6UX72 402 aa18.46■□□□□ 0.55
TMEM50B-205ENST00000459909 EXOC8Q8IYI6 725 aa18.46■□□□□ 0.55
TMEM50B-205ENST00000459909 CCDC148Q8NFR7 591 aa18.46■□□□□ 0.55
TMEM50B-205ENST00000459909 SLC7A3Q8WY07 619 aa18.46■□□□□ 0.55
TMEM50B-205ENST00000459909 GJA10Q969M2 543 aa18.46■□□□□ 0.55
TMEM50B-205ENST00000459909 KXD1Q9BQD3 176 aa18.46■□□□□ 0.55
TMEM50B-205ENST00000459909 RNF39Q9H2S5 420 aa18.46■□□□□ 0.55
TMEM50B-205ENST00000459909 SMC3Q9UQE7 1217 aa18.46■□□□□ 0.55
TMEM50B-205ENST00000459909 CHD6Q8TD26 2715 aa18.45■□□□□ 0.54
TMEM50B-205ENST00000459909 USP24Q9UPU5 2620 aa18.45■□□□□ 0.54
TMEM50B-205ENST00000459909 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.45■□□□□ 0.54
TMEM50B-205ENST00000459909 XYLBO75191 536 aa18.45■□□□□ 0.54
TMEM50B-205ENST00000459909 RETP07949 1114 aa18.45■□□□□ 0.54
TMEM50B-205ENST00000459909 FDPSP14324 419 aaKnown RBP18.45■□□□□ 0.54
TMEM50B-205ENST00000459909 NLRP5P59047 1200 aa18.45■□□□□ 0.54
TMEM50B-205ENST00000459909 PSMC5P62195 406 aa18.45■□□□□ 0.54
TMEM50B-205ENST00000459909 ADCY1Q08828 1119 aa18.45■□□□□ 0.54
TMEM50B-205ENST00000459909 MTAPQ13126 283 aa18.45■□□□□ 0.54
TMEM50B-205ENST00000459909 FZD5Q13467 585 aa18.45■□□□□ 0.54
TMEM50B-205ENST00000459909 BECN1Q14457 450 aa18.45■□□□□ 0.54
TMEM50B-205ENST00000459909 PPP2R5DQ14738 602 aa18.45■□□□□ 0.54
TMEM50B-205ENST00000459909 PPM1LQ5SGD2 360 aa18.45■□□□□ 0.54
TMEM50B-205ENST00000459909 MAMSTRQ6ZN01 415 aa18.45■□□□□ 0.54
TMEM50B-205ENST00000459909 ITFG1Q8TB96 612 aa18.45■□□□□ 0.54
TMEM50B-205ENST00000459909 PRPF31Q8WWY3 499 aaKnown RBP18.45■□□□□ 0.54
TMEM50B-205ENST00000459909 PSPC1Q8WXF1 523 aaKnown RBP18.45■□□□□ 0.54
TMEM50B-205ENST00000459909 CCDC51Q96ER9 411 aa18.45■□□□□ 0.54
TMEM50B-205ENST00000459909 ZFP42Q96MM3 310 aa18.45■□□□□ 0.54
TMEM50B-205ENST00000459909 EIF2AQ9BY44 585 aaKnown RBP18.45■□□□□ 0.54
TMEM50B-205ENST00000459909 FOXD4L1Q9NU39 408 aa18.45■□□□□ 0.54
TMEM50B-205ENST00000459909 GIT1Q9Y2X7 761 aa18.45■□□□□ 0.54
TMEM50B-205ENST00000459909 CHD8Q9HCK8 2581 aa18.45■□□□□ 0.54
TMEM50B-205ENST00000459909 WDR81Q562E7 1941 aa18.45■□□□□ 0.54
TMEM50B-205ENST00000459909 MYH15Q9Y2K3 1946 aa18.45■□□□□ 0.54
TMEM50B-205ENST00000459909 ERLIN2O94905 339 aa18.44■□□□□ 0.54
TMEM50B-205ENST00000459909 C8AP07357 584 aa18.44■□□□□ 0.54
TMEM50B-205ENST00000459909 POU2F2P09086 479 aa18.44■□□□□ 0.54
TMEM50B-205ENST00000459909 TDGF1P13385 188 aa18.44■□□□□ 0.54
TMEM50B-205ENST00000459909 AXLP30530 894 aa18.44■□□□□ 0.54
TMEM50B-205ENST00000459909 TRIM29Q14134 588 aa18.44■□□□□ 0.54
TMEM50B-205ENST00000459909 PCBP1Q15365 356 aaKnown RBP eCLIP18.44■□□□□ 0.54
TMEM50B-205ENST00000459909 Q4G0T1 1027 aa18.44■□□□□ 0.54
TMEM50B-205ENST00000459909 PLA2G4FQ68DD2 849 aa18.44■□□□□ 0.54
TMEM50B-205ENST00000459909 PRSS55Q6UWB4 352 aaPredicted RBP18.44■□□□□ 0.54
TMEM50B-205ENST00000459909 DDX1Q92499 740 aaKnown RBP18.44■□□□□ 0.54
TMEM50B-205ENST00000459909 SH3GLB2Q9NR46 395 aa18.44■□□□□ 0.54
TMEM50B-205ENST00000459909 ANGPTL2Q9UKU9 493 aa18.44■□□□□ 0.54
TMEM50B-205ENST00000459909 KCNH3Q9ULD8 1083 aa18.44■□□□□ 0.54
TMEM50B-205ENST00000459909 POLIQ9UNA4 740 aa18.44■□□□□ 0.54
TMEM50B-205ENST00000459909 KIF3AQ9Y496 699 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms