RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 RNF19AQ9NV58 838 aa15.6■□□□□ 0.09
HMGXB4-204ENST00000455359 SNTG2Q9NY99 539 aa15.6■□□□□ 0.09
HMGXB4-204ENST00000455359 TMEM63CQ9P1W3 806 aa15.6■□□□□ 0.09
HMGXB4-204ENST00000455359 MSRAQ9UJ68 235 aa15.6■□□□□ 0.09
HMGXB4-204ENST00000455359 CPSF3Q9UKF6 684 aaKnown RBP15.6■□□□□ 0.09
HMGXB4-204ENST00000455359 MAPK8IP1Q9UQF2 711 aa15.6■□□□□ 0.09
HMGXB4-204ENST00000455359 HES2Q9Y543 173 aa15.6■□□□□ 0.09
HMGXB4-204ENST00000455359 TTC3P53804 2025 aa15.59■□□□□ 0.09
HMGXB4-204ENST00000455359 BICDL2A1A5D9 508 aa15.59■□□□□ 0.09
HMGXB4-204ENST00000455359 EXTL3O43909 919 aa15.59■□□□□ 0.09
HMGXB4-204ENST00000455359 ADRB2P07550 413 aa15.59■□□□□ 0.09
HMGXB4-204ENST00000455359 CCNE1P24864 410 aa15.59■□□□□ 0.09
HMGXB4-204ENST00000455359 NLRP12P59046 1061 aa15.59■□□□□ 0.09
HMGXB4-204ENST00000455359 ZCWPW2Q504Y3 356 aa15.59■□□□□ 0.09
HMGXB4-204ENST00000455359 XKR4Q5GH76 650 aa15.59■□□□□ 0.09
HMGXB4-204ENST00000455359 NOMO2Q5JPE7 1267 aa15.59■□□□□ 0.09
HMGXB4-204ENST00000455359 CLLU1OSQ5K130 101 aa15.59■□□□□ 0.09
HMGXB4-204ENST00000455359 SASS6Q6UVJ0 657 aa15.59■□□□□ 0.09
HMGXB4-204ENST00000455359 ALKAL1Q6UXT8 129 aa15.59■□□□□ 0.09
HMGXB4-204ENST00000455359 THNSL1Q8IYQ7 743 aa15.59■□□□□ 0.09
HMGXB4-204ENST00000455359 GPD1LQ8N335 351 aa15.59■□□□□ 0.09
HMGXB4-204ENST00000455359 XXYLT1Q8NBI6 393 aa15.59■□□□□ 0.09
HMGXB4-204ENST00000455359 P2RX5Q93086 422 aa15.59■□□□□ 0.09
HMGXB4-204ENST00000455359 CASD1Q96PB1 797 aa15.59■□□□□ 0.09
HMGXB4-204ENST00000455359 CBWD1Q9BRT8 395 aa15.59■□□□□ 0.09
HMGXB4-204ENST00000455359 HAPLN2Q9GZV7 340 aa15.59■□□□□ 0.09
HMGXB4-204ENST00000455359 RNF39Q9H2S5 420 aa15.59■□□□□ 0.09
HMGXB4-204ENST00000455359 DMAC2Q9NW81 257 aa15.59■□□□□ 0.09
HMGXB4-204ENST00000455359 HSPBP1Q9NZL4 362 aa15.59■□□□□ 0.09
HMGXB4-204ENST00000455359 PARP2Q9UGN5 583 aa15.59■□□□□ 0.09
HMGXB4-204ENST00000455359 TRIOBPQ9H2D6 2365 aa15.58■□□□□ 0.08
HMGXB4-204ENST00000455359 ARL5CA6NH57 179 aa15.58■□□□□ 0.08
HMGXB4-204ENST00000455359 TISP43B9A030 160 aa15.58■□□□□ 0.08
HMGXB4-204ENST00000455359 MAPK13O15264 365 aa15.58■□□□□ 0.08
HMGXB4-204ENST00000455359 RECQL4O94761 1208 aa15.58■□□□□ 0.08
HMGXB4-204ENST00000455359 NR3C1P04150 777 aa15.58■□□□□ 0.08
HMGXB4-204ENST00000455359 FGFR1P11362 822 aa15.58■□□□□ 0.08
HMGXB4-204ENST00000455359 HARSP12081 509 aaKnown RBP15.58■□□□□ 0.08
HMGXB4-204ENST00000455359 AKAP5P24588 427 aa15.58■□□□□ 0.08
HMGXB4-204ENST00000455359 LRRC43Q8N309 656 aa15.58■□□□□ 0.08
HMGXB4-204ENST00000455359 LPPQ93052 612 aa15.58■□□□□ 0.08
HMGXB4-204ENST00000455359 IKZF4Q9H2S9 585 aa15.58■□□□□ 0.08
HMGXB4-204ENST00000455359 SEMA6BQ9H3T3 888 aa15.58■□□□□ 0.08
HMGXB4-204ENST00000455359 ASB7Q9H672 318 aa15.58■□□□□ 0.08
HMGXB4-204ENST00000455359 RPF1Q9H9Y2 349 aaKnown RBP15.58■□□□□ 0.08
HMGXB4-204ENST00000455359 ZNF233A6NK53 670 aa15.57■□□□□ 0.08
HMGXB4-204ENST00000455359 TBKBP1A7MCY6 615 aa15.57■□□□□ 0.08
HMGXB4-204ENST00000455359 IL18RAPO95256 599 aa15.57■□□□□ 0.08
HMGXB4-204ENST00000455359 KCNE1P15382 129 aa15.57■□□□□ 0.08
HMGXB4-204ENST00000455359 CD44P16070 742 aaKnown RBP15.57■□□□□ 0.08
HMGXB4-204ENST00000455359 ERCC5P28715 1186 aaPredicted RBP15.57■□□□□ 0.08
HMGXB4-204ENST00000455359 FKBP3Q00688 224 aaKnown RBP15.57■□□□□ 0.08
HMGXB4-204ENST00000455359 ENPEPQ07075 957 aa15.57■□□□□ 0.08
HMGXB4-204ENST00000455359 PAK1Q13153 545 aa15.57■□□□□ 0.08
HMGXB4-204ENST00000455359 BTG3Q14201 252 aaPredicted RBP15.57■□□□□ 0.08
HMGXB4-204ENST00000455359 SURF1Q15526 300 aa15.57■□□□□ 0.08
HMGXB4-204ENST00000455359 SLC10A6Q3KNW5 377 aa15.57■□□□□ 0.08
HMGXB4-204ENST00000455359 ISM2Q6H9L7 571 aa15.57■□□□□ 0.08
HMGXB4-204ENST00000455359 FAM117BQ6P1L5 589 aa15.57■□□□□ 0.08
HMGXB4-204ENST00000455359 NT5DC4Q86YG4 428 aa15.57■□□□□ 0.08
HMGXB4-204ENST00000455359 FIBCD1Q8N539 461 aa15.57■□□□□ 0.08
HMGXB4-204ENST00000455359 CEP120Q8N960 986 aa15.57■□□□□ 0.08
HMGXB4-204ENST00000455359 HELQQ8TDG4 1101 aa15.57■□□□□ 0.08
HMGXB4-204ENST00000455359 SNX27Q96L92 541 aa15.57■□□□□ 0.08
HMGXB4-204ENST00000455359 RPS6KC1Q96S38 1066 aa15.57■□□□□ 0.08
HMGXB4-204ENST00000455359 GAD1Q99259 594 aa15.57■□□□□ 0.08
HMGXB4-204ENST00000455359 FAM213AQ9BRX8 229 aa15.57■□□□□ 0.08
HMGXB4-204ENST00000455359 APOL6Q9BWW8 343 aa15.57■□□□□ 0.08
HMGXB4-204ENST00000455359 SLC38A7Q9NVC3 462 aa15.57■□□□□ 0.08
HMGXB4-204ENST00000455359 ANO10Q9NW15 660 aa15.57■□□□□ 0.08
HMGXB4-204ENST00000455359 CNTN3Q9P232 1028 aa15.57■□□□□ 0.08
HMGXB4-204ENST00000455359 DERAQ9Y315 318 aa15.57■□□□□ 0.08
HMGXB4-204ENST00000455359 RWDD3Q9Y3V2 267 aa15.57■□□□□ 0.08
HMGXB4-204ENST00000455359 TMEM265A0A087WTH1 108 aa15.56■□□□□ 0.08
HMGXB4-204ENST00000455359 TTC26A0AVF1 554 aa15.56■□□□□ 0.08
HMGXB4-204ENST00000455359 MEIS3P2A8K0S8 358 aa15.56■□□□□ 0.08
HMGXB4-204ENST00000455359 CETN3O15182 167 aa15.56■□□□□ 0.08
HMGXB4-204ENST00000455359 EXOC3O60645 756 aa15.56■□□□□ 0.08
HMGXB4-204ENST00000455359 IBSPP21815 317 aaPredicted RBP15.56■□□□□ 0.08
HMGXB4-204ENST00000455359 MLH1P40692 756 aa15.56■□□□□ 0.08
HMGXB4-204ENST00000455359 ACOT2P49753 483 aa15.56■□□□□ 0.08
HMGXB4-204ENST00000455359 OSTNP61366 133 aa15.56■□□□□ 0.08
HMGXB4-204ENST00000455359 PPP2R3AQ06190 1150 aa15.56■□□□□ 0.08
HMGXB4-204ENST00000455359 GRIK3Q13003 919 aa15.56■□□□□ 0.08
HMGXB4-204ENST00000455359 ENOX2Q16206 610 aaKnown RBP15.56■□□□□ 0.08
HMGXB4-204ENST00000455359 STX1AQ16623 288 aa15.56■□□□□ 0.08
HMGXB4-204ENST00000455359 FAM109BQ6ICB4 259 aaPredicted RBP15.56■□□□□ 0.08
HMGXB4-204ENST00000455359 CRELD2Q6UXH1 353 aaPredicted RBP15.56■□□□□ 0.08
HMGXB4-204ENST00000455359 TMCO2Q7Z6W1 182 aaPredicted RBP15.56■□□□□ 0.08
HMGXB4-204ENST00000455359 BRSK2Q8IWQ3 736 aa15.56■□□□□ 0.08
HMGXB4-204ENST00000455359 ZC3H3Q8IXZ2 948 aaKnown RBP15.56■□□□□ 0.08
HMGXB4-204ENST00000455359 GSTCDQ8NEC7 633 aa15.56■□□□□ 0.08
HMGXB4-204ENST00000455359 NELFBQ8WX92 580 aa15.56■□□□□ 0.08
HMGXB4-204ENST00000455359 MKNK1Q9BUB5 465 aa15.56■□□□□ 0.08
HMGXB4-204ENST00000455359 PBX4Q9BYU1 374 aa15.56■□□□□ 0.08
HMGXB4-204ENST00000455359 PCIF1Q9H4Z3 704 aa15.56■□□□□ 0.08
HMGXB4-204ENST00000455359 RWDD2AQ9UIY3 292 aa15.56■□□□□ 0.08
HMGXB4-204ENST00000455359 FRMD4BQ9Y2L6 1034 aa15.56■□□□□ 0.08
HMGXB4-204ENST00000455359 COL4A6Q14031 1691 aa15.56■□□□□ 0.08
HMGXB4-204ENST00000455359 MYH11P35749 1972 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms