RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 PAAF1Q9BRP4 392 aa13.51□□□□□ -0.25
LIMS2-210ENST00000413578 RPP25Q9BUL9 199 aaKnown RBP13.51□□□□□ -0.25
LIMS2-210ENST00000413578 DDX23Q9BUQ8 820 aaKnown RBP13.51□□□□□ -0.25
LIMS2-210ENST00000413578 APOL6Q9BWW8 343 aa13.51□□□□□ -0.25
LIMS2-210ENST00000413578 PIDD1Q9HB75 910 aa13.51□□□□□ -0.25
LIMS2-210ENST00000413578 SIT1Q9Y3P8 196 aa13.51□□□□□ -0.25
LIMS2-210ENST00000413578 ZFP37Q9Y6Q3 630 aaPredicted RBP13.51□□□□□ -0.25
LIMS2-210ENST00000413578 DMXL1Q9Y485 3027 aa13.5□□□□□ -0.25
LIMS2-210ENST00000413578 SF3B1O75533 1304 aaKnown RBP eCLIP13.5□□□□□ -0.25
LIMS2-210ENST00000413578 CDKL5O76039 1030 aa13.5□□□□□ -0.25
LIMS2-210ENST00000413578 NPTXRO95502 500 aa13.5□□□□□ -0.25
LIMS2-210ENST00000413578 SP9P0CG40 484 aa13.5□□□□□ -0.25
LIMS2-210ENST00000413578 NR5A1Q13285 461 aa13.5□□□□□ -0.25
LIMS2-210ENST00000413578 HSP90AA2PQ14568 343 aaPredicted RBP13.5□□□□□ -0.25
LIMS2-210ENST00000413578 CDCA2Q69YH5 1023 aaPredicted RBP13.5□□□□□ -0.25
LIMS2-210ENST00000413578 DCLRE1AQ6PJP8 1040 aa13.5□□□□□ -0.25
LIMS2-210ENST00000413578 PRSS55Q6UWB4 352 aaPredicted RBP13.5□□□□□ -0.25
LIMS2-210ENST00000413578 PARM1Q6UWI2 310 aa13.5□□□□□ -0.25
LIMS2-210ENST00000413578 GLYCTKQ8IVS8 523 aa13.5□□□□□ -0.25
LIMS2-210ENST00000413578 C1orf210Q8IVY1 113 aa13.5□□□□□ -0.25
LIMS2-210ENST00000413578 HACE1Q8IYU2 909 aa13.5□□□□□ -0.25
LIMS2-210ENST00000413578 PJA1Q8NG27 643 aa13.5□□□□□ -0.25
LIMS2-210ENST00000413578 LNX1Q8TBB1 728 aaPredicted RBP13.5□□□□□ -0.25
LIMS2-210ENST00000413578 RABGGTAQ92696 567 aa13.5□□□□□ -0.25
LIMS2-210ENST00000413578 FGF14Q92915 247 aa13.5□□□□□ -0.25
LIMS2-210ENST00000413578 TRIM6Q9C030 488 aaPredicted RBP13.5□□□□□ -0.25
LIMS2-210ENST00000413578 PDRG1Q9NUG6 133 aa13.5□□□□□ -0.25
LIMS2-210ENST00000413578 CACNG4Q9UBN1 327 aa13.5□□□□□ -0.25
LIMS2-210ENST00000413578 POTEMA6NI47 508 aa13.49□□□□□ -0.25
LIMS2-210ENST00000413578 STK25O00506 426 aa13.49□□□□□ -0.25
LIMS2-210ENST00000413578 PTGESO14684 152 aa13.49□□□□□ -0.25
LIMS2-210ENST00000413578 PFKFB2O60825 505 aa13.49□□□□□ -0.25
LIMS2-210ENST00000413578 DTNBO60941 627 aa13.49□□□□□ -0.25
LIMS2-210ENST00000413578 POU2F2P09086 479 aa13.49□□□□□ -0.25
LIMS2-210ENST00000413578 HNRNPA1P09651 372 aaKnown RBP eCLIP13.49□□□□□ -0.25
LIMS2-210ENST00000413578 FDPSP14324 419 aaKnown RBP13.49□□□□□ -0.25
LIMS2-210ENST00000413578 FSHRP23945 695 aa13.49□□□□□ -0.25
LIMS2-210ENST00000413578 HOXA9P31269 272 aa13.49□□□□□ -0.25
LIMS2-210ENST00000413578 GPC5P78333 572 aa13.49□□□□□ -0.25
LIMS2-210ENST00000413578 FAM187BQ17R55 369 aa13.49□□□□□ -0.25
LIMS2-210ENST00000413578 SPECC1Q5M775 1068 aa13.49□□□□□ -0.25
LIMS2-210ENST00000413578 ST13P5Q8NFI4 369 aaPredicted RBP13.49□□□□□ -0.25
LIMS2-210ENST00000413578 PRIMPOLQ96LW4 560 aa13.49□□□□□ -0.25
LIMS2-210ENST00000413578 TTPALQ9BTX7 342 aa13.49□□□□□ -0.25
LIMS2-210ENST00000413578 FOXQ1Q9C009 403 aa13.49□□□□□ -0.25
LIMS2-210ENST00000413578 POLR3FQ9H1D9 316 aaPredicted RBP13.49□□□□□ -0.25
LIMS2-210ENST00000413578 FZD8Q9H461 694 aa13.49□□□□□ -0.25
LIMS2-210ENST00000413578 KLK14Q9P0G3 267 aa13.49□□□□□ -0.25
LIMS2-210ENST00000413578 CDH7Q9ULB5 785 aa13.49□□□□□ -0.25
LIMS2-210ENST00000413578 TPCN1Q9ULQ1 816 aa13.49□□□□□ -0.25
LIMS2-210ENST00000413578 TTLL13PA6NNM8 815 aa13.48□□□□□ -0.25
LIMS2-210ENST00000413578 WNT7AO00755 349 aa13.48□□□□□ -0.25
LIMS2-210ENST00000413578 MARCH6O60337 910 aa13.48□□□□□ -0.25
LIMS2-210ENST00000413578 LRRN2O75325 713 aa13.48□□□□□ -0.25
LIMS2-210ENST00000413578 TADA2AO75478 443 aa13.48□□□□□ -0.25
LIMS2-210ENST00000413578 KIF4AO95239 1232 aa13.48□□□□□ -0.25
LIMS2-210ENST00000413578 BAG4O95429 457 aaKnown RBP13.48□□□□□ -0.25
LIMS2-210ENST00000413578 XBP1P17861 261 aa13.48□□□□□ -0.25
LIMS2-210ENST00000413578 NTHL1P78549 312 aa13.48□□□□□ -0.25
LIMS2-210ENST00000413578 TUSC3Q13454 348 aa13.48□□□□□ -0.25
LIMS2-210ENST00000413578 GRASPQ7Z6J2 395 aaPredicted RBP13.48□□□□□ -0.25
LIMS2-210ENST00000413578 SUMF1Q8NBK3 374 aa13.48□□□□□ -0.25
LIMS2-210ENST00000413578 KCNG4Q8TDN1 519 aa13.48□□□□□ -0.25
LIMS2-210ENST00000413578 PIGOQ8TEQ8 1089 aa13.48□□□□□ -0.25
LIMS2-210ENST00000413578 FGF13Q92913 245 aa13.48□□□□□ -0.25
LIMS2-210ENST00000413578 MTMR9Q96QG7 549 aa13.48□□□□□ -0.25
LIMS2-210ENST00000413578 CXCL16Q9H2A7 254 aa13.48□□□□□ -0.25
LIMS2-210ENST00000413578 GPRC5CQ9NQ84 441 aa13.48□□□□□ -0.25
LIMS2-210ENST00000413578 PARP2Q9UGN5 583 aa13.48□□□□□ -0.25
LIMS2-210ENST00000413578 PCDHA12Q9UN75 941 aa13.48□□□□□ -0.25
LIMS2-210ENST00000413578 ARID2Q68CP9 1835 aa13.48□□□□□ -0.25
LIMS2-210ENST00000413578 MED19A0JLT2 244 aaPredicted RBP13.47□□□□□ -0.25
LIMS2-210ENST00000413578 CASTOR2A6NHX0 329 aa13.47□□□□□ -0.25
LIMS2-210ENST00000413578 ADAM12O43184 909 aa13.47□□□□□ -0.25
LIMS2-210ENST00000413578 C8AP07357 584 aa13.47□□□□□ -0.25
LIMS2-210ENST00000413578 SPATA31C1P0DKV0 1188 aa13.47□□□□□ -0.25
LIMS2-210ENST00000413578 XRCC6P12956 609 aaKnown RBP eCLIP13.47□□□□□ -0.25
LIMS2-210ENST00000413578 RFX1P22670 979 aa13.47□□□□□ -0.25
LIMS2-210ENST00000413578 CALCRLQ16602 461 aa13.47□□□□□ -0.25
LIMS2-210ENST00000413578 ZC3H14Q6PJT7 736 aaKnown RBP13.47□□□□□ -0.25
LIMS2-210ENST00000413578 HASPINQ8TF76 798 aa13.47□□□□□ -0.25
LIMS2-210ENST00000413578 PDZD7Q9H5P4 517 aa13.47□□□□□ -0.25
LIMS2-210ENST00000413578 TTC12Q9H892 705 aaPredicted RBP13.47□□□□□ -0.25
LIMS2-210ENST00000413578 PRMT7Q9NVM4 692 aaPredicted RBP13.47□□□□□ -0.25
LIMS2-210ENST00000413578 CACNA1IQ9P0X4 2223 aa13.46□□□□□ -0.25
LIMS2-210ENST00000413578 A0A087WWV3 80 aa13.46□□□□□ -0.25
LIMS2-210ENST00000413578 KANSL1LA0AUZ9 987 aa13.46□□□□□ -0.25
LIMS2-210ENST00000413578 USO1O60763 962 aaKnown RBP13.46□□□□□ -0.25
LIMS2-210ENST00000413578 EDN1P05305 212 aa13.46□□□□□ -0.25
LIMS2-210ENST00000413578 KRT2P35908 639 aa13.46□□□□□ -0.25
LIMS2-210ENST00000413578 PRKCQQ04759 706 aa13.46□□□□□ -0.25
LIMS2-210ENST00000413578 RAB33AQ14088 237 aa13.46□□□□□ -0.25
LIMS2-210ENST00000413578 PSMD5Q16401 504 aa13.46□□□□□ -0.25
LIMS2-210ENST00000413578 ZNF528Q3MIS6 628 aa13.46□□□□□ -0.25
LIMS2-210ENST00000413578 LIN9Q5TKA1 542 aa13.46□□□□□ -0.25
LIMS2-210ENST00000413578 FAM171A1Q5VUB5 890 aa13.46□□□□□ -0.25
LIMS2-210ENST00000413578 KIAA2013Q8IYS2 634 aa13.46□□□□□ -0.25
LIMS2-210ENST00000413578 ITFG1Q8TB96 612 aa13.46□□□□□ -0.25
LIMS2-210ENST00000413578 BSNDQ8WZ55 320 aa13.46□□□□□ -0.25
LIMS2-210ENST00000413578 RUBCNQ92622 972 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms