RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 HOXA7P31268 230 aaPredicted RBP11.44□□□□□ -0.58
CCDC40-204ENST00000397545 FMO5P49326 533 aa11.44□□□□□ -0.58
CCDC40-204ENST00000397545 NAB2Q15742 525 aa11.44□□□□□ -0.58
CCDC40-204ENST00000397545 SLC27A3Q5K4L6 730 aa11.44□□□□□ -0.58
CCDC40-204ENST00000397545 FAM160B2Q86V87 743 aa11.44□□□□□ -0.58
CCDC40-204ENST00000397545 MYLK4Q86YV6 388 aaPredicted RBP11.44□□□□□ -0.58
CCDC40-204ENST00000397545 MMGT1Q8N4V1 131 aa11.44□□□□□ -0.58
CCDC40-204ENST00000397545 PDZD8Q8NEN9 1154 aa11.44□□□□□ -0.58
CCDC40-204ENST00000397545 CPA5Q8WXQ8 436 aa11.44□□□□□ -0.58
CCDC40-204ENST00000397545 FAM161BQ96MY7 647 aa11.44□□□□□ -0.58
CCDC40-204ENST00000397545 TSC22D3Q99576 134 aa11.44□□□□□ -0.58
CCDC40-204ENST00000397545 CYP4F11Q9HBI6 524 aa11.44□□□□□ -0.58
CCDC40-204ENST00000397545 EYA4O95677 639 aa11.44□□□□□ -0.58
CCDC40-204ENST00000397545 P4HBP07237 508 aaKnown RBP11.44□□□□□ -0.58
CCDC40-204ENST00000397545 ASNSP08243 561 aa11.44□□□□□ -0.58
CCDC40-204ENST00000397545 HERVK_113P62684 666 aa11.44□□□□□ -0.58
CCDC40-204ENST00000397545 SLC12A1Q13621 1099 aa11.44□□□□□ -0.58
CCDC40-204ENST00000397545 KCTD2Q14681 263 aa11.44□□□□□ -0.58
CCDC40-204ENST00000397545 CEP55Q53EZ4 464 aa11.44□□□□□ -0.58
CCDC40-204ENST00000397545 ZNF667Q5HYK9 610 aa11.44□□□□□ -0.58
CCDC40-204ENST00000397545 TTI2Q6NXR4 508 aa11.44□□□□□ -0.58
CCDC40-204ENST00000397545 FOXR1Q6PIV2 292 aa11.44□□□□□ -0.58
CCDC40-204ENST00000397545 JAMLQ86YT9 394 aa11.44□□□□□ -0.58
CCDC40-204ENST00000397545 CRLF3Q8IUI8 442 aa11.44□□□□□ -0.58
CCDC40-204ENST00000397545 DEPDC1BQ8WUY9 529 aa11.44□□□□□ -0.58
CCDC40-204ENST00000397545 SPON1Q9HCB6 807 aa11.44□□□□□ -0.58
CCDC40-204ENST00000397545 ZNF446Q9NWS9 450 aa11.44□□□□□ -0.58
CCDC40-204ENST00000397545 DAGLAQ9Y4D2 1042 aa11.44□□□□□ -0.58
CCDC40-204ENST00000397545 FLT1P17948 1338 aa11.44□□□□□ -0.58
CCDC40-204ENST00000397545 SLC37A4O43826 429 aa11.43□□□□□ -0.58
CCDC40-204ENST00000397545 PPFIA2O75334 1257 aa11.43□□□□□ -0.58
CCDC40-204ENST00000397545 GNA15P30679 374 aa11.43□□□□□ -0.58
CCDC40-204ENST00000397545 HNRNPH1P31943 449 aaKnown RBP11.43□□□□□ -0.58
CCDC40-204ENST00000397545 CASP2P42575 452 aa11.43□□□□□ -0.58
CCDC40-204ENST00000397545 ARSEP51690 589 aa11.43□□□□□ -0.58
CCDC40-204ENST00000397545 ALCAMQ13740 583 aa11.43□□□□□ -0.58
CCDC40-204ENST00000397545 RSRC2Q7L4I2 434 aaKnown RBP11.43□□□□□ -0.58
CCDC40-204ENST00000397545 FBXL13Q8NEE6 735 aa11.43□□□□□ -0.58
CCDC40-204ENST00000397545 CASKIN2Q8WXE0 1202 aa11.43□□□□□ -0.58
CCDC40-204ENST00000397545 RBM41Q96IZ5 413 aaKnown RBP11.43□□□□□ -0.58
CCDC40-204ENST00000397545 OSBPL1AQ9BXW6 950 aa11.43□□□□□ -0.58
CCDC40-204ENST00000397545 FAM237AA0A1B0GTK4 181 aa11.43□□□□□ -0.58
CCDC40-204ENST00000397545 HSD17B3P37058 310 aa11.43□□□□□ -0.58
CCDC40-204ENST00000397545 ARFIP2P53365 341 aa11.43□□□□□ -0.58
CCDC40-204ENST00000397545 DHX34Q14147 1143 aaKnown RBP11.43□□□□□ -0.58
CCDC40-204ENST00000397545 TFDP1Q14186 410 aa11.43□□□□□ -0.58
CCDC40-204ENST00000397545 SBK1Q52WX2 424 aa11.43□□□□□ -0.58
CCDC40-204ENST00000397545 C4orf50Q6ZRC1 276 aa11.43□□□□□ -0.58
CCDC40-204ENST00000397545 SPATA21Q7Z572 469 aa11.43□□□□□ -0.58
CCDC40-204ENST00000397545 CCDC117Q8IWD4 279 aaPredicted RBP11.43□□□□□ -0.58
CCDC40-204ENST00000397545 ABTB1Q969K4 478 aaPredicted RBP11.43□□□□□ -0.58
CCDC40-204ENST00000397545 WNT8AQ9H1J5 351 aa11.43□□□□□ -0.58
CCDC40-204ENST00000397545 VPS11Q9H270 941 aa11.43□□□□□ -0.58
CCDC40-204ENST00000397545 ANLNQ9NQW6 1124 aa11.43□□□□□ -0.58
CCDC40-204ENST00000397545 PIM2Q9P1W9 311 aa11.43□□□□□ -0.58
CCDC40-204ENST00000397545 ARHGAP20Q9P2F6 1191 aa11.43□□□□□ -0.58
CCDC40-204ENST00000397545 CICQ96RK0 1608 aaPredicted RBP11.43□□□□□ -0.58
CCDC40-204ENST00000397545 BCL9LQ86UU0 1499 aa11.43□□□□□ -0.58
CCDC40-204ENST00000397545 C4AP0C0L4 1744 aa11.43□□□□□ -0.58
CCDC40-204ENST00000397545 C4BP0C0L5 1744 aa11.43□□□□□ -0.58
CCDC40-204ENST00000397545 COMTP21964 271 aa11.43□□□□□ -0.58
CCDC40-204ENST00000397545 CCND2P30279 289 aa11.43□□□□□ -0.58
CCDC40-204ENST00000397545 CDR2Q01850 454 aa11.43□□□□□ -0.58
CCDC40-204ENST00000397545 WDR75Q8IWA0 830 aaKnown RBP11.43□□□□□ -0.58
CCDC40-204ENST00000397545 AGR3Q8TD06 166 aa11.43□□□□□ -0.58
CCDC40-204ENST00000397545 CDHR1Q96JP9 859 aa11.43□□□□□ -0.58
CCDC40-204ENST00000397545 FAM81BQ96LP2 452 aa11.43□□□□□ -0.58
CCDC40-204ENST00000397545 STK33Q9BYT3 514 aa11.43□□□□□ -0.58
CCDC40-204ENST00000397545 EHD4Q9H223 541 aa11.43□□□□□ -0.58
CCDC40-204ENST00000397545 CD248Q9HCU0 757 aa11.43□□□□□ -0.58
CCDC40-204ENST00000397545 VCX3AQ9NNX9 186 aa11.43□□□□□ -0.58
CCDC40-204ENST00000397545 APEX2Q9UBZ4 518 aa11.43□□□□□ -0.58
CCDC40-204ENST00000397545 PRDM4Q9UKN5 801 aa11.43□□□□□ -0.58
CCDC40-204ENST00000397545 IL1RL1Q01638 556 aa11.43□□□□□ -0.58
CCDC40-204ENST00000397545 SPP2Q13103 211 aa11.43□□□□□ -0.58
CCDC40-204ENST00000397545 PTGISQ16647 500 aa11.43□□□□□ -0.58
CCDC40-204ENST00000397545 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.43□□□□□ -0.58
CCDC40-204ENST00000397545 C2CD6Q53TS8 623 aa11.43□□□□□ -0.58
CCDC40-204ENST00000397545 CDKAL1Q5VV42 579 aa11.43□□□□□ -0.58
CCDC40-204ENST00000397545 C1orf146Q5VVC0 180 aa11.43□□□□□ -0.58
CCDC40-204ENST00000397545 RHOT1Q8IXI2 618 aa11.43□□□□□ -0.58
CCDC40-204ENST00000397545 RYBPQ8N488 228 aaPredicted RBP11.43□□□□□ -0.58
CCDC40-204ENST00000397545 SNF8Q96H20 258 aa11.43□□□□□ -0.58
CCDC40-204ENST00000397545 LRRC4Q9HBW1 653 aa11.43□□□□□ -0.58
CCDC40-204ENST00000397545 INTS13Q9NVM9 706 aa11.43□□□□□ -0.58
CCDC40-204ENST00000397545 STOML1Q9UBI4 398 aa11.43□□□□□ -0.58
CCDC40-204ENST00000397545 SEL1LQ9UBV2 794 aa11.43□□□□□ -0.58
CCDC40-204ENST00000397545 SLC4A7Q9Y6M7 1214 aa11.43□□□□□ -0.58
CCDC40-204ENST00000397545 PIK3R2O00459 728 aa11.42□□□□□ -0.58
CCDC40-204ENST00000397545 MED7O43513 233 aa11.42□□□□□ -0.58
CCDC40-204ENST00000397545 NDUFB10O96000 172 aa11.42□□□□□ -0.58
CCDC40-204ENST00000397545 ACOT2P49753 483 aa11.42□□□□□ -0.58
CCDC40-204ENST00000397545 ORC2Q13416 577 aaPredicted RBP11.42□□□□□ -0.58
CCDC40-204ENST00000397545 MDH1BQ5I0G3 518 aa11.42□□□□□ -0.58
CCDC40-204ENST00000397545 WDR93Q6P2C0 686 aa11.42□□□□□ -0.58
CCDC40-204ENST00000397545 LRGUKQ96M69 825 aa11.42□□□□□ -0.58
CCDC40-204ENST00000397545 TRAIPQ9BWF2 469 aa11.42□□□□□ -0.58
CCDC40-204ENST00000397545 CCDC68Q9H2F9 335 aa11.42□□□□□ -0.58
CCDC40-204ENST00000397545 RPF1Q9H9Y2 349 aaKnown RBP11.42□□□□□ -0.58
CCDC40-204ENST00000397545 SLC9A2Q9UBY0 812 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms