RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 GPC3P51654 580 aa27.76■■■□□ 2.03
CPNE1-205ENST00000401607 BEX3Q00994 111 aa27.76■■■□□ 2.03
CPNE1-205ENST00000401607 PRPF4BQ13523 1007 aaKnown RBP27.76■■■□□ 2.03
CPNE1-205ENST00000401607 ZNF571Q7Z3V5 609 aaPredicted RBP27.76■■■□□ 2.03
CPNE1-205ENST00000401607 IFIH1Q9BYX4 1025 aaKnown RBP27.76■■■□□ 2.03
CPNE1-205ENST00000401607 BZW2Q9Y6E2 419 aaKnown RBP27.76■■■□□ 2.03
CPNE1-205ENST00000401607 PTPRJQ12913 1337 aa27.75■■■□□ 2.03
CPNE1-205ENST00000401607 CNTNAP2Q9UHC6 1331 aa27.75■■■□□ 2.03
CPNE1-205ENST00000401607 HAS3O00219 553 aa27.75■■■□□ 2.03
CPNE1-205ENST00000401607 CYBAP13498 195 aa27.75■■■□□ 2.03
CPNE1-205ENST00000401607 MFSD10Q14728 455 aa27.75■■■□□ 2.03
CPNE1-205ENST00000401607 FAM187BQ17R55 369 aa27.75■■■□□ 2.03
CPNE1-205ENST00000401607 CCDC122Q5T0U0 273 aa27.75■■■□□ 2.03
CPNE1-205ENST00000401607 ATF7IP2Q5U623 682 aa27.75■■■□□ 2.03
CPNE1-205ENST00000401607 LMBRD2Q68DH5 695 aaPredicted RBP27.75■■■□□ 2.03
CPNE1-205ENST00000401607 KIAA0319LQ8IZA0 1049 aa27.75■■■□□ 2.03
CPNE1-205ENST00000401607 FBXL13Q8NEE6 735 aa27.75■■■□□ 2.03
CPNE1-205ENST00000401607 PPP1R13LQ8WUF5 828 aa27.75■■■□□ 2.03
CPNE1-205ENST00000401607 FNBP1Q96RU3 617 aa27.75■■■□□ 2.03
CPNE1-205ENST00000401607 TCHPQ9BT92 498 aa27.75■■■□□ 2.03
CPNE1-205ENST00000401607 UBE2TQ9NPD8 197 aaPredicted RBP27.75■■■□□ 2.03
CPNE1-205ENST00000401607 PRMT7Q9NVM4 692 aaPredicted RBP27.75■■■□□ 2.03
CPNE1-205ENST00000401607 GUCA1BQ9UMX6 200 aa27.75■■■□□ 2.03
CPNE1-205ENST00000401607 EVI5O60447 810 aa27.74■■■□□ 2.03
CPNE1-205ENST00000401607 TNFSF9P41273 254 aa27.74■■■□□ 2.03
CPNE1-205ENST00000401607 PRKCZQ05513 592 aa27.74■■■□□ 2.03
CPNE1-205ENST00000401607 SLC18A3Q16572 532 aa27.74■■■□□ 2.03
CPNE1-205ENST00000401607 AMHR2Q16671 573 aa27.74■■■□□ 2.03
CPNE1-205ENST00000401607 ARHGAP44Q17R89 818 aa27.74■■■□□ 2.03
CPNE1-205ENST00000401607 MPZL3Q6UWV2 235 aa27.74■■■□□ 2.03
CPNE1-205ENST00000401607 BRSK2Q8IWQ3 736 aa27.74■■■□□ 2.03
CPNE1-205ENST00000401607 MAP7D2Q96T17 732 aa27.74■■■□□ 2.03
CPNE1-205ENST00000401607 RAB20Q9NX57 234 aa27.74■■■□□ 2.03
CPNE1-205ENST00000401607 A0A087X0T9 212 aa27.73■■■□□ 2.03
CPNE1-205ENST00000401607 OGTO15294 1046 aa27.73■■■□□ 2.03
CPNE1-205ENST00000401607 MYL3P08590 195 aa27.73■■■□□ 2.03
CPNE1-205ENST00000401607 FAM228BP0C875 321 aa27.73■■■□□ 2.03
CPNE1-205ENST00000401607 CASQ1P31415 396 aa27.73■■■□□ 2.03
CPNE1-205ENST00000401607 PSEN2P49810 448 aa27.73■■■□□ 2.03
CPNE1-205ENST00000401607 CHMP4BP1P59074 171 aa27.73■■■□□ 2.03
CPNE1-205ENST00000401607 ZNF569Q5MCW4 686 aa27.73■■■□□ 2.03
CPNE1-205ENST00000401607 EEF1DP3Q658K8 133 aa27.73■■■□□ 2.03
CPNE1-205ENST00000401607 CREBZFQ9NS37 354 aa27.73■■■□□ 2.03
CPNE1-205ENST00000401607 MYO1AQ9UBC5 1043 aa27.73■■■□□ 2.03
CPNE1-205ENST00000401607 NRCAMQ92823 1304 aa27.73■■■□□ 2.03
CPNE1-205ENST00000401607 C4BPAP04003 597 aaKnown RBP27.73■■■□□ 2.03
CPNE1-205ENST00000401607 MAGEA1P43355 309 aa27.73■■■□□ 2.03
CPNE1-205ENST00000401607 ZACNQ401N2 412 aa27.73■■■□□ 2.03
CPNE1-205ENST00000401607 MFSD14CQ5VZR4 134 aa27.73■■■□□ 2.03
CPNE1-205ENST00000401607 NFRKBQ6P4R8 1299 aa27.73■■■□□ 2.03
CPNE1-205ENST00000401607 REM2Q8IYK8 340 aaPredicted RBP27.73■■■□□ 2.03
CPNE1-205ENST00000401607 SLC35F6Q8N357 371 aa27.73■■■□□ 2.03
CPNE1-205ENST00000401607 UTP3Q9NQZ2 479 aaKnown RBP eCLIP27.73■■■□□ 2.031e-6■■■■■ 117.8
CPNE1-205ENST00000401607 ADAMTS1Q9UHI8 967 aa27.73■■■□□ 2.03
CPNE1-205ENST00000401607 TNFSF13BQ9Y275 285 aa27.73■■■□□ 2.03
CPNE1-205ENST00000401607 KRT86O43790 486 aa27.72■■■□□ 2.03
CPNE1-205ENST00000401607 CSDE1O75534 798 aaKnown RBP27.72■■■□□ 2.03
CPNE1-205ENST00000401607 TNNI1P19237 187 aa27.72■■■□□ 2.03
CPNE1-205ENST00000401607 HIC1Q14526 733 aa27.72■■■□□ 2.03
CPNE1-205ENST00000401607 FSCN1Q16658 493 aaKnown RBP27.72■■■□□ 2.03
CPNE1-205ENST00000401607 KAT6AQ92794 2004 aa27.72■■■□□ 2.03
CPNE1-205ENST00000401607 KAT5Q92993 513 aa27.72■■■□□ 2.03
CPNE1-205ENST00000401607 CGRRF1Q99675 332 aa27.72■■■□□ 2.03
CPNE1-205ENST00000401607 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP27.72■■■□□ 2.03
CPNE1-205ENST00000401607 L2HGDHQ9H9P8 463 aa27.72■■■□□ 2.03
CPNE1-205ENST00000401607 CPSF3Q9UKF6 684 aaKnown RBP27.72■■■□□ 2.03
CPNE1-205ENST00000401607 DUSP10Q9Y6W6 482 aa27.72■■■□□ 2.03
CPNE1-205ENST00000401607 MBLAC1A4D2B0 266 aaPredicted RBP27.71■■■□□ 2.03
CPNE1-205ENST00000401607 FOXN3O00409 490 aaPredicted RBP27.71■■■□□ 2.03
CPNE1-205ENST00000401607 DUSP11O75319 330 aaKnown RBP27.71■■■□□ 2.03
CPNE1-205ENST00000401607 KIF5AQ12840 1032 aa27.71■■■□□ 2.03
CPNE1-205ENST00000401607 ZNF568Q3ZCX4 644 aa27.71■■■□□ 2.03
CPNE1-205ENST00000401607 TDRD10Q5VZ19 366 aaKnown RBP27.71■■■□□ 2.03
CPNE1-205ENST00000401607 CDR2LQ86X02 465 aaPredicted RBP27.71■■■□□ 2.03
CPNE1-205ENST00000401607 OLIG1Q8TAK6 271 aa27.71■■■□□ 2.03
CPNE1-205ENST00000401607 HELQQ8TDG4 1101 aa27.71■■■□□ 2.03
CPNE1-205ENST00000401607 VTI1AQ96AJ9 217 aa27.71■■■□□ 2.03
CPNE1-205ENST00000401607 KREMEN1Q96MU8 473 aa27.71■■■□□ 2.03
CPNE1-205ENST00000401607 UQCRHLA0A096LP55 91 aa27.71■■■□□ 2.03
CPNE1-205ENST00000401607 MYADML2A6NDP7 307 aa27.71■■■□□ 2.03
CPNE1-205ENST00000401607 PJA2O43164 708 aa27.71■■■□□ 2.03
CPNE1-205ENST00000401607 ZEB2O60315 1214 aa27.71■■■□□ 2.03
CPNE1-205ENST00000401607 UQCRHP07919 91 aa27.71■■■□□ 2.03
CPNE1-205ENST00000401607 ADAM17P78536 824 aa27.71■■■□□ 2.03
CPNE1-205ENST00000401607 NLRP7Q8WX94 980 aa27.71■■■□□ 2.03
CPNE1-205ENST00000401607 TSGA10Q9BZW7 698 aa27.71■■■□□ 2.03
CPNE1-205ENST00000401607 CDT1Q9H211 546 aa27.71■■■□□ 2.03
CPNE1-205ENST00000401607 ANXA13P27216 316 aa27.7■■■□□ 2.02
CPNE1-205ENST00000401607 SP3Q02447 781 aa27.7■■■□□ 2.02
CPNE1-205ENST00000401607 ZNF410Q86VK4 478 aa27.7■■■□□ 2.02
CPNE1-205ENST00000401607 FMNL3Q8IVF7 1028 aa27.7■■■□□ 2.02
CPNE1-205ENST00000401607 NT5C1BQ96P26 610 aa27.7■■■□□ 2.02
CPNE1-205ENST00000401607 SYT11Q9BT88 431 aa27.7■■■□□ 2.02
CPNE1-205ENST00000401607 NENFQ9UMX5 172 aa27.7■■■□□ 2.02
CPNE1-205ENST00000401607 PURAQ00577 322 aaKnown RBP27.69■■■□□ 2.02
CPNE1-205ENST00000401607 TRIM32Q13049 653 aa27.69■■■□□ 2.02
CPNE1-205ENST00000401607 TMEM132AQ24JP5 1023 aa27.69■■■□□ 2.02
CPNE1-205ENST00000401607 PPM1KQ8N3J5 372 aa27.69■■■□□ 2.02
CPNE1-205ENST00000401607 ELMO3Q96BJ8 720 aa27.69■■■□□ 2.02
CPNE1-205ENST00000401607 CASP8AP2Q9UKL3 1982 aa27.68■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms