RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 GAD1Q99259 594 aa14.08□□□□□ -0.16
CHRNA1-205ENST00000409542 RPP25Q9BUL9 199 aaKnown RBP14.08□□□□□ -0.16
CHRNA1-205ENST00000409542 KANSL3Q9P2N6 904 aa14.08□□□□□ -0.16
CHRNA1-205ENST00000409542 PCDHA4Q9UN74 947 aa14.08□□□□□ -0.16
CHRNA1-205ENST00000409542 HES2Q9Y543 173 aa14.08□□□□□ -0.16
CHRNA1-205ENST00000409542 MTCL1Q9Y4B5 1905 aaKnown RBP14.08□□□□□ -0.16
CHRNA1-205ENST00000409542 FANCMQ8IYD8 2048 aa14.07□□□□□ -0.16
CHRNA1-205ENST00000409542 CNTNAP2Q9UHC6 1331 aa14.07□□□□□ -0.16
CHRNA1-205ENST00000409542 ZBTB39O15060 712 aa14.07□□□□□ -0.16
CHRNA1-205ENST00000409542 ADCY5O95622 1261 aa14.07□□□□□ -0.16
CHRNA1-205ENST00000409542 CAVIN2O95810 425 aa14.07□□□□□ -0.16
CHRNA1-205ENST00000409542 PTMAP06454 111 aaKnown RBP14.07□□□□□ -0.16
CHRNA1-205ENST00000409542 ADH1AP07327 375 aa14.07□□□□□ -0.16
CHRNA1-205ENST00000409542 SP9P0CG40 484 aa14.07□□□□□ -0.16
CHRNA1-205ENST00000409542 GLUD2P49448 558 aa14.07□□□□□ -0.16
CHRNA1-205ENST00000409542 DSG1Q02413 1049 aa14.07□□□□□ -0.16
CHRNA1-205ENST00000409542 LAMTOR4Q0VGL1 99 aa14.07□□□□□ -0.16
CHRNA1-205ENST00000409542 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.07□□□□□ -0.16
CHRNA1-205ENST00000409542 SRGAP1Q7Z6B7 1085 aa14.07□□□□□ -0.16
CHRNA1-205ENST00000409542 RABGGTAQ92696 567 aa14.07□□□□□ -0.16
CHRNA1-205ENST00000409542 CPB2Q96IY4 423 aa14.07□□□□□ -0.16
CHRNA1-205ENST00000409542 AIFM3Q96NN9 605 aa14.07□□□□□ -0.16
CHRNA1-205ENST00000409542 RHOBTB2Q9BYZ6 727 aa14.07□□□□□ -0.16
CHRNA1-205ENST00000409542 GPR62Q9BZJ7 368 aa14.07□□□□□ -0.16
CHRNA1-205ENST00000409542 NT5C3AQ9H0P0 336 aa14.07□□□□□ -0.16
CHRNA1-205ENST00000409542 DHX33Q9H6R0 707 aaKnown RBP14.07□□□□□ -0.16
CHRNA1-205ENST00000409542 SH3GLB2Q9NR46 395 aa14.07□□□□□ -0.16
CHRNA1-205ENST00000409542 VAV3Q9UKW4 847 aa14.07□□□□□ -0.16
CHRNA1-205ENST00000409542 IPPQ9Y573 584 aa14.07□□□□□ -0.16
CHRNA1-205ENST00000409542 CACNA1IQ9P0X4 2223 aa14.07□□□□□ -0.16
CHRNA1-205ENST00000409542 ARL5CA6NH57 179 aa14.06□□□□□ -0.16
CHRNA1-205ENST00000409542 TGM5O43548 720 aa14.06□□□□□ -0.16
CHRNA1-205ENST00000409542 PAPLNO95428 1278 aa14.06□□□□□ -0.16
CHRNA1-205ENST00000409542 LAMP2P13473 410 aa14.06□□□□□ -0.16
CHRNA1-205ENST00000409542 ITGA4P13612 1032 aa14.06□□□□□ -0.16
CHRNA1-205ENST00000409542 RPL17P18621 184 aaKnown RBP14.06□□□□□ -0.16
CHRNA1-205ENST00000409542 MLH1P40692 756 aa14.06□□□□□ -0.16
CHRNA1-205ENST00000409542 SCNN1GP51170 649 aa14.06□□□□□ -0.16
CHRNA1-205ENST00000409542 DSC1Q08554 894 aa14.06□□□□□ -0.16
CHRNA1-205ENST00000409542 GET4Q7L5D6 327 aaPredicted RBP14.06□□□□□ -0.16
CHRNA1-205ENST00000409542 BRAPQ7Z569 592 aa14.06□□□□□ -0.16
CHRNA1-205ENST00000409542 MAML2Q8IZL2 1156 aaPredicted RBP14.06□□□□□ -0.16
CHRNA1-205ENST00000409542 CEP170P1Q96L14 293 aa14.06□□□□□ -0.16
CHRNA1-205ENST00000409542 ZFP42Q96MM3 310 aa14.06□□□□□ -0.16
CHRNA1-205ENST00000409542 FOXQ1Q9C009 403 aa14.06□□□□□ -0.16
CHRNA1-205ENST00000409542 CHST7Q9NS84 486 aa14.06□□□□□ -0.16
CHRNA1-205ENST00000409542 STK39Q9UEW8 545 aa14.06□□□□□ -0.16
CHRNA1-205ENST00000409542 OTOGLQ3ZCN5 2332 aa14.06□□□□□ -0.16
CHRNA1-205ENST00000409542 TDRD15B5MCY1 1934 aaKnown RBP14.06□□□□□ -0.16
CHRNA1-205ENST00000409542 ANHXE9PGG2 379 aa14.06□□□□□ -0.16
CHRNA1-205ENST00000409542 CPLX1O14810 134 aa14.06□□□□□ -0.16
CHRNA1-205ENST00000409542 GAS2O43903 313 aaKnown RBP14.06□□□□□ -0.16
CHRNA1-205ENST00000409542 NR1I2O75469 434 aa14.06□□□□□ -0.16
CHRNA1-205ENST00000409542 CDKL5O76039 1030 aa14.06□□□□□ -0.16
CHRNA1-205ENST00000409542 QARSP47897 775 aaKnown RBP14.06□□□□□ -0.16
CHRNA1-205ENST00000409542 HTR4Q13639 388 aa14.06□□□□□ -0.16
CHRNA1-205ENST00000409542 INF2Q27J81 1249 aa14.06□□□□□ -0.16
CHRNA1-205ENST00000409542 PHLDB3Q6NSJ2 640 aa14.06□□□□□ -0.16
CHRNA1-205ENST00000409542 LILRA6Q6PI73 481 aa14.06□□□□□ -0.16
CHRNA1-205ENST00000409542 CYP26C1Q6V0L0 522 aa14.06□□□□□ -0.16
CHRNA1-205ENST00000409542 DGLUCYQ7Z3D6 616 aa14.06□□□□□ -0.16
CHRNA1-205ENST00000409542 BLIDQ8IZY5 108 aa14.06□□□□□ -0.16
CHRNA1-205ENST00000409542 RNF149Q8NC42 400 aa14.06□□□□□ -0.16
CHRNA1-205ENST00000409542 GSTCDQ8NEC7 633 aa14.06□□□□□ -0.16
CHRNA1-205ENST00000409542 FBXO18Q8NFZ0 1043 aa14.06□□□□□ -0.16
CHRNA1-205ENST00000409542 PSPC1Q8WXF1 523 aaKnown RBP14.06□□□□□ -0.16
CHRNA1-205ENST00000409542 STAMQ92783 540 aa14.06□□□□□ -0.16
CHRNA1-205ENST00000409542 C8orf76Q96K31 380 aa14.06□□□□□ -0.16
CHRNA1-205ENST00000409542 USP28Q96RU2 1077 aa14.06□□□□□ -0.16
CHRNA1-205ENST00000409542 JPH2Q9BR39 696 aaPredicted RBP14.06□□□□□ -0.16
CHRNA1-205ENST00000409542 SEMA4AQ9H3S1 761 aa14.06□□□□□ -0.16
CHRNA1-205ENST00000409542 ORC3Q9UBD5 711 aaPredicted RBP14.06□□□□□ -0.16
CHRNA1-205ENST00000409542 CACNG4Q9UBN1 327 aa14.06□□□□□ -0.16
CHRNA1-205ENST00000409542 DDX25Q9UHL0 483 aaKnown RBP14.06□□□□□ -0.16
CHRNA1-205ENST00000409542 SIT1Q9Y3P8 196 aa14.06□□□□□ -0.16
CHRNA1-205ENST00000409542 NUMBLQ9Y6R0 609 aa14.06□□□□□ -0.16
CHRNA1-205ENST00000409542 TSPAN1O60635 241 aa14.05□□□□□ -0.16
CHRNA1-205ENST00000409542 TPM3P06753 285 aa14.05□□□□□ -0.16
CHRNA1-205ENST00000409542 RFX1P22670 979 aa14.05□□□□□ -0.16
CHRNA1-205ENST00000409542 FOSBP53539 338 aa14.05□□□□□ -0.16
CHRNA1-205ENST00000409542 NTHL1P78549 312 aa14.05□□□□□ -0.16
CHRNA1-205ENST00000409542 NONOQ15233 471 aaKnown RBP eCLIP14.05□□□□□ -0.16
CHRNA1-205ENST00000409542 DCLRE1AQ6PJP8 1040 aa14.05□□□□□ -0.16
CHRNA1-205ENST00000409542 C1orf210Q8IVY1 113 aa14.05□□□□□ -0.16
CHRNA1-205ENST00000409542 SLC7A3Q8WY07 619 aa14.05□□□□□ -0.16
CHRNA1-205ENST00000409542 FGF14Q92915 247 aa14.05□□□□□ -0.16
CHRNA1-205ENST00000409542 NXPE3Q969Y0 559 aa14.05□□□□□ -0.16
CHRNA1-205ENST00000409542 NAP1L5Q96NT1 182 aaPredicted RBP14.05□□□□□ -0.16
CHRNA1-205ENST00000409542 APOL6Q9BWW8 343 aa14.05□□□□□ -0.16
CHRNA1-205ENST00000409542 PIDD1Q9HB75 910 aa14.05□□□□□ -0.16
CHRNA1-205ENST00000409542 ARHGEF3Q9NR81 526 aa14.05□□□□□ -0.16
CHRNA1-205ENST00000409542 RGL1Q9NZL6 768 aa14.05□□□□□ -0.16
CHRNA1-205ENST00000409542 SSX2IPQ9Y2D8 614 aa14.05□□□□□ -0.16
CHRNA1-205ENST00000409542 A0A1W2PQ27 194 aa14.04□□□□□ -0.16
CHRNA1-205ENST00000409542 A0A1W2PQ64 194 aa14.04□□□□□ -0.16
CHRNA1-205ENST00000409542 A0A1W2PQD8 194 aa14.04□□□□□ -0.16
CHRNA1-205ENST00000409542 YEATS4O95619 227 aa14.04□□□□□ -0.16
CHRNA1-205ENST00000409542 P4HBP07237 508 aaKnown RBP14.04□□□□□ -0.16
CHRNA1-205ENST00000409542 TERF1P54274 439 aa14.04□□□□□ -0.16
CHRNA1-205ENST00000409542 GPC5P78333 572 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms