RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 UHRF1Q96T88 793 aaPredicted RBP5.7□□□□□ -1.5
PTPN4-203ENST00000430976 CIB1Q99828 191 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 FBRSL1Q9HCM7 1045 aaKnown RBP5.7□□□□□ -1.5
PTPN4-203ENST00000430976 ZBTB40Q9NUA8 1239 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 LMBRD1Q9NUN5 540 aa5.7□□□□□ -1.5
PTPN4-203ENST00000430976 MBD1Q9UIS9 605 aaPredicted RBP5.7□□□□□ -1.5
PTPN4-203ENST00000430976 PACSIN2Q9UNF0 486 aaPredicted RBP5.7□□□□□ -1.5
PTPN4-203ENST00000430976 GPRASP1Q5JY77 1395 aa5.69□□□□□ -1.5
PTPN4-203ENST00000430976 GCOM1H8Y6P7 765 aaPredicted RBP5.69□□□□□ -1.5
PTPN4-203ENST00000430976 PDE8AO60658 829 aa5.69□□□□□ -1.5
PTPN4-203ENST00000430976 ARHGEF15O94989 841 aa5.69□□□□□ -1.5
PTPN4-203ENST00000430976 SFTPCP11686 197 aa5.69□□□□□ -1.5
PTPN4-203ENST00000430976 CCND1P24385 295 aa5.69□□□□□ -1.5
PTPN4-203ENST00000430976 ATP5F1P24539 256 aaPredicted RBP5.69□□□□□ -1.5
PTPN4-203ENST00000430976 FXR1P51114 621 aaKnown RBP eCLIP5.69□□□□□ -1.5
PTPN4-203ENST00000430976 MAPK10P53779 464 aa5.69□□□□□ -1.5
PTPN4-203ENST00000430976 SCAND1P57086 179 aa5.69□□□□□ -1.5
PTPN4-203ENST00000430976 PHC1P78364 1004 aa5.69□□□□□ -1.5
PTPN4-203ENST00000430976 E2F2Q14209 437 aa5.69□□□□□ -1.5
PTPN4-203ENST00000430976 MXD4Q14582 209 aaPredicted RBP5.69□□□□□ -1.5
PTPN4-203ENST00000430976 C1orf141Q5JVX7 400 aa5.69□□□□□ -1.5
PTPN4-203ENST00000430976 SCYL2Q6P3W7 929 aa5.69□□□□□ -1.5
PTPN4-203ENST00000430976 TMC4Q7Z404 712 aa5.69□□□□□ -1.5
PTPN4-203ENST00000430976 SUPT20HQ8NEM7 779 aa5.69□□□□□ -1.5
PTPN4-203ENST00000430976 ASB12Q8WXK4 309 aa5.69□□□□□ -1.5
PTPN4-203ENST00000430976 CPT1BQ92523 772 aa5.69□□□□□ -1.5
PTPN4-203ENST00000430976 TUBGCP3Q96CW5 907 aa5.69□□□□□ -1.5
PTPN4-203ENST00000430976 RRP36Q96EU6 259 aaKnown RBP5.69□□□□□ -1.5
PTPN4-203ENST00000430976 NAF1Q96HR8 494 aaKnown RBP5.69□□□□□ -1.5
PTPN4-203ENST00000430976 FRMD8Q9BZ67 464 aaPredicted RBP5.69□□□□□ -1.5
PTPN4-203ENST00000430976 COX16Q9P0S2 106 aa5.69□□□□□ -1.5
PTPN4-203ENST00000430976 HMG20BQ9P0W2 317 aa5.69□□□□□ -1.5
PTPN4-203ENST00000430976 CNOT7Q9UIV1 285 aaKnown RBP5.69□□□□□ -1.5
PTPN4-203ENST00000430976 APPL1Q9UKG1 709 aa5.69□□□□□ -1.5
PTPN4-203ENST00000430976 CORO1CQ9ULV4 474 aaPredicted RBP5.69□□□□□ -1.5
PTPN4-203ENST00000430976 PCDHB9Q9Y5E1 797 aa5.69□□□□□ -1.5
PTPN4-203ENST00000430976 A0A0G2JS52 829 aa5.69□□□□□ -1.5
PTPN4-203ENST00000430976 TNFRSF10AO00220 468 aa5.69□□□□□ -1.5
PTPN4-203ENST00000430976 SCAMP1O15126 338 aa5.69□□□□□ -1.5
PTPN4-203ENST00000430976 SLC7A4O43246 635 aa5.69□□□□□ -1.5
PTPN4-203ENST00000430976 ZC3H11AO75152 810 aaKnown RBP eCLIP5.69□□□□□ -1.5
PTPN4-203ENST00000430976 CHEK2O96017 543 aa5.69□□□□□ -1.5
PTPN4-203ENST00000430976 HMOX2P30519 316 aa5.69□□□□□ -1.5
PTPN4-203ENST00000430976 METTL21CQ5VZV1 264 aa5.69□□□□□ -1.5
PTPN4-203ENST00000430976 LUZP2Q86TE4 346 aa5.69□□□□□ -1.5
PTPN4-203ENST00000430976 LONP2Q86WA8 852 aa5.69□□□□□ -1.5
PTPN4-203ENST00000430976 ANKFN1Q8N957 763 aa5.69□□□□□ -1.5
PTPN4-203ENST00000430976 ZSCAN1Q8NBB4 408 aa5.69□□□□□ -1.5
PTPN4-203ENST00000430976 ZBTB44Q8NCP5 570 aa5.69□□□□□ -1.5
PTPN4-203ENST00000430976 OR52K2Q8NGK3 314 aa5.69□□□□□ -1.5
PTPN4-203ENST00000430976 CAPZA3Q96KX2 299 aa5.69□□□□□ -1.5
PTPN4-203ENST00000430976 CAMK1GQ96NX5 476 aa5.69□□□□□ -1.5
PTPN4-203ENST00000430976 LBHD1Q9BQE6 289 aaPredicted RBP5.69□□□□□ -1.5
PTPN4-203ENST00000430976 MYLK2Q9H1R3 596 aa5.69□□□□□ -1.5
PTPN4-203ENST00000430976 KCNQ5Q9NR82 932 aa5.69□□□□□ -1.5
PTPN4-203ENST00000430976 GPC6Q9Y625 555 aaPredicted RBP5.69□□□□□ -1.5
PTPN4-203ENST00000430976 TK2O00142 265 aa5.69□□□□□ -1.5
PTPN4-203ENST00000430976 N4BP3O15049 544 aa5.69□□□□□ -1.5
PTPN4-203ENST00000430976 ADCY3O60266 1144 aa5.69□□□□□ -1.5
PTPN4-203ENST00000430976 P4HBP07237 508 aaKnown RBP5.69□□□□□ -1.5
PTPN4-203ENST00000430976 EEF1GP26641 437 aaKnown RBP5.69□□□□□ -1.5
PTPN4-203ENST00000430976 THOP1P52888 689 aa5.69□□□□□ -1.5
PTPN4-203ENST00000430976 EPHB1P54762 984 aa5.69□□□□□ -1.5
PTPN4-203ENST00000430976 GSDMDP57764 484 aa5.69□□□□□ -1.5
PTPN4-203ENST00000430976 SNW1Q13573 536 aaKnown RBP5.69□□□□□ -1.5
PTPN4-203ENST00000430976 TSTA3Q13630 321 aaPredicted RBP5.69□□□□□ -1.5
PTPN4-203ENST00000430976 COG2Q14746 738 aa5.69□□□□□ -1.5
PTPN4-203ENST00000430976 FAM47CQ5HY64 1035 aa5.69□□□□□ -1.5
PTPN4-203ENST00000430976 FYB2Q5VWT5 728 aa5.69□□□□□ -1.5
PTPN4-203ENST00000430976 TATDN1Q6P1N9 297 aa5.69□□□□□ -1.5
PTPN4-203ENST00000430976 ZNF704Q6ZNC4 412 aaPredicted RBP5.69□□□□□ -1.5
PTPN4-203ENST00000430976 PLA2G4DQ86XP0 818 aa5.69□□□□□ -1.5
PTPN4-203ENST00000430976 TMTC1Q8IUR5 882 aa5.69□□□□□ -1.5
PTPN4-203ENST00000430976 CD302Q8IX05 232 aa5.69□□□□□ -1.5
PTPN4-203ENST00000430976 CBARPQ8N350 705 aaPredicted RBP5.69□□□□□ -1.5
PTPN4-203ENST00000430976 LNX2Q8N448 690 aa5.69□□□□□ -1.5
PTPN4-203ENST00000430976 SHCBP1Q8NEM2 672 aa5.69□□□□□ -1.5
PTPN4-203ENST00000430976 MOSPD2Q8NHP6 518 aa5.69□□□□□ -1.5
PTPN4-203ENST00000430976 USP13Q92995 863 aaPredicted RBP5.69□□□□□ -1.5
PTPN4-203ENST00000430976 PSD2Q9BQI7 771 aa5.69□□□□□ -1.5
PTPN4-203ENST00000430976 EVA1AQ9H8M9 152 aa5.69□□□□□ -1.5
PTPN4-203ENST00000430976 COG4Q9H9E3 785 aa5.69□□□□□ -1.5
PTPN4-203ENST00000430976 KIAA1586Q9HCI6 787 aa5.69□□□□□ -1.5
PTPN4-203ENST00000430976 ZSWIM6Q9HCJ5 1215 aa5.69□□□□□ -1.5
PTPN4-203ENST00000430976 TRIM39Q9HCM9 518 aa5.69□□□□□ -1.5
PTPN4-203ENST00000430976 MRPL47Q9HD33 250 aaKnown RBP5.69□□□□□ -1.5
PTPN4-203ENST00000430976 RYDENQ9NUL5 291 aaKnown RBP5.69□□□□□ -1.5
PTPN4-203ENST00000430976 CCDC78A2IDD5 438 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 POTEB2H3BUK9 544 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 CRYZL1O95825 349 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 TBX18O95935 607 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 NPR1P16066 1061 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 ALOX12P18054 663 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 CFL1P23528 166 aaKnown RBP5.68□□□□□ -1.5
PTPN4-203ENST00000430976 GJC1P36383 396 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 ADARP55265 1226 aaKnown RBP5.68□□□□□ -1.5
PTPN4-203ENST00000430976 RACK1P63244 317 aaKnown RBP5.68□□□□□ -1.5
PTPN4-203ENST00000430976 PKP1Q13835 747 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 ABCB5Q2M3G0 1257 aa5.68□□□□□ -1.5
PTPN4-203ENST00000430976 USH1GQ495M9 461 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms