RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 FAM110CQ1W6H9 321 aa6.78□□□□□ -1.32
GTF3C3-202ENST00000409364 PKDCCQ504Y2 493 aa6.78□□□□□ -1.32
GTF3C3-202ENST00000409364 WDR44Q5JSH3 913 aa6.78□□□□□ -1.32
GTF3C3-202ENST00000409364 ZNF484Q5JVG2 852 aa6.78□□□□□ -1.32
GTF3C3-202ENST00000409364 TAPT1Q6NXT6 567 aa6.78□□□□□ -1.32
GTF3C3-202ENST00000409364 SV2AQ7L0J3 742 aa6.78□□□□□ -1.32
GTF3C3-202ENST00000409364 ENOSF1Q7L5Y1 443 aa6.78□□□□□ -1.32
GTF3C3-202ENST00000409364 PLEKHH3Q7Z736 793 aa6.78□□□□□ -1.32
GTF3C3-202ENST00000409364 ZBTB8OSQ8IWT0 167 aa6.78□□□□□ -1.32
GTF3C3-202ENST00000409364 FBXO16Q8IX29 292 aaPredicted RBP6.78□□□□□ -1.32
GTF3C3-202ENST00000409364 MSL3Q8N5Y2 521 aaKnown RBP6.78□□□□□ -1.32
GTF3C3-202ENST00000409364 LRRN4CLQ8ND94 238 aa6.78□□□□□ -1.32
GTF3C3-202ENST00000409364 ZSWIM2Q8NEG5 633 aa6.78□□□□□ -1.32
GTF3C3-202ENST00000409364 SLC30A5Q8TAD4 765 aa6.78□□□□□ -1.32
GTF3C3-202ENST00000409364 PLEKHO2Q8TD55 490 aa6.78□□□□□ -1.32
GTF3C3-202ENST00000409364 EMID1Q96A84 441 aaPredicted RBP6.78□□□□□ -1.32
GTF3C3-202ENST00000409364 NT5C1BQ96P26 610 aa6.78□□□□□ -1.32
GTF3C3-202ENST00000409364 FAM213AQ9BRX8 229 aa6.78□□□□□ -1.32
GTF3C3-202ENST00000409364 MRPL4Q9BYD3 311 aaKnown RBP6.78□□□□□ -1.32
GTF3C3-202ENST00000409364 SUGCTQ9HAC7 445 aa6.78□□□□□ -1.32
GTF3C3-202ENST00000409364 PDGFCQ9NRA1 345 aa6.78□□□□□ -1.32
GTF3C3-202ENST00000409364 ERAP1Q9NZ08 941 aa6.78□□□□□ -1.32
GTF3C3-202ENST00000409364 PUF60Q9UHX1 559 aaKnown RBP6.78□□□□□ -1.32
GTF3C3-202ENST00000409364 AJAP1Q9UKB5 411 aaPredicted RBP6.78□□□□□ -1.32
GTF3C3-202ENST00000409364 SNX12Q9UMY4 172 aa6.78□□□□□ -1.32
GTF3C3-202ENST00000409364 LOXHD1Q8IVV2 1947 aa6.77□□□□□ -1.33
GTF3C3-202ENST00000409364 SLC15A5A6NIM6 579 aa6.77□□□□□ -1.33
GTF3C3-202ENST00000409364 MAGEB2O15479 319 aa6.77□□□□□ -1.33
GTF3C3-202ENST00000409364 TOM1L1O75674 476 aa6.77□□□□□ -1.33
GTF3C3-202ENST00000409364 DLATP10515 647 aaKnown RBP6.77□□□□□ -1.33
GTF3C3-202ENST00000409364 H2AFXP16104 143 aaPredicted RBP6.77□□□□□ -1.33
GTF3C3-202ENST00000409364 MARK3P27448 753 aa6.77□□□□□ -1.33
GTF3C3-202ENST00000409364 PAFAH1B1P43034 410 aa6.77□□□□□ -1.33
GTF3C3-202ENST00000409364 ITIH3Q06033 890 aa6.77□□□□□ -1.33
GTF3C3-202ENST00000409364 LAMTOR4Q0VGL1 99 aa6.77□□□□□ -1.33
GTF3C3-202ENST00000409364 PRPF4BQ13523 1007 aaKnown RBP6.77□□□□□ -1.33
GTF3C3-202ENST00000409364 IRF5Q13568 498 aa6.77□□□□□ -1.33
GTF3C3-202ENST00000409364 CAPSQ13938 189 aa6.77□□□□□ -1.33
GTF3C3-202ENST00000409364 SURF1Q15526 300 aa6.77□□□□□ -1.33
GTF3C3-202ENST00000409364 MAPK6Q16659 721 aa6.77□□□□□ -1.33
GTF3C3-202ENST00000409364 TEX35Q5T0J7 233 aa6.77□□□□□ -1.33
GTF3C3-202ENST00000409364 IQSEC1Q6DN90 963 aa6.77□□□□□ -1.33
GTF3C3-202ENST00000409364 SMYD5Q6GMV2 418 aa6.77□□□□□ -1.33
GTF3C3-202ENST00000409364 GPR142Q7Z601 462 aa6.77□□□□□ -1.33
GTF3C3-202ENST00000409364 GPIHBP1Q8IV16 184 aa6.77□□□□□ -1.33
GTF3C3-202ENST00000409364 FAM71AQ8IYT1 594 aa6.77□□□□□ -1.33
GTF3C3-202ENST00000409364 PPTC7Q8NI37 304 aa6.77□□□□□ -1.33
GTF3C3-202ENST00000409364 U2AF1L4Q8WU68 220 aaKnown RBP6.77□□□□□ -1.33
GTF3C3-202ENST00000409364 POP1Q99575 1024 aaKnown RBP6.77□□□□□ -1.33
GTF3C3-202ENST00000409364 AGPAT1Q99943 283 aa6.77□□□□□ -1.33
GTF3C3-202ENST00000409364 SYT11Q9BT88 431 aa6.77□□□□□ -1.33
GTF3C3-202ENST00000409364 TCHPQ9BT92 498 aa6.77□□□□□ -1.33
GTF3C3-202ENST00000409364 MSTO1Q9BUK6 570 aa6.77□□□□□ -1.33
GTF3C3-202ENST00000409364 TARS2Q9BW92 718 aaKnown RBP6.77□□□□□ -1.33
GTF3C3-202ENST00000409364 GPR88Q9GZN0 384 aa6.77□□□□□ -1.33
GTF3C3-202ENST00000409364 ABHD16BQ9H3Z7 469 aa6.77□□□□□ -1.33
GTF3C3-202ENST00000409364 ZCCHC17Q9NP64 241 aaKnown RBP6.77□□□□□ -1.33
GTF3C3-202ENST00000409364 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.77□□□□□ -1.33
GTF3C3-202ENST00000409364 SUCLA2Q9P2R7 463 aaPredicted RBP6.77□□□□□ -1.33
GTF3C3-202ENST00000409364 HDAC6Q9UBN7 1215 aa6.77□□□□□ -1.33
GTF3C3-202ENST00000409364 SALL4Q9UJQ4 1053 aa6.77□□□□□ -1.33
GTF3C3-202ENST00000409364 NENFQ9UMX5 172 aa6.77□□□□□ -1.33
GTF3C3-202ENST00000409364 HYOU1Q9Y4L1 999 aa6.77□□□□□ -1.33
GTF3C3-202ENST00000409364 PCDHGC5Q9Y5F6 944 aa6.77□□□□□ -1.33
GTF3C3-202ENST00000409364 CAPN6Q9Y6Q1 641 aa6.77□□□□□ -1.33
GTF3C3-202ENST00000409364 COL11A1P12107 1806 aaPredicted RBP6.77□□□□□ -1.33
GTF3C3-202ENST00000409364 SCN4AP35499 1836 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 ANKRD62A6NC57 917 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 ZBTB42B2RXF5 422 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 ATP8B1O43520 1251 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 BUB1O43683 1085 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 MSCO60682 206 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 PALMO75781 387 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 SNAI1O95863 264 aaPredicted RBP6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 TMEM253P0C7T8 217 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 SRGAP2CP0DJJ0 459 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 GZMAP12544 262 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 TNNI1P19237 187 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 MCM3P25205 808 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 MATR3P43243 847 aaKnown RBP eCLIP6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 NOP2P46087 812 aaKnown RBP6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 GALCP54803 685 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 INHBEP58166 350 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 BPIFB4P59827 614 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 GCNT1Q02742 428 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 ARHGAP1Q07960 439 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 GRM1Q13255 1194 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 GRB14Q14449 540 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 BRD3Q15059 726 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 CDCA2Q69YH5 1023 aaPredicted RBP6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 CCDC70Q6NSX1 233 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 EFCAB12Q6NXP0 572 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 FBXO38Q6PIJ6 1188 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 TMCO3Q6UWJ1 677 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 C15orf39Q6ZRI6 1047 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 CREG2Q8IUH2 290 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 GLYCTKQ8IVS8 523 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 ARHGEF19Q8IW93 802 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 SYCE1Q8N0S2 351 aa6.76□□□□□ -1.33
GTF3C3-202ENST00000409364 PPM1KQ8N3J5 372 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms