RNA–Protein interactions for RNA: ENST00000445692.5

APLF-203, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 5

Gene APLF, Length 3,906 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-203ENST00000445692 KRT10P13645 584 aa12.84□□□□□ -0.35
APLF-203ENST00000445692 EIF2AK2P19525 551 aaKnown RBP12.84□□□□□ -0.35
APLF-203ENST00000445692 GIT2Q14161 759 aa12.84□□□□□ -0.35
APLF-203ENST00000445692 MIGA2Q7L4E1 593 aa12.84□□□□□ -0.35
APLF-203ENST00000445692 AGR3Q8TD06 166 aa12.84□□□□□ -0.35
APLF-203ENST00000445692 MAIP1Q8WWC4 291 aa12.84□□□□□ -0.35
APLF-203ENST00000445692 SYN2Q92777 582 aaPredicted RBP12.84□□□□□ -0.35
APLF-203ENST00000445692 SNF8Q96H20 258 aa12.84□□□□□ -0.35
APLF-203ENST00000445692 NACC1Q96RE7 527 aa12.84□□□□□ -0.35
APLF-203ENST00000445692 PCSK1NQ9UHG2 260 aa12.84□□□□□ -0.35
APLF-203ENST00000445692 TCRBV7S2A1N4TA0A589 114 aa12.83□□□□□ -0.35
APLF-203ENST00000445692 E2F8A0AVK6 867 aa12.83□□□□□ -0.35
APLF-203ENST00000445692 H7C0C1 242 aa12.83□□□□□ -0.35
APLF-203ENST00000445692 RIPK2O43353 540 aa12.83□□□□□ -0.35
APLF-203ENST00000445692 ZBED4O75132 1171 aa12.83□□□□□ -0.35
APLF-203ENST00000445692 PPFIA2O75334 1257 aa12.83□□□□□ -0.35
APLF-203ENST00000445692 ATP5OP48047 213 aa12.83□□□□□ -0.35
APLF-203ENST00000445692 ARSEP51690 589 aa12.83□□□□□ -0.35
APLF-203ENST00000445692 RCN1Q15293 331 aa12.83□□□□□ -0.35
APLF-203ENST00000445692 PADI6Q6TGC4 694 aa12.83□□□□□ -0.35
APLF-203ENST00000445692 FAM196AQ6ZSG2 479 aa12.83□□□□□ -0.35
APLF-203ENST00000445692 ZNF513Q8N8E2 541 aaPredicted RBP12.83□□□□□ -0.35
APLF-203ENST00000445692 SUDS3Q9H7L9 328 aaPredicted RBP12.83□□□□□ -0.35
APLF-203ENST00000445692 LRRIQ4A6NIV6 560 aa12.83□□□□□ -0.36
APLF-203ENST00000445692 F5H6K3 240 aa12.83□□□□□ -0.36
APLF-203ENST00000445692 DCTN3O75935 186 aa12.83□□□□□ -0.36
APLF-203ENST00000445692 RALAP11233 206 aa12.83□□□□□ -0.36
APLF-203ENST00000445692 KCNA3P22001 575 aa12.83□□□□□ -0.36
APLF-203ENST00000445692 LIG4P49917 911 aa12.83□□□□□ -0.36
APLF-203ENST00000445692 PTENP60484 403 aa12.83□□□□□ -0.36
APLF-203ENST00000445692 KLRC3Q07444 240 aa12.83□□□□□ -0.36
APLF-203ENST00000445692 CBWD6Q4V339 395 aa12.83□□□□□ -0.36
APLF-203ENST00000445692 CBWD3Q5JTY5 395 aa12.83□□□□□ -0.36
APLF-203ENST00000445692 CBWD5Q5RIA9 395 aa12.83□□□□□ -0.36
APLF-203ENST00000445692 GSDMBQ8TAX9 411 aa12.83□□□□□ -0.36
APLF-203ENST00000445692 DDX27Q96GQ7 796 aaKnown RBP12.83□□□□□ -0.36
APLF-203ENST00000445692 RBM17Q96I25 401 aaKnown RBP12.83□□□□□ -0.36
APLF-203ENST00000445692 PHRF1Q9P1Y6 1649 aaKnown RBP12.83□□□□□ -0.36
APLF-203ENST00000445692 ABCB11O95342 1321 aa12.83□□□□□ -0.36
APLF-203ENST00000445692 SNX3O60493 162 aa12.83□□□□□ -0.36
APLF-203ENST00000445692 ENTPD5O75356 428 aa12.83□□□□□ -0.36
APLF-203ENST00000445692 RASSF9O75901 435 aa12.83□□□□□ -0.36
APLF-203ENST00000445692 MAP3K6O95382 1288 aa12.83□□□□□ -0.36
APLF-203ENST00000445692 GJB6O95452 261 aa12.83□□□□□ -0.36
APLF-203ENST00000445692 RARAP10276 462 aa12.83□□□□□ -0.36
APLF-203ENST00000445692 ARFIP2P53365 341 aa12.83□□□□□ -0.36
APLF-203ENST00000445692 TMPRSS15P98073 1019 aa12.83□□□□□ -0.36
APLF-203ENST00000445692 PDE1CQ14123 709 aaPredicted RBP12.83□□□□□ -0.36
APLF-203ENST00000445692 EDRF1Q3B7T1 1238 aa12.83□□□□□ -0.36
APLF-203ENST00000445692 TMEM270Q6UE05 265 aa12.83□□□□□ -0.36
APLF-203ENST00000445692 RNF168Q8IYW5 571 aaPredicted RBP12.83□□□□□ -0.36
APLF-203ENST00000445692 XXYLT1Q8NBI6 393 aa12.83□□□□□ -0.36
APLF-203ENST00000445692 SCFD2Q8WU76 684 aa12.83□□□□□ -0.36
APLF-203ENST00000445692 SPOCK2Q92563 424 aa12.83□□□□□ -0.36
APLF-203ENST00000445692 GINS2Q9Y248 185 aa12.83□□□□□ -0.36
APLF-203ENST00000445692 CDH16O75309 829 aa12.82□□□□□ -0.36
APLF-203ENST00000445692 GPSM2P81274 684 aa12.82□□□□□ -0.36
APLF-203ENST00000445692 BRDTQ58F21 947 aaPredicted RBP12.82□□□□□ -0.36
APLF-203ENST00000445692 SYDE2Q5VT97 1194 aa12.82□□□□□ -0.36
APLF-203ENST00000445692 LVRNQ6Q4G3 990 aa12.82□□□□□ -0.36
APLF-203ENST00000445692 EGFL6Q8IUX8 553 aa12.82□□□□□ -0.36
APLF-203ENST00000445692 LNX1Q8TBB1 728 aaPredicted RBP12.82□□□□□ -0.36
APLF-203ENST00000445692 TBC1D22AQ8WUA7 517 aa12.82□□□□□ -0.36
APLF-203ENST00000445692 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.82□□□□□ -0.361e-6■■■■■ 56.2
APLF-203ENST00000445692 SLC35C1Q96A29 364 aa12.82□□□□□ -0.36
APLF-203ENST00000445692 DNAJC19Q96DA6 116 aa12.82□□□□□ -0.36
APLF-203ENST00000445692 ACCSQ96QU6 501 aa12.82□□□□□ -0.36
APLF-203ENST00000445692 ZSWIM1Q9BR11 485 aa12.82□□□□□ -0.36
APLF-203ENST00000445692 FAM213AQ9BRX8 229 aa12.82□□□□□ -0.36
APLF-203ENST00000445692 LXNQ9BS40 222 aa12.82□□□□□ -0.36
APLF-203ENST00000445692 TRIM55Q9BYV6 548 aa12.82□□□□□ -0.36
APLF-203ENST00000445692 C10orf88Q9H8K7 445 aa12.82□□□□□ -0.36
APLF-203ENST00000445692 PHTF1Q9UMS5 762 aa12.82□□□□□ -0.36
APLF-203ENST00000445692 PITPNM2Q9BZ72 1349 aa12.82□□□□□ -0.36
APLF-203ENST00000445692 IGSF9BQ9UPX0 1349 aa12.82□□□□□ -0.36
APLF-203ENST00000445692 RGPD5Q99666 1765 aa12.82□□□□□ -0.36
APLF-203ENST00000445692 FAM47DPA6NHR8 397 aa12.82□□□□□ -0.36
APLF-203ENST00000445692 NVLO15381 856 aaKnown RBP12.82□□□□□ -0.36
APLF-203ENST00000445692 SNUPNO95149 360 aaKnown RBP12.82□□□□□ -0.36
APLF-203ENST00000445692 PSMC4P43686 418 aa12.82□□□□□ -0.36
APLF-203ENST00000445692 NBPF20Q3BBV1 942 aa12.82□□□□□ -0.36
APLF-203ENST00000445692 C1orf146Q5VVC0 180 aa12.82□□□□□ -0.36
APLF-203ENST00000445692 BZW1Q7L1Q6 419 aaKnown RBP12.82□□□□□ -0.36
APLF-203ENST00000445692 IRF2BP2Q7Z5L9 587 aa12.82□□□□□ -0.36
APLF-203ENST00000445692 YTHDF3Q7Z739 585 aaKnown RBP12.82□□□□□ -0.36
APLF-203ENST00000445692 CD302Q8IX05 232 aa12.82□□□□□ -0.36
APLF-203ENST00000445692 SLC25A41Q8N5S1 370 aa12.82□□□□□ -0.36
APLF-203ENST00000445692 FGD4Q96M96 766 aa12.82□□□□□ -0.36
APLF-203ENST00000445692 DDX50Q9BQ39 737 aaKnown RBP12.82□□□□□ -0.36
APLF-203ENST00000445692 CBWD1Q9BRT8 395 aa12.82□□□□□ -0.36
APLF-203ENST00000445692 LRRC4CQ9HCJ2 640 aa12.82□□□□□ -0.36
APLF-203ENST00000445692 BATF3Q9NR55 127 aa12.82□□□□□ -0.36
APLF-203ENST00000445692 CHST7Q9NS84 486 aa12.82□□□□□ -0.36
APLF-203ENST00000445692 ZFATQ9P243 1243 aa12.82□□□□□ -0.36
APLF-203ENST00000445692 AGAP1Q9UPQ3 857 aa12.82□□□□□ -0.36
APLF-203ENST00000445692 NAALADL1Q9UQQ1 740 aa12.82□□□□□ -0.36
APLF-203ENST00000445692 ZC3H4Q9UPT8 1303 aaKnown RBP12.82□□□□□ -0.36
APLF-203ENST00000445692 CFLARO15519 480 aa12.82□□□□□ -0.36
APLF-203ENST00000445692 RFC5P40937 340 aa12.82□□□□□ -0.36
APLF-203ENST00000445692 TRPC3Q13507 836 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms