RNA–Protein interactions for RNA: ENST00000417268.3

SCAF8-203, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-203ENST00000417268 FBXL13Q8NEE6 735 aa13.65□□□□□ -0.22
SCAF8-203ENST00000417268 WDR18Q9BV38 432 aa13.65□□□□□ -0.22
SCAF8-203ENST00000417268 SLC16A3O15427 465 aaKnown RBP13.65□□□□□ -0.22
SCAF8-203ENST00000417268 IRAK1P51617 712 aa13.65□□□□□ -0.22
SCAF8-203ENST00000417268 EDRF1Q3B7T1 1238 aa13.65□□□□□ -0.22
SCAF8-203ENST00000417268 ERICH1Q86X53 443 aa13.65□□□□□ -0.22
SCAF8-203ENST00000417268 ELOA2Q8IYF1 753 aaPredicted RBP13.65□□□□□ -0.22
SCAF8-203ENST00000417268 BBOF1Q8ND07 529 aa13.65□□□□□ -0.22
SCAF8-203ENST00000417268 NLGN2Q8NFZ4 835 aa13.65□□□□□ -0.22
SCAF8-203ENST00000417268 GLTPD2A6NH11 291 aa13.65□□□□□ -0.22
SCAF8-203ENST00000417268 HNRNPH1P31943 449 aaKnown RBP13.65□□□□□ -0.22
SCAF8-203ENST00000417268 ADCY2Q08462 1091 aa13.65□□□□□ -0.22
SCAF8-203ENST00000417268 TMED2Q15363 201 aa13.65□□□□□ -0.22
SCAF8-203ENST00000417268 HPS3Q969F9 1004 aa13.65□□□□□ -0.22
SCAF8-203ENST00000417268 FUT8Q9BYC5 575 aa13.65□□□□□ -0.22
SCAF8-203ENST00000417268 PRMT7Q9NVM4 692 aaPredicted RBP13.65□□□□□ -0.22
SCAF8-203ENST00000417268 SLC12A6Q9UHW9 1150 aa13.65□□□□□ -0.22
SCAF8-203ENST00000417268 ZNF148Q9UQR1 794 aa13.65□□□□□ -0.22
SCAF8-203ENST00000417268 AP5Z1O43299 807 aa13.64□□□□□ -0.23
SCAF8-203ENST00000417268 NCK2O43639 380 aa13.64□□□□□ -0.23
SCAF8-203ENST00000417268 FKBP1BP68106 108 aa13.64□□□□□ -0.23
SCAF8-203ENST00000417268 ZNF394Q53GI3 561 aa13.64□□□□□ -0.23
SCAF8-203ENST00000417268 EFCAB12Q6NXP0 572 aa13.64□□□□□ -0.23
SCAF8-203ENST00000417268 KIF12Q96FN5 646 aa13.64□□□□□ -0.23
SCAF8-203ENST00000417268 ZNF560Q96MR9 790 aa13.64□□□□□ -0.23
SCAF8-203ENST00000417268 UBE4BO95155 1302 aa13.64□□□□□ -0.23
SCAF8-203ENST00000417268 IGSF9BQ9UPX0 1349 aa13.64□□□□□ -0.23
SCAF8-203ENST00000417268 CCDC188H7C350 402 aa13.64□□□□□ -0.23
SCAF8-203ENST00000417268 TRIM49P0CI25 452 aa13.64□□□□□ -0.23
SCAF8-203ENST00000417268 TRIM49CP0CI26 452 aa13.64□□□□□ -0.23
SCAF8-203ENST00000417268 CASC4Q6P4E1 433 aa13.64□□□□□ -0.23
SCAF8-203ENST00000417268 SPATA4Q8NEY3 305 aa13.64□□□□□ -0.23
SCAF8-203ENST00000417268 HSPBP1Q9NZL4 362 aa13.64□□□□□ -0.23
SCAF8-203ENST00000417268 EMSYQ7Z589 1322 aa13.64□□□□□ -0.23
SCAF8-203ENST00000417268 ZBBXA8MT70 800 aa13.64□□□□□ -0.23
SCAF8-203ENST00000417268 SLC26A2P50443 739 aa13.64□□□□□ -0.23
SCAF8-203ENST00000417268 SNRPFP62306 86 aaKnown RBP13.64□□□□□ -0.23
SCAF8-203ENST00000417268 RINT1Q6NUQ1 792 aa13.64□□□□□ -0.23
SCAF8-203ENST00000417268 CCT8L2Q96SF2 557 aa13.64□□□□□ -0.23
SCAF8-203ENST00000417268 LRRC1Q9BTT6 524 aa13.64□□□□□ -0.23
SCAF8-203ENST00000417268 EDEM3Q9BZQ6 932 aa13.64□□□□□ -0.23
SCAF8-203ENST00000417268 SLC38A10Q9HBR0 1119 aa13.64□□□□□ -0.23
SCAF8-203ENST00000417268 INTUQ9ULD6 942 aa13.64□□□□□ -0.23
SCAF8-203ENST00000417268 HPCAL4Q9UM19 191 aa13.64□□□□□ -0.23
SCAF8-203ENST00000417268 SCINQ9Y6U3 715 aa13.64□□□□□ -0.23
SCAF8-203ENST00000417268 A0A1W2PQC6 194 aa13.64□□□□□ -0.23
SCAF8-203ENST00000417268 TYW5A2RUC4 315 aaKnown RBP13.64□□□□□ -0.23
SCAF8-203ENST00000417268 EIF3DO15371 548 aaKnown RBP eCLIP13.64□□□□□ -0.23
SCAF8-203ENST00000417268 ECEL1O95672 775 aa13.64□□□□□ -0.23
SCAF8-203ENST00000417268 TOB1P50616 345 aaPredicted RBP13.64□□□□□ -0.23
SCAF8-203ENST00000417268 TSPY1Q01534 308 aa13.64□□□□□ -0.23
SCAF8-203ENST00000417268 GRIN1Q05586 938 aa13.64□□□□□ -0.23
SCAF8-203ENST00000417268 SNX1Q13596 522 aa13.64□□□□□ -0.23
SCAF8-203ENST00000417268 TMEM270Q6UE05 265 aa13.64□□□□□ -0.23
SCAF8-203ENST00000417268 ATP2A3Q93084 1043 aa13.64□□□□□ -0.23
SCAF8-203ENST00000417268 INTS2Q9H0H0 1204 aaKnown RBP13.64□□□□□ -0.23
SCAF8-203ENST00000417268 EPN3Q9H201 632 aa13.64□□□□□ -0.23
SCAF8-203ENST00000417268 ZBTB24O43167 697 aaPredicted RBP13.63□□□□□ -0.23
SCAF8-203ENST00000417268 FGGP02679 453 aa13.63□□□□□ -0.23
SCAF8-203ENST00000417268 SUPT20HL2P0C7V6 817 aa13.63□□□□□ -0.23
SCAF8-203ENST00000417268 GEN1Q17RS7 908 aa13.63□□□□□ -0.23
SCAF8-203ENST00000417268 ZC3H18Q86VM9 953 aaKnown RBP13.63□□□□□ -0.23
SCAF8-203ENST00000417268 RHOT2Q8IXI1 618 aa13.63□□□□□ -0.23
SCAF8-203ENST00000417268 TAB3Q8N5C8 712 aaPredicted RBP13.63□□□□□ -0.23
SCAF8-203ENST00000417268 RNF139Q8WU17 664 aa13.63□□□□□ -0.23
SCAF8-203ENST00000417268 FAM217BQ9NTX9 383 aaPredicted RBP13.63□□□□□ -0.23
SCAF8-203ENST00000417268 KCPQ6ZWJ8 1503 aa13.63□□□□□ -0.23
SCAF8-203ENST00000417268 YDJCA8MPS7 323 aa13.63□□□□□ -0.23
SCAF8-203ENST00000417268 MSH2P43246 934 aa13.63□□□□□ -0.23
SCAF8-203ENST00000417268 CHADLQ6NUI6 762 aa13.63□□□□□ -0.23
SCAF8-203ENST00000417268 PPP4R1Q8TF05 950 aa13.63□□□□□ -0.23
SCAF8-203ENST00000417268 SH3GL3Q99963 347 aa13.63□□□□□ -0.23
SCAF8-203ENST00000417268 CYP26B1Q9NR63 512 aa13.63□□□□□ -0.23
SCAF8-203ENST00000417268 GMNNO75496 209 aa13.63□□□□□ -0.23
SCAF8-203ENST00000417268 CTSHP09668 335 aa13.63□□□□□ -0.23
SCAF8-203ENST00000417268 FBXO16Q8IX29 292 aaPredicted RBP13.63□□□□□ -0.23
SCAF8-203ENST00000417268 NME8Q8N427 588 aa13.63□□□□□ -0.23
SCAF8-203ENST00000417268 NOA1Q8NC60 698 aaKnown RBP13.63□□□□□ -0.23
SCAF8-203ENST00000417268 ZNF473Q8WTR7 871 aaKnown RBP13.63□□□□□ -0.23
SCAF8-203ENST00000417268 ACSL3O95573 720 aa13.63□□□□□ -0.23
SCAF8-203ENST00000417268 TMCO4Q5TGY1 634 aa13.63□□□□□ -0.23
SCAF8-203ENST00000417268 TATDN1Q6P1N9 297 aa13.63□□□□□ -0.23
SCAF8-203ENST00000417268 LRRC71Q8N4P6 559 aa13.63□□□□□ -0.23
SCAF8-203ENST00000417268 TC2NQ8N9U0 490 aa13.63□□□□□ -0.23
SCAF8-203ENST00000417268 PGBD4Q96DM1 585 aa13.63□□□□□ -0.23
SCAF8-203ENST00000417268 CHMP6Q96FZ7 201 aa13.63□□□□□ -0.23
SCAF8-203ENST00000417268 PITPNM3Q9BZ71 974 aa13.63□□□□□ -0.23
SCAF8-203ENST00000417268 SNX24Q9Y343 169 aa13.63□□□□□ -0.23
SCAF8-203ENST00000417268 IRF6O14896 467 aa13.62□□□□□ -0.23
SCAF8-203ENST00000417268 NKRFO15226 690 aaKnown RBP eCLIP13.62□□□□□ -0.231e-8■□□□□ 9.5
SCAF8-203ENST00000417268 MAPK13O15264 365 aa13.62□□□□□ -0.23
SCAF8-203ENST00000417268 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.62□□□□□ -0.23
SCAF8-203ENST00000417268 SGO2Q562F6 1265 aa13.62□□□□□ -0.23
SCAF8-203ENST00000417268 ZNF484Q5JVG2 852 aa13.62□□□□□ -0.23
SCAF8-203ENST00000417268 METTL7BQ6UX53 244 aa13.62□□□□□ -0.23
SCAF8-203ENST00000417268 CCNI2Q6ZMN8 369 aaPredicted RBP13.62□□□□□ -0.23
SCAF8-203ENST00000417268 UPF1Q92900 1129 aaKnown RBP eCLIP13.62□□□□□ -0.23
SCAF8-203ENST00000417268 GEMIN8Q9NWZ8 242 aaKnown RBP13.62□□□□□ -0.23
SCAF8-203ENST00000417268 ADAM22Q9P0K1 906 aa13.62□□□□□ -0.23
SCAF8-203ENST00000417268 CACNA1FO60840 1977 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms