RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.14□□□□□ -0.15
SNORD88B-201ENST00000408454 PCDHGC5Q9Y5F6 944 aa14.14□□□□□ -0.15
SNORD88B-201ENST00000408454 XYLBO75191 536 aa14.13□□□□□ -0.15
SNORD88B-201ENST00000408454 CNPP09543 421 aaKnown RBP14.13□□□□□ -0.15
SNORD88B-201ENST00000408454 HNRNPA1P09651 372 aaKnown RBP eCLIP14.13□□□□□ -0.15
SNORD88B-201ENST00000408454 RFX1P22670 979 aa14.13□□□□□ -0.15
SNORD88B-201ENST00000408454 UBA7P41226 1012 aa14.13□□□□□ -0.15
SNORD88B-201ENST00000408454 C8orf34Q49A92 452 aa14.13□□□□□ -0.15
SNORD88B-201ENST00000408454 SLC22A17Q8WUG5 538 aa14.13□□□□□ -0.15
SNORD88B-201ENST00000408454 TTPALQ9BTX7 342 aa14.13□□□□□ -0.15
SNORD88B-201ENST00000408454 OXCT2Q9BYC2 517 aaPredicted RBP14.13□□□□□ -0.15
SNORD88B-201ENST00000408454 MAN1C1Q9NR34 630 aa14.13□□□□□ -0.15
SNORD88B-201ENST00000408454 TNFSF13BQ9Y275 285 aa14.13□□□□□ -0.15
SNORD88B-201ENST00000408454 TMEM189-UBE2V1I3L0A0 370 aa14.12□□□□□ -0.15
SNORD88B-201ENST00000408454 C2CD2LO14523 706 aa14.12□□□□□ -0.15
SNORD88B-201ENST00000408454 SEC24BO95487 1268 aa14.12□□□□□ -0.15
SNORD88B-201ENST00000408454 SSBP05455 408 aaKnown RBP eCLIP14.12□□□□□ -0.15
SNORD88B-201ENST00000408454 MCF2P10911 925 aa14.12□□□□□ -0.15
SNORD88B-201ENST00000408454 LIG1P18858 919 aa14.12□□□□□ -0.15
SNORD88B-201ENST00000408454 GUCY2CP25092 1073 aa14.12□□□□□ -0.15
SNORD88B-201ENST00000408454 HOXA9P31269 272 aa14.12□□□□□ -0.15
SNORD88B-201ENST00000408454 ATP2C1P98194 919 aaPredicted RBP14.12□□□□□ -0.15
SNORD88B-201ENST00000408454 ZNF568Q3ZCX4 644 aa14.12□□□□□ -0.15
SNORD88B-201ENST00000408454 LARP1BQ659C4 914 aaKnown RBP14.12□□□□□ -0.15
SNORD88B-201ENST00000408454 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.12□□□□□ -0.15
SNORD88B-201ENST00000408454 ANKS3Q6ZW76 656 aa14.12□□□□□ -0.15
SNORD88B-201ENST00000408454 SPIRE2Q8WWL2 714 aa14.12□□□□□ -0.15
SNORD88B-201ENST00000408454 TMX3Q96JJ7 454 aa14.12□□□□□ -0.15
SNORD88B-201ENST00000408454 ZFP42Q96MM3 310 aa14.12□□□□□ -0.15
SNORD88B-201ENST00000408454 POMKQ9H5K3 350 aa14.12□□□□□ -0.15
SNORD88B-201ENST00000408454 PDZD7Q9H5P4 517 aa14.12□□□□□ -0.15
SNORD88B-201ENST00000408454 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.12□□□□□ -0.15
SNORD88B-201ENST00000408454 CHST7Q9NS84 486 aa14.12□□□□□ -0.15
SNORD88B-201ENST00000408454 ODF2LQ9ULJ1 636 aa14.12□□□□□ -0.15
SNORD88B-201ENST00000408454 VCANP13611 3396 aa14.11□□□□□ -0.15
SNORD88B-201ENST00000408454 MEIS3P2A8K0S8 358 aa14.11□□□□□ -0.15
SNORD88B-201ENST00000408454 RECQL4O94761 1208 aa14.11□□□□□ -0.15
SNORD88B-201ENST00000408454 EPCAMP16422 314 aa14.11□□□□□ -0.15
SNORD88B-201ENST00000408454 AKAP5P24588 427 aa14.11□□□□□ -0.15
SNORD88B-201ENST00000408454 GJB2P29033 226 aa14.11□□□□□ -0.15
SNORD88B-201ENST00000408454 RPL9P32969 192 aaKnown RBP14.11□□□□□ -0.15
SNORD88B-201ENST00000408454 LONP1P36776 959 aaKnown RBP14.11□□□□□ -0.15
SNORD88B-201ENST00000408454 GRM5P41594 1212 aa14.11□□□□□ -0.15
SNORD88B-201ENST00000408454 PEX3P56589 373 aa14.11□□□□□ -0.15
SNORD88B-201ENST00000408454 UVSSAQ2YD98 709 aa14.11□□□□□ -0.15
SNORD88B-201ENST00000408454 KIAA0319Q5VV43 1072 aa14.11□□□□□ -0.15
SNORD88B-201ENST00000408454 DCLRE1AQ6PJP8 1040 aa14.11□□□□□ -0.15
SNORD88B-201ENST00000408454 TMC5Q6UXY8 1006 aa14.11□□□□□ -0.15
SNORD88B-201ENST00000408454 ZPBP2Q6X784 338 aa14.11□□□□□ -0.15
SNORD88B-201ENST00000408454 TMEM173Q86WV6 379 aaPredicted RBP14.11□□□□□ -0.15
SNORD88B-201ENST00000408454 KREMEN2Q8NCW0 462 aa14.11□□□□□ -0.15
SNORD88B-201ENST00000408454 RIN2Q8WYP3 895 aaPredicted RBP14.11□□□□□ -0.15
SNORD88B-201ENST00000408454 PIK3R5Q8WYR1 880 aa14.11□□□□□ -0.15
SNORD88B-201ENST00000408454 KHSRPQ92945 711 aaKnown RBP eCLIP14.11□□□□□ -0.15
SNORD88B-201ENST00000408454 C11orf16Q9NQ32 467 aa14.11□□□□□ -0.15
SNORD88B-201ENST00000408454 GPRC5CQ9NQ84 441 aa14.11□□□□□ -0.15
SNORD88B-201ENST00000408454 MAFFQ9ULX9 164 aa14.11□□□□□ -0.15
SNORD88B-201ENST00000408454 HES2Q9Y543 173 aa14.11□□□□□ -0.15
SNORD88B-201ENST00000408454 ATG2AQ2TAZ0 1938 aa14.1□□□□□ -0.15
SNORD88B-201ENST00000408454 H7C4K7 107 aa14.1□□□□□ -0.15
SNORD88B-201ENST00000408454 TEX28O15482 410 aa14.1□□□□□ -0.15
SNORD88B-201ENST00000408454 B4GALT5O43286 388 aa14.1□□□□□ -0.15
SNORD88B-201ENST00000408454 TOM1L1O75674 476 aa14.1□□□□□ -0.15
SNORD88B-201ENST00000408454 KRT18P05783 430 aaKnown RBP14.1□□□□□ -0.15
SNORD88B-201ENST00000408454 ST3GAL1Q11201 340 aa14.1□□□□□ -0.15
SNORD88B-201ENST00000408454 TDGQ13569 410 aa14.1□□□□□ -0.15
SNORD88B-201ENST00000408454 HYIQ5T013 277 aa14.1□□□□□ -0.15
SNORD88B-201ENST00000408454 MPZL3Q6UWV2 235 aa14.1□□□□□ -0.15
SNORD88B-201ENST00000408454 HFE2Q6ZVN8 426 aa14.1□□□□□ -0.15
SNORD88B-201ENST00000408454 RNF168Q8IYW5 571 aaPredicted RBP14.1□□□□□ -0.15
SNORD88B-201ENST00000408454 AUTS2Q8WXX7 1259 aa14.1□□□□□ -0.15
SNORD88B-201ENST00000408454 SMG7Q92540 1137 aaKnown RBP14.1□□□□□ -0.15
SNORD88B-201ENST00000408454 ACAP3Q96P50 834 aa14.1□□□□□ -0.15
SNORD88B-201ENST00000408454 NTPCRQ9BSD7 190 aaKnown RBP14.1□□□□□ -0.15
SNORD88B-201ENST00000408454 APOL5Q9BWW9 433 aa14.1□□□□□ -0.15
SNORD88B-201ENST00000408454 CCDC113Q9H0I3 377 aa14.1□□□□□ -0.15
SNORD88B-201ENST00000408454 WDR6Q9NNW5 1121 aaKnown RBP14.1□□□□□ -0.15
SNORD88B-201ENST00000408454 MARCH5Q9NX47 278 aa14.1□□□□□ -0.15
SNORD88B-201ENST00000408454 CCDC39Q9UFE4 941 aa14.1□□□□□ -0.15
SNORD88B-201ENST00000408454 NUB1Q9Y5A7 615 aa14.1□□□□□ -0.15
SNORD88B-201ENST00000408454 PCDHB6Q9Y5E3 794 aa14.1□□□□□ -0.15
SNORD88B-201ENST00000408454 CCDC195A0A1B0GUA6 201 aa14.09□□□□□ -0.15
SNORD88B-201ENST00000408454 CLDN3O15551 220 aa14.09□□□□□ -0.15
SNORD88B-201ENST00000408454 LILRB3O75022 631 aa14.09□□□□□ -0.15
SNORD88B-201ENST00000408454 TBCAO75347 108 aaKnown RBP14.09□□□□□ -0.15
SNORD88B-201ENST00000408454 B3GAT3O94766 335 aa14.09□□□□□ -0.15
SNORD88B-201ENST00000408454 POU2F2P09086 479 aa14.09□□□□□ -0.15
SNORD88B-201ENST00000408454 PLS3P13797 630 aa14.09□□□□□ -0.15
SNORD88B-201ENST00000408454 GBP2P32456 591 aaPredicted RBP14.09□□□□□ -0.15
SNORD88B-201ENST00000408454 ELF1P32519 619 aa14.09□□□□□ -0.15
SNORD88B-201ENST00000408454 MATR3P43243 847 aaKnown RBP eCLIP14.09□□□□□ -0.15
SNORD88B-201ENST00000408454 NPTX2P47972 431 aa14.09□□□□□ -0.15
SNORD88B-201ENST00000408454 ZRSR1Q15695 479 aaKnown RBP14.09□□□□□ -0.15
SNORD88B-201ENST00000408454 PSMD5Q16401 504 aa14.09□□□□□ -0.15
SNORD88B-201ENST00000408454 FAM171A1Q5VUB5 890 aa14.09□□□□□ -0.15
SNORD88B-201ENST00000408454 MTSS1LQ765P7 747 aa14.09□□□□□ -0.15
SNORD88B-201ENST00000408454 ELMOD1Q8N336 334 aa14.09□□□□□ -0.15
SNORD88B-201ENST00000408454 C4orf32Q8N8J7 132 aa14.09□□□□□ -0.15
SNORD88B-201ENST00000408454 SYT2Q8N9I0 419 aaPredicted RBP14.09□□□□□ -0.15
SNORD88B-201ENST00000408454 BICD1Q96G01 975 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms