RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 DCNP07585 359 aaKnown RBP15.8■□□□□ 0.12
HLA-DQB2-229ENST00000411527 KRT2P35908 639 aa15.8■□□□□ 0.12
HLA-DQB2-229ENST00000411527 HTR4Q13639 388 aa15.8■□□□□ 0.12
HLA-DQB2-229ENST00000411527 CALCRLQ16602 461 aa15.8■□□□□ 0.12
HLA-DQB2-229ENST00000411527 PHLDB3Q6NSJ2 640 aa15.8■□□□□ 0.12
HLA-DQB2-229ENST00000411527 PAAF1Q9BRP4 392 aa15.8■□□□□ 0.12
HLA-DQB2-229ENST00000411527 POLR3FQ9H1D9 316 aaPredicted RBP15.8■□□□□ 0.12
HLA-DQB2-229ENST00000411527 SEMA4AQ9H3S1 761 aa15.8■□□□□ 0.12
HLA-DQB2-229ENST00000411527 TTC12Q9H892 705 aaPredicted RBP15.8■□□□□ 0.12
HLA-DQB2-229ENST00000411527 ARHGEF3Q9NR81 526 aa15.8■□□□□ 0.12
HLA-DQB2-229ENST00000411527 TPCN1Q9ULQ1 816 aa15.8■□□□□ 0.12
HLA-DQB2-229ENST00000411527 SIT1Q9Y3P8 196 aa15.8■□□□□ 0.12
HLA-DQB2-229ENST00000411527 NUMBLQ9Y6R0 609 aa15.8■□□□□ 0.12
HLA-DQB2-229ENST00000411527 R4GN57 208 aa15.8■□□□□ 0.12
HLA-DQB2-229ENST00000411527 LRRIQ4A6NIV6 560 aa15.79■□□□□ 0.12
HLA-DQB2-229ENST00000411527 CTDNEP1O95476 244 aa15.79■□□□□ 0.12
HLA-DQB2-229ENST00000411527 LMNAP02545 664 aaKnown RBP15.79■□□□□ 0.12
HLA-DQB2-229ENST00000411527 FSHRP23945 695 aa15.79■□□□□ 0.12
HLA-DQB2-229ENST00000411527 TXKP42681 527 aa15.79■□□□□ 0.12
HLA-DQB2-229ENST00000411527 RARRES1P49788 294 aa15.79■□□□□ 0.12
HLA-DQB2-229ENST00000411527 HSP90AA2PQ14568 343 aaPredicted RBP15.79■□□□□ 0.12
HLA-DQB2-229ENST00000411527 RTP2Q5QGT7 225 aa15.79■□□□□ 0.12
HLA-DQB2-229ENST00000411527 DCLRE1AQ6PJP8 1040 aa15.79■□□□□ 0.12
HLA-DQB2-229ENST00000411527 MAEAQ7L5Y9 396 aa15.79■□□□□ 0.12
HLA-DQB2-229ENST00000411527 HASPINQ8TF76 798 aa15.79■□□□□ 0.12
HLA-DQB2-229ENST00000411527 WASF1Q92558 559 aa15.79■□□□□ 0.12
HLA-DQB2-229ENST00000411527 BRMS1Q9HCU9 246 aa15.79■□□□□ 0.12
HLA-DQB2-229ENST00000411527 ZMYM2Q9UBW7 1377 aa15.78■□□□□ 0.12
HLA-DQB2-229ENST00000411527 SF3B1O75533 1304 aaKnown RBP eCLIP15.78■□□□□ 0.12
HLA-DQB2-229ENST00000411527 USO1O60763 962 aaKnown RBP15.78■□□□□ 0.12
HLA-DQB2-229ENST00000411527 TUSC3Q13454 348 aa15.78■□□□□ 0.12
HLA-DQB2-229ENST00000411527 FAM171A1Q5VUB5 890 aa15.78■□□□□ 0.12
HLA-DQB2-229ENST00000411527 GRASPQ7Z6J2 395 aaPredicted RBP15.78■□□□□ 0.12
HLA-DQB2-229ENST00000411527 CEP57Q86XR8 500 aa15.78■□□□□ 0.12
HLA-DQB2-229ENST00000411527 TNFRSF25Q93038 417 aa15.78■□□□□ 0.12
HLA-DQB2-229ENST00000411527 CLSTN3Q9BQT9 956 aa15.78■□□□□ 0.12
HLA-DQB2-229ENST00000411527 TTPALQ9BTX7 342 aa15.78■□□□□ 0.12
HLA-DQB2-229ENST00000411527 RPP25Q9BUL9 199 aaKnown RBP15.78■□□□□ 0.12
HLA-DQB2-229ENST00000411527 GPRC5CQ9NQ84 441 aa15.78■□□□□ 0.12
HLA-DQB2-229ENST00000411527 SLC2A4RGQ9NR83 387 aa15.78■□□□□ 0.12
HLA-DQB2-229ENST00000411527 DLGAP2Q9P1A6 1054 aa15.78■□□□□ 0.12
HLA-DQB2-229ENST00000411527 ZFP37Q9Y6Q3 630 aaPredicted RBP15.78■□□□□ 0.12
HLA-DQB2-229ENST00000411527 MYH15Q9Y2K3 1946 aa15.78■□□□□ 0.12
HLA-DQB2-229ENST00000411527 CASTOR2A6NHX0 329 aa15.77■□□□□ 0.12
HLA-DQB2-229ENST00000411527 XRCC6P12956 609 aaKnown RBP eCLIP15.77■□□□□ 0.12
HLA-DQB2-229ENST00000411527 FDPSP14324 419 aaKnown RBP15.77■□□□□ 0.12
HLA-DQB2-229ENST00000411527 GPC5P78333 572 aa15.77■□□□□ 0.12
HLA-DQB2-229ENST00000411527 NTHL1P78549 312 aa15.77■□□□□ 0.12
HLA-DQB2-229ENST00000411527 PSMD5Q16401 504 aa15.77■□□□□ 0.12
HLA-DQB2-229ENST00000411527 PPM1LQ5SGD2 360 aa15.77■□□□□ 0.12
HLA-DQB2-229ENST00000411527 PARM1Q6UWI2 310 aa15.77■□□□□ 0.12
HLA-DQB2-229ENST00000411527 C1orf210Q8IVY1 113 aa15.77■□□□□ 0.12
HLA-DQB2-229ENST00000411527 LNX1Q8TBB1 728 aaPredicted RBP15.77■□□□□ 0.12
HLA-DQB2-229ENST00000411527 FGF14Q92915 247 aa15.77■□□□□ 0.12
HLA-DQB2-229ENST00000411527 PRIMPOLQ96LW4 560 aa15.77■□□□□ 0.12
HLA-DQB2-229ENST00000411527 PRMT7Q9NVM4 692 aaPredicted RBP15.77■□□□□ 0.12
HLA-DQB2-229ENST00000411527 FBXW11Q9UKB1 542 aa15.77■□□□□ 0.12
HLA-DQB2-229ENST00000411527 CDH7Q9ULB5 785 aa15.77■□□□□ 0.12
HLA-DQB2-229ENST00000411527 POLIQ9UNA4 740 aa15.77■□□□□ 0.12
HLA-DQB2-229ENST00000411527 NEMFO60524 1076 aa15.76■□□□□ 0.11
HLA-DQB2-229ENST00000411527 KIF4AO95239 1232 aa15.76■□□□□ 0.11
HLA-DQB2-229ENST00000411527 THP07101 528 aa15.76■□□□□ 0.11
HLA-DQB2-229ENST00000411527 HNRNPA1P09651 372 aaKnown RBP eCLIP15.76■□□□□ 0.11
HLA-DQB2-229ENST00000411527 SP9P0CG40 484 aa15.76■□□□□ 0.11
HLA-DQB2-229ENST00000411527 TMEM132AQ24JP5 1023 aa15.76■□□□□ 0.11
HLA-DQB2-229ENST00000411527 LIN9Q5TKA1 542 aa15.76■□□□□ 0.11
HLA-DQB2-229ENST00000411527 PPP4R3CPQ6ZMV5 832 aa15.76■□□□□ 0.11
HLA-DQB2-229ENST00000411527 ZBTB8OSQ8IWT0 167 aa15.76■□□□□ 0.11
HLA-DQB2-229ENST00000411527 KIAA2013Q8IYS2 634 aa15.76■□□□□ 0.11
HLA-DQB2-229ENST00000411527 PIK3R5Q8WYR1 880 aa15.76■□□□□ 0.11
HLA-DQB2-229ENST00000411527 SHDQ96IW2 340 aa15.76■□□□□ 0.11
HLA-DQB2-229ENST00000411527 FOXQ1Q9C009 403 aa15.76■□□□□ 0.11
HLA-DQB2-229ENST00000411527 FZD8Q9H461 694 aa15.76■□□□□ 0.11
HLA-DQB2-229ENST00000411527 SNTG2Q9NY99 539 aa15.76■□□□□ 0.11
HLA-DQB2-229ENST00000411527 GVINP1Q7Z2Y8 2422 aa15.76■□□□□ 0.11
HLA-DQB2-229ENST00000411527 MIA3Q5JRA6 1907 aa15.76■□□□□ 0.11
HLA-DQB2-229ENST00000411527 FANCMQ8IYD8 2048 aa15.75■□□□□ 0.11
HLA-DQB2-229ENST00000411527 POTEMA6NI47 508 aa15.75■□□□□ 0.11
HLA-DQB2-229ENST00000411527 TTLL13PA6NNM8 815 aa15.75■□□□□ 0.11
HLA-DQB2-229ENST00000411527 BTBD18B2RXH4 712 aa15.75■□□□□ 0.11
HLA-DQB2-229ENST00000411527 WNT7AO00755 349 aa15.75■□□□□ 0.11
HLA-DQB2-229ENST00000411527 PTGESO14684 152 aa15.75■□□□□ 0.11
HLA-DQB2-229ENST00000411527 N4BP3O15049 544 aa15.75■□□□□ 0.11
HLA-DQB2-229ENST00000411527 CCL16O15467 120 aa15.75■□□□□ 0.11
HLA-DQB2-229ENST00000411527 LRRN2O75325 713 aa15.75■□□□□ 0.11
HLA-DQB2-229ENST00000411527 C8AP07357 584 aa15.75■□□□□ 0.11
HLA-DQB2-229ENST00000411527 SPATA31C1P0DKV0 1188 aa15.75■□□□□ 0.11
HLA-DQB2-229ENST00000411527 GLULP15104 373 aa15.75■□□□□ 0.11
HLA-DQB2-229ENST00000411527 ATP2B1P20020 1258 aa15.75■□□□□ 0.11
HLA-DQB2-229ENST00000411527 STARD6P59095 220 aa15.75■□□□□ 0.11
HLA-DQB2-229ENST00000411527 FAM187BQ17R55 369 aa15.75■□□□□ 0.11
HLA-DQB2-229ENST00000411527 ZC3H14Q6PJT7 736 aaKnown RBP15.75■□□□□ 0.11
HLA-DQB2-229ENST00000411527 NECAB1Q8N987 351 aa15.75■□□□□ 0.11
HLA-DQB2-229ENST00000411527 MCPH1Q8NEM0 835 aa15.75■□□□□ 0.11
HLA-DQB2-229ENST00000411527 PJA1Q8NG27 643 aa15.75■□□□□ 0.11
HLA-DQB2-229ENST00000411527 FGF13Q92913 245 aa15.75■□□□□ 0.11
HLA-DQB2-229ENST00000411527 MTMR9Q96QG7 549 aa15.75■□□□□ 0.11
HLA-DQB2-229ENST00000411527 CXCL16Q9H2A7 254 aa15.75■□□□□ 0.11
HLA-DQB2-229ENST00000411527 PDZD7Q9H5P4 517 aa15.75■□□□□ 0.11
HLA-DQB2-229ENST00000411527 CACNA1IQ9P0X4 2223 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms