RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 TADA2AO75478 443 aa20.72■□□□□ 0.91
MSH6-206ENST00000455383 XRCC6P12956 609 aaKnown RBP eCLIP20.72■□□□□ 0.91
MSH6-206ENST00000455383 NR5A1Q13285 461 aa20.72■□□□□ 0.91
MSH6-206ENST00000455383 HSP90AA2PQ14568 343 aaPredicted RBP20.72■□□□□ 0.91
MSH6-206ENST00000455383 PRSS55Q6UWB4 352 aaPredicted RBP20.72■□□□□ 0.91
MSH6-206ENST00000455383 GLYCTKQ8IVS8 523 aa20.72■□□□□ 0.91
MSH6-206ENST00000455383 RABGGTAQ92696 567 aa20.72■□□□□ 0.91
MSH6-206ENST00000455383 PAAF1Q9BRP4 392 aa20.72■□□□□ 0.91
MSH6-206ENST00000455383 KLK14Q9P0G3 267 aa20.72■□□□□ 0.91
MSH6-206ENST00000455383 SIT1Q9Y3P8 196 aa20.72■□□□□ 0.91
MSH6-206ENST00000455383 SF3B1O75533 1304 aaKnown RBP eCLIP20.72■□□□□ 0.91
MSH6-206ENST00000455383 ZNF292O60281 2723 aa20.71■□□□□ 0.91
MSH6-206ENST00000455383 CACNA1AO00555 2505 aa20.71■□□□□ 0.91
MSH6-206ENST00000455383 EP300Q09472 2414 aaPredicted RBP20.71■□□□□ 0.91
MSH6-206ENST00000455383 DTNBO60941 627 aa20.71■□□□□ 0.91
MSH6-206ENST00000455383 DCNP07585 359 aaKnown RBP20.71■□□□□ 0.91
MSH6-206ENST00000455383 FDPSP14324 419 aaKnown RBP20.71■□□□□ 0.91
MSH6-206ENST00000455383 RFX1P22670 979 aa20.71■□□□□ 0.91
MSH6-206ENST00000455383 FSHRP23945 695 aa20.71■□□□□ 0.91
MSH6-206ENST00000455383 STARD6P59095 220 aa20.71■□□□□ 0.91
MSH6-206ENST00000455383 TUSC3Q13454 348 aa20.71■□□□□ 0.91
MSH6-206ENST00000455383 DCLRE1AQ6PJP8 1040 aa20.71■□□□□ 0.91
MSH6-206ENST00000455383 LNX1Q8TBB1 728 aaPredicted RBP20.71■□□□□ 0.91
MSH6-206ENST00000455383 PIK3R5Q8WYR1 880 aa20.71■□□□□ 0.91
MSH6-206ENST00000455383 PRIMPOLQ96LW4 560 aa20.71■□□□□ 0.91
MSH6-206ENST00000455383 CLSTN3Q9BQT9 956 aa20.71■□□□□ 0.91
MSH6-206ENST00000455383 RPP25Q9BUL9 199 aaKnown RBP20.71■□□□□ 0.91
MSH6-206ENST00000455383 POLR3FQ9H1D9 316 aaPredicted RBP20.71■□□□□ 0.91
MSH6-206ENST00000455383 FZD8Q9H461 694 aa20.71■□□□□ 0.91
MSH6-206ENST00000455383 CACNG4Q9UBN1 327 aa20.71■□□□□ 0.91
MSH6-206ENST00000455383 PARP2Q9UGN5 583 aa20.71■□□□□ 0.91
MSH6-206ENST00000455383 R4GN57 208 aa20.71■□□□□ 0.91
MSH6-206ENST00000455383 HNRNPA1P09651 372 aaKnown RBP eCLIP20.7■□□□□ 0.9
MSH6-206ENST00000455383 SP9P0CG40 484 aa20.7■□□□□ 0.9
MSH6-206ENST00000455383 KRT2P35908 639 aa20.7■□□□□ 0.9
MSH6-206ENST00000455383 CALCRLQ16602 461 aa20.7■□□□□ 0.9
MSH6-206ENST00000455383 FAM187BQ17R55 369 aa20.7■□□□□ 0.9
MSH6-206ENST00000455383 CDCA2Q69YH5 1023 aaPredicted RBP20.7■□□□□ 0.9
MSH6-206ENST00000455383 C1orf210Q8IVY1 113 aa20.7■□□□□ 0.9
MSH6-206ENST00000455383 WASF1Q92558 559 aa20.7■□□□□ 0.9
MSH6-206ENST00000455383 FGF14Q92915 247 aa20.7■□□□□ 0.9
MSH6-206ENST00000455383 MTMR9Q96QG7 549 aa20.7■□□□□ 0.9
MSH6-206ENST00000455383 TTC12Q9H892 705 aaPredicted RBP20.7■□□□□ 0.9
MSH6-206ENST00000455383 ORC3Q9UBD5 711 aaPredicted RBP20.7■□□□□ 0.9
MSH6-206ENST00000455383 FANCMQ8IYD8 2048 aa20.7■□□□□ 0.9
MSH6-206ENST00000455383 PTGESO14684 152 aa20.69■□□□□ 0.9
MSH6-206ENST00000455383 POU2F2P09086 479 aa20.69■□□□□ 0.9
MSH6-206ENST00000455383 GLULP15104 373 aa20.69■□□□□ 0.9
MSH6-206ENST00000455383 HOXA9P31269 272 aa20.69■□□□□ 0.9
MSH6-206ENST00000455383 GPC5P78333 572 aa20.69■□□□□ 0.9
MSH6-206ENST00000455383 NAB2Q15742 525 aa20.69■□□□□ 0.9
MSH6-206ENST00000455383 SPECC1Q5M775 1068 aa20.69■□□□□ 0.9
MSH6-206ENST00000455383 GRASPQ7Z6J2 395 aaPredicted RBP20.69■□□□□ 0.9
MSH6-206ENST00000455383 PJA1Q8NG27 643 aa20.69■□□□□ 0.9
MSH6-206ENST00000455383 KCNG4Q8TDN1 519 aa20.69■□□□□ 0.9
MSH6-206ENST00000455383 PIGOQ8TEQ8 1089 aa20.69■□□□□ 0.9
MSH6-206ENST00000455383 TTPALQ9BTX7 342 aa20.69■□□□□ 0.9
MSH6-206ENST00000455383 DDX23Q9BUQ8 820 aaKnown RBP20.69■□□□□ 0.9
MSH6-206ENST00000455383 PRMT7Q9NVM4 692 aaPredicted RBP20.69■□□□□ 0.9
MSH6-206ENST00000455383 CDH7Q9ULB5 785 aa20.69■□□□□ 0.9
MSH6-206ENST00000455383 DOCK6Q96HP0 2047 aa20.69■□□□□ 0.9
MSH6-206ENST00000455383 A0A087WWV3 80 aa20.68■□□□□ 0.9
MSH6-206ENST00000455383 TTLL13PA6NNM8 815 aa20.68■□□□□ 0.9
MSH6-206ENST00000455383 WNT7AO00755 349 aa20.68■□□□□ 0.9
MSH6-206ENST00000455383 KIF4AO95239 1232 aa20.68■□□□□ 0.9
MSH6-206ENST00000455383 SPATA31C1P0DKV0 1188 aa20.68■□□□□ 0.9
MSH6-206ENST00000455383 PARM1Q6UWI2 310 aa20.68■□□□□ 0.9
MSH6-206ENST00000455383 MAML2Q8IZL2 1156 aaPredicted RBP20.68■□□□□ 0.9
MSH6-206ENST00000455383 ST13P5Q8NFI4 369 aaPredicted RBP20.68■□□□□ 0.9
MSH6-206ENST00000455383 GPRC5CQ9NQ84 441 aa20.68■□□□□ 0.9
MSH6-206ENST00000455383 CASTOR2A6NHX0 329 aa20.67■□□□□ 0.9
MSH6-206ENST00000455383 POTEMA6NI47 508 aa20.67■□□□□ 0.9
MSH6-206ENST00000455383 USO1O60763 962 aaKnown RBP20.67■□□□□ 0.9
MSH6-206ENST00000455383 TXKP42681 527 aa20.67■□□□□ 0.9
MSH6-206ENST00000455383 NTHL1P78549 312 aa20.67■□□□□ 0.9
MSH6-206ENST00000455383 PSMD5Q16401 504 aa20.67■□□□□ 0.9
MSH6-206ENST00000455383 FAM171A1Q5VUB5 890 aa20.67■□□□□ 0.9
MSH6-206ENST00000455383 ZC3H14Q6PJT7 736 aaKnown RBP20.67■□□□□ 0.9
MSH6-206ENST00000455383 HASPINQ8TF76 798 aa20.67■□□□□ 0.9
MSH6-206ENST00000455383 RMDN1Q96DB5 314 aa20.67■□□□□ 0.9
MSH6-206ENST00000455383 SHDQ96IW2 340 aa20.67■□□□□ 0.9
MSH6-206ENST00000455383 CCDC43Q96MW1 224 aaKnown RBP20.67■□□□□ 0.9
MSH6-206ENST00000455383 FOXQ1Q9C009 403 aa20.67■□□□□ 0.9
MSH6-206ENST00000455383 CXCL16Q9H2A7 254 aa20.67■□□□□ 0.9
MSH6-206ENST00000455383 PDZD7Q9H5P4 517 aa20.67■□□□□ 0.9
MSH6-206ENST00000455383 BRMS1Q9HCU9 246 aa20.67■□□□□ 0.9
MSH6-206ENST00000455383 OTOGLQ3ZCN5 2332 aa20.66■□□□□ 0.9
MSH6-206ENST00000455383 LRRIQ4A6NIV6 560 aa20.66■□□□□ 0.9
MSH6-206ENST00000455383 ADAM12O43184 909 aa20.66■□□□□ 0.9
MSH6-206ENST00000455383 C8AP07357 584 aa20.66■□□□□ 0.9
MSH6-206ENST00000455383 ELAVL2Q12926 359 aaKnown RBP20.66■□□□□ 0.9
MSH6-206ENST00000455383 RAB33AQ14088 237 aa20.66■□□□□ 0.9
MSH6-206ENST00000455383 PPM1LQ5SGD2 360 aa20.66■□□□□ 0.9
MSH6-206ENST00000455383 LIN9Q5TKA1 542 aa20.66■□□□□ 0.9
MSH6-206ENST00000455383 MCPH1Q8NEM0 835 aa20.66■□□□□ 0.9
MSH6-206ENST00000455383 FGF13Q92913 245 aa20.66■□□□□ 0.9
MSH6-206ENST00000455383 SNTG2Q9NY99 539 aa20.66■□□□□ 0.9
MSH6-206ENST00000455383 MYH15Q9Y2K3 1946 aa20.65■□□□□ 0.9
MSH6-206ENST00000455383 N4BP3O15049 544 aa20.65■□□□□ 0.9
MSH6-206ENST00000455383 NEMFO60524 1076 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms