RNA–Protein interactions for RNA: ENST00000393811.6

R3HDM2-203, Transcript of R3H domain containing 2, humanhuman

TSL 1 (best)

Gene R3HDM2, Length 3,778 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-203ENST00000393811 HOXD13P35453 343 aa12.59□□□□□ -0.39
R3HDM2-203ENST00000393811 RRP1BQ14684 758 aaKnown RBP12.59□□□□□ -0.39
R3HDM2-203ENST00000393811 XXYLT1Q8NBI6 393 aa12.59□□□□□ -0.39
R3HDM2-203ENST00000393811 HAUS1Q96CS2 278 aa12.59□□□□□ -0.39
R3HDM2-203ENST00000393811 NAF1Q96HR8 494 aaKnown RBP12.59□□□□□ -0.39
R3HDM2-203ENST00000393811 DDX4Q9NQI0 724 aaKnown RBP12.59□□□□□ -0.39
R3HDM2-203ENST00000393811 MYH1P12882 1939 aa12.59□□□□□ -0.39
R3HDM2-203ENST00000393811 MYH4Q9Y623 1939 aa12.59□□□□□ -0.39
R3HDM2-203ENST00000393811 MYO3BQ8WXR4 1341 aa12.59□□□□□ -0.39
R3HDM2-203ENST00000393811 POLR2MP0CAP2 368 aa12.58□□□□□ -0.39
R3HDM2-203ENST00000393811 BMP3P12645 472 aa12.58□□□□□ -0.39
R3HDM2-203ENST00000393811 MAN1A1P33908 653 aa12.58□□□□□ -0.39
R3HDM2-203ENST00000393811 CCNHP51946 323 aaPredicted RBP12.58□□□□□ -0.39
R3HDM2-203ENST00000393811 MKRN3Q13064 507 aaKnown RBP12.58□□□□□ -0.39
R3HDM2-203ENST00000393811 RASA3Q14644 834 aa12.58□□□□□ -0.39
R3HDM2-203ENST00000393811 FAM102BQ5T8I3 360 aa12.58□□□□□ -0.39
R3HDM2-203ENST00000393811 SLC47A2Q86VL8 602 aa12.58□□□□□ -0.39
R3HDM2-203ENST00000393811 ACCSQ96QU6 501 aa12.58□□□□□ -0.39
R3HDM2-203ENST00000393811 VCXQ9H320 206 aa12.58□□□□□ -0.39
R3HDM2-203ENST00000393811 PCYOX1Q9UHG3 505 aa12.58□□□□□ -0.39
R3HDM2-203ENST00000393811 NAALADL1Q9UQQ1 740 aa12.58□□□□□ -0.39
R3HDM2-203ENST00000393811 A0A0G2JND7 137 aa12.58□□□□□ -0.4
R3HDM2-203ENST00000393811 FAM47DPA6NHR8 397 aa12.58□□□□□ -0.4
R3HDM2-203ENST00000393811 GOLGA8SH3BPF8 625 aa12.58□□□□□ -0.4
R3HDM2-203ENST00000393811 GOLGA8MH3BSY2 632 aa12.58□□□□□ -0.4
R3HDM2-203ENST00000393811 TBX3O15119 743 aa12.58□□□□□ -0.4
R3HDM2-203ENST00000393811 EIF3DO15371 548 aaKnown RBP eCLIP12.58□□□□□ -0.4
R3HDM2-203ENST00000393811 PLS3P13797 630 aa12.58□□□□□ -0.4
R3HDM2-203ENST00000393811 NSFP46459 744 aaKnown RBP12.58□□□□□ -0.4
R3HDM2-203ENST00000393811 DLG4P78352 724 aa12.58□□□□□ -0.4
R3HDM2-203ENST00000393811 SP4Q02446 784 aa12.58□□□□□ -0.4
R3HDM2-203ENST00000393811 RIPK1Q13546 671 aa12.58□□□□□ -0.4
R3HDM2-203ENST00000393811 RBBP5Q15291 538 aaKnown RBP12.58□□□□□ -0.4
R3HDM2-203ENST00000393811 ABCB5Q2M3G0 1257 aa12.58□□□□□ -0.4
R3HDM2-203ENST00000393811 PADI6Q6TGC4 694 aa12.58□□□□□ -0.4
R3HDM2-203ENST00000393811 CCDC89Q8N998 374 aa12.58□□□□□ -0.4
R3HDM2-203ENST00000393811 RMDN2Q96LZ7 410 aa12.58□□□□□ -0.4
R3HDM2-203ENST00000393811 RPS6KC1Q96S38 1066 aa12.58□□□□□ -0.4
R3HDM2-203ENST00000393811 TEKT3Q9BXF9 490 aa12.58□□□□□ -0.4
R3HDM2-203ENST00000393811 CHST7Q9NS84 486 aa12.58□□□□□ -0.4
R3HDM2-203ENST00000393811 KLHL11Q9NVR0 708 aa12.58□□□□□ -0.4
R3HDM2-203ENST00000393811 EDIL3O43854 480 aa12.58□□□□□ -0.4
R3HDM2-203ENST00000393811 DCTN3O75935 186 aa12.58□□□□□ -0.4
R3HDM2-203ENST00000393811 PTGIRP43119 386 aa12.58□□□□□ -0.4
R3HDM2-203ENST00000393811 POLE2P56282 527 aa12.58□□□□□ -0.4
R3HDM2-203ENST00000393811 MTM1Q13496 603 aa12.58□□□□□ -0.4
R3HDM2-203ENST00000393811 ZNF268Q14587 947 aaPredicted RBP12.58□□□□□ -0.4
R3HDM2-203ENST00000393811 C11orf63Q6NUN7 778 aa12.58□□□□□ -0.4
R3HDM2-203ENST00000393811 ZNF720Q7Z2F6 126 aa12.58□□□□□ -0.4
R3HDM2-203ENST00000393811 USP37Q86T82 979 aa12.58□□□□□ -0.4
R3HDM2-203ENST00000393811 NGLY1Q96IV0 654 aa12.58□□□□□ -0.4
R3HDM2-203ENST00000393811 CFAP57Q96MR6 1250 aa12.58□□□□□ -0.4
R3HDM2-203ENST00000393811 RBM15Q96T37 977 aaKnown RBP eCLIP12.58□□□□□ -0.4
R3HDM2-203ENST00000393811 LXNQ9BS40 222 aa12.58□□□□□ -0.4
R3HDM2-203ENST00000393811 TRAIPQ9BWF2 469 aa12.58□□□□□ -0.4
R3HDM2-203ENST00000393811 IQCGQ9H095 443 aaKnown RBP12.58□□□□□ -0.4
R3HDM2-203ENST00000393811 ALG13Q9NP73 1137 aaKnown RBP12.58□□□□□ -0.4
R3HDM2-203ENST00000393811 OLFML3Q9NRN5 406 aa12.58□□□□□ -0.4
R3HDM2-203ENST00000393811 PRELPP51888 382 aa12.57□□□□□ -0.4
R3HDM2-203ENST00000393811 PEX3P56589 373 aa12.57□□□□□ -0.4
R3HDM2-203ENST00000393811 POU5F1Q01860 360 aaKnown RBP12.57□□□□□ -0.4
R3HDM2-203ENST00000393811 RNASELQ05823 741 aaKnown RBP12.57□□□□□ -0.4
R3HDM2-203ENST00000393811 LIN9Q5TKA1 542 aa12.57□□□□□ -0.4
R3HDM2-203ENST00000393811 PASD1Q8IV76 773 aa12.57□□□□□ -0.4
R3HDM2-203ENST00000393811 BBOF1Q8ND07 529 aa12.57□□□□□ -0.4
R3HDM2-203ENST00000393811 CKAP2Q8WWK9 683 aa12.57□□□□□ -0.4
R3HDM2-203ENST00000393811 GRAMD1AQ96CP6 724 aa12.57□□□□□ -0.4
R3HDM2-203ENST00000393811 CBWD1Q9BRT8 395 aa12.57□□□□□ -0.4
R3HDM2-203ENST00000393811 TRABDQ9H4I3 376 aa12.57□□□□□ -0.4
R3HDM2-203ENST00000393811 SEL1LQ9UBV2 794 aa12.57□□□□□ -0.4
R3HDM2-203ENST00000393811 ZFP69BQ9UJL9 534 aa12.57□□□□□ -0.4
R3HDM2-203ENST00000393811 O00370 1275 aa12.57□□□□□ -0.4
R3HDM2-203ENST00000393811 NFIAQ12857 509 aa12.57□□□□□ -0.4
R3HDM2-203ENST00000393811 FAM196AQ6ZSG2 479 aa12.57□□□□□ -0.4
R3HDM2-203ENST00000393811 RFX8Q6ZV50 586 aa12.57□□□□□ -0.4
R3HDM2-203ENST00000393811 SLC5A5Q92911 643 aa12.57□□□□□ -0.4
R3HDM2-203ENST00000393811 ADAM7Q9H2U9 754 aa12.57□□□□□ -0.4
R3HDM2-203ENST00000393811 USH1CQ9Y6N9 552 aa12.57□□□□□ -0.4
R3HDM2-203ENST00000393811 SNED1Q8TER0 1413 aa12.57□□□□□ -0.4
R3HDM2-203ENST00000393811 SLC16A4O15374 487 aa12.57□□□□□ -0.4
R3HDM2-203ENST00000393811 CD58P19256 250 aa12.57□□□□□ -0.4
R3HDM2-203ENST00000393811 CTCFP49711 727 aaPredicted RBP12.57□□□□□ -0.4
R3HDM2-203ENST00000393811 APBB1IPQ7Z5R6 666 aaPredicted RBP12.57□□□□□ -0.4
R3HDM2-203ENST00000393811 ATL2Q8NHH9 583 aa12.57□□□□□ -0.4
R3HDM2-203ENST00000393811 MORC4Q8TE76 937 aa12.57□□□□□ -0.4
R3HDM2-203ENST00000393811 DCAF4Q8WV16 495 aa12.57□□□□□ -0.4
R3HDM2-203ENST00000393811 SEC14L1Q92503 715 aa12.57□□□□□ -0.4
R3HDM2-203ENST00000393811 ART4Q93070 314 aa12.57□□□□□ -0.4
R3HDM2-203ENST00000393811 TMEM206Q9H813 350 aa12.57□□□□□ -0.4
R3HDM2-203ENST00000393811 PHTF1Q9UMS5 762 aa12.57□□□□□ -0.4
R3HDM2-203ENST00000393811 CACNA1SQ13698 1873 aa12.57□□□□□ -0.4
R3HDM2-203ENST00000393811 MEIS2O14770 477 aa12.56□□□□□ -0.4
R3HDM2-203ENST00000393811 ATP5HO75947 161 aa12.56□□□□□ -0.4
R3HDM2-203ENST00000393811 CALCAP01258 141 aa12.56□□□□□ -0.4
R3HDM2-203ENST00000393811 SHMT1P34896 483 aa12.56□□□□□ -0.4
R3HDM2-203ENST00000393811 CLK2P49760 499 aaKnown RBP12.56□□□□□ -0.4
R3HDM2-203ENST00000393811 BNIP1Q12981 228 aa12.56□□□□□ -0.4
R3HDM2-203ENST00000393811 WDR44Q5JSH3 913 aa12.56□□□□□ -0.4
R3HDM2-203ENST00000393811 CCDC62Q6P9F0 684 aa12.56□□□□□ -0.4
R3HDM2-203ENST00000393811 ETNPPLQ8TBG4 499 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms