RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 C4orf32Q8N8J7 132 aa23.81■■□□□ 1.4
C9orf3-208ENST00000451893 KIFC3Q9BVG8 833 aa23.81■■□□□ 1.4
C9orf3-208ENST00000451893 PDZD7Q9H5P4 517 aa23.81■■□□□ 1.4
C9orf3-208ENST00000451893 POLD4Q9HCU8 107 aa23.81■■□□□ 1.4
C9orf3-208ENST00000451893 SNTG2Q9NY99 539 aa23.81■■□□□ 1.4
C9orf3-208ENST00000451893 CDH22Q9UJ99 828 aa23.81■■□□□ 1.4
C9orf3-208ENST00000451893 ARIH1Q9Y4X5 557 aaPredicted RBP23.81■■□□□ 1.4
C9orf3-208ENST00000451893 TMEM221A6NGB7 291 aa23.8■■□□□ 1.4
C9orf3-208ENST00000451893 K7ERI5 159 aa23.8■■□□□ 1.4
C9orf3-208ENST00000451893 M0R296 226 aa23.8■■□□□ 1.4
C9orf3-208ENST00000451893 CLCN4P51793 760 aa23.8■■□□□ 1.4
C9orf3-208ENST00000451893 RESTQ13127 1097 aa23.8■■□□□ 1.4
C9orf3-208ENST00000451893 FUT10Q6P4F1 479 aa23.8■■□□□ 1.4
C9orf3-208ENST00000451893 TRIM67Q6ZTA4 783 aa23.8■■□□□ 1.4
C9orf3-208ENST00000451893 HFE2Q6ZVN8 426 aa23.8■■□□□ 1.4
C9orf3-208ENST00000451893 BRAPQ7Z569 592 aa23.8■■□□□ 1.4
C9orf3-208ENST00000451893 IGSF22Q8N9C0 903 aa23.8■■□□□ 1.4
C9orf3-208ENST00000451893 SLC22A17Q8WUG5 538 aa23.8■■□□□ 1.4
C9orf3-208ENST00000451893 PBXIP1Q96AQ6 731 aa23.8■■□□□ 1.4
C9orf3-208ENST00000451893 DRC1Q96MC2 740 aa23.8■■□□□ 1.4
C9orf3-208ENST00000451893 ADAM28Q9UKQ2 775 aa23.8■■□□□ 1.4
C9orf3-208ENST00000451893 GDAQ9Y2T3 454 aa23.8■■□□□ 1.4
C9orf3-208ENST00000451893 PP2D1A8MPX8 630 aa23.79■■□□□ 1.4
C9orf3-208ENST00000451893 E9PMD0 336 aa23.79■■□□□ 1.4
C9orf3-208ENST00000451893 GLUD1P00367 558 aa23.79■■□□□ 1.4
C9orf3-208ENST00000451893 THP07101 528 aa23.79■■□□□ 1.4
C9orf3-208ENST00000451893 PEX3P56589 373 aa23.79■■□□□ 1.4
C9orf3-208ENST00000451893 CREMQ03060 361 aa23.79■■□□□ 1.4
C9orf3-208ENST00000451893 PTPN21Q16825 1174 aa23.79■■□□□ 1.4
C9orf3-208ENST00000451893 USP41Q3LFD5 358 aa23.79■■□□□ 1.4
C9orf3-208ENST00000451893 CCDC149Q6ZUS6 474 aa23.79■■□□□ 1.4
C9orf3-208ENST00000451893 ACSF2Q96CM8 615 aaPredicted RBP23.79■■□□□ 1.4
C9orf3-208ENST00000451893 MAN1C1Q9NR34 630 aa23.79■■□□□ 1.4
C9orf3-208ENST00000451893 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.79■■□□□ 1.4
C9orf3-208ENST00000451893 SF3B1O75533 1304 aaKnown RBP eCLIP23.79■■□□□ 1.44e-6■■■■■ 135.1
C9orf3-208ENST00000451893 MYH11P35749 1972 aa23.78■■□□□ 1.4
C9orf3-208ENST00000451893 CASTOR2A6NHX0 329 aa23.78■■□□□ 1.4
C9orf3-208ENST00000451893 RECQL4O94761 1208 aa23.78■■□□□ 1.4
C9orf3-208ENST00000451893 CDC25AP30304 524 aa23.78■■□□□ 1.4
C9orf3-208ENST00000451893 KRT85P78386 507 aa23.78■■□□□ 1.4
C9orf3-208ENST00000451893 SIGLEC14Q08ET2 396 aa23.78■■□□□ 1.4
C9orf3-208ENST00000451893 TUSC3Q13454 348 aa23.78■■□□□ 1.4
C9orf3-208ENST00000451893 HSP90AA2PQ14568 343 aaPredicted RBP23.78■■□□□ 1.4
C9orf3-208ENST00000451893 ATF7IP2Q5U623 682 aa23.78■■□□□ 1.4
C9orf3-208ENST00000451893 KANK3Q6NY19 840 aa23.78■■□□□ 1.4
C9orf3-208ENST00000451893 GLYCTKQ8IVS8 523 aa23.78■■□□□ 1.4
C9orf3-208ENST00000451893 RABGGTAQ92696 567 aa23.78■■□□□ 1.4
C9orf3-208ENST00000451893 KMT5AQ9NQR1 393 aa23.78■■□□□ 1.4
C9orf3-208ENST00000451893 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.78■■□□□ 1.4
C9orf3-208ENST00000451893 CFAP45Q9UL16 551 aa23.78■■□□□ 1.4
C9orf3-208ENST00000451893 PHLPP2Q6ZVD8 1323 aa23.78■■□□□ 1.4
C9orf3-208ENST00000451893 VWA3AA6NCI4 1184 aa23.77■■□□□ 1.4
C9orf3-208ENST00000451893 C2CD4DB7Z1M9 353 aa23.77■■□□□ 1.4
C9orf3-208ENST00000451893 YARSP54577 528 aaKnown RBP23.77■■□□□ 1.4
C9orf3-208ENST00000451893 TAS1R1Q7RTX1 841 aa23.77■■□□□ 1.4
C9orf3-208ENST00000451893 CEP57Q86XR8 500 aa23.77■■□□□ 1.4
C9orf3-208ENST00000451893 PLCD3Q8N3E9 789 aa23.77■■□□□ 1.4
C9orf3-208ENST00000451893 RASSF8Q8NHQ8 419 aa23.77■■□□□ 1.4
C9orf3-208ENST00000451893 HASPINQ8TF76 798 aa23.77■■□□□ 1.4
C9orf3-208ENST00000451893 RIN2Q8WYP3 895 aaPredicted RBP23.77■■□□□ 1.4
C9orf3-208ENST00000451893 ZNF396Q96N95 335 aaPredicted RBP23.77■■□□□ 1.4
C9orf3-208ENST00000451893 ANP32EQ9BTT0 268 aa23.77■■□□□ 1.4
C9orf3-208ENST00000451893 SCAND2PQ9GZW5 306 aaPredicted RBP23.77■■□□□ 1.4
C9orf3-208ENST00000451893 CCDC113Q9H0I3 377 aa23.77■■□□□ 1.4
C9orf3-208ENST00000451893 NT5C3AQ9H0P0 336 aa23.77■■□□□ 1.4
C9orf3-208ENST00000451893 USP20Q9Y2K6 914 aa23.77■■□□□ 1.4
C9orf3-208ENST00000451893 TEX28O15482 410 aa23.76■■□□□ 1.39
C9orf3-208ENST00000451893 HIP1RO75146 1068 aa23.76■■□□□ 1.39
C9orf3-208ENST00000451893 MYBP10242 640 aa23.76■■□□□ 1.39
C9orf3-208ENST00000451893 DSG1Q02413 1049 aa23.76■■□□□ 1.39
C9orf3-208ENST00000451893 MTMR3Q13615 1198 aa23.76■■□□□ 1.39
C9orf3-208ENST00000451893 TCHPQ9BT92 498 aa23.76■■□□□ 1.39
C9orf3-208ENST00000451893 PIDD1Q9HB75 910 aa23.76■■□□□ 1.39
C9orf3-208ENST00000451893 PLXNA3P51805 1871 aa23.75■■□□□ 1.39
C9orf3-208ENST00000451893 TTLL13PA6NNM8 815 aa23.75■■□□□ 1.39
C9orf3-208ENST00000451893 F8W810 466 aa23.75■■□□□ 1.39
C9orf3-208ENST00000451893 ATP2C1P98194 919 aaPredicted RBP23.75■■□□□ 1.39
C9orf3-208ENST00000451893 ZNF568Q3ZCX4 644 aa23.75■■□□□ 1.39
C9orf3-208ENST00000451893 GPR149Q86SP6 731 aa23.75■■□□□ 1.39
C9orf3-208ENST00000451893 PALB2Q86YC2 1186 aa23.75■■□□□ 1.39
C9orf3-208ENST00000451893 KREMEN2Q8NCW0 462 aa23.75■■□□□ 1.39
C9orf3-208ENST00000451893 GSTCDQ8NEC7 633 aa23.75■■□□□ 1.39
C9orf3-208ENST00000451893 B3GALT6Q96L58 329 aa23.75■■□□□ 1.39
C9orf3-208ENST00000451893 PLIN2Q99541 437 aa23.75■■□□□ 1.39
C9orf3-208ENST00000451893 CCDC94Q9BW85 323 aaPredicted RBP23.75■■□□□ 1.39
C9orf3-208ENST00000451893 MRPL4Q9BYD3 311 aaKnown RBP23.75■■□□□ 1.39
C9orf3-208ENST00000451893 SMTNP53814 917 aa23.74■■□□□ 1.39
C9orf3-208ENST00000451893 ELAVL2Q12926 359 aaKnown RBP23.74■■□□□ 1.39
C9orf3-208ENST00000451893 STRN3Q13033 797 aa23.74■■□□□ 1.39
C9orf3-208ENST00000451893 EEF1DP3Q658K8 133 aa23.74■■□□□ 1.39
C9orf3-208ENST00000451893 C15orf39Q6ZRI6 1047 aa23.74■■□□□ 1.39
C9orf3-208ENST00000451893 OTOP3Q7RTS5 596 aa23.74■■□□□ 1.39
C9orf3-208ENST00000451893 TIPINQ9BVW5 301 aa23.74■■□□□ 1.39
C9orf3-208ENST00000451893 GPR62Q9BZJ7 368 aa23.74■■□□□ 1.39
C9orf3-208ENST00000451893 TOPORSQ9NS56 1045 aaPredicted RBP23.74■■□□□ 1.39
C9orf3-208ENST00000451893 CACNG4Q9UBN1 327 aa23.74■■□□□ 1.39
C9orf3-208ENST00000451893 KCNG1Q9UIX4 513 aa23.74■■□□□ 1.39
C9orf3-208ENST00000451893 SORCS3Q9UPU3 1222 aa23.74■■□□□ 1.39
C9orf3-208ENST00000451893 TECTAO75443 2155 aa23.74■■□□□ 1.39
C9orf3-208ENST00000451893 MYO10Q9HD67 2058 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms