RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 FAM109BQ6ICB4 259 aaPredicted RBP14.78□□□□□ -0.04
PTN-202ENST00000393083 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.78□□□□□ -0.04
PTN-202ENST00000393083 IFNLR1Q8IU57 520 aaPredicted RBP14.78□□□□□ -0.04
PTN-202ENST00000393083 RNF149Q8NC42 400 aa14.78□□□□□ -0.04
PTN-202ENST00000393083 DEPTORQ8TB45 409 aa14.78□□□□□ -0.04
PTN-202ENST00000393083 LINC01599Q8WXQ3 324 aa14.78□□□□□ -0.04
PTN-202ENST00000393083 SCLT1Q96NL6 688 aa14.78□□□□□ -0.04
PTN-202ENST00000393083 MINDY3Q9H8M7 445 aa14.78□□□□□ -0.04
PTN-202ENST00000393083 METTL14Q9HCE5 456 aaKnown RBP14.78□□□□□ -0.04
PTN-202ENST00000393083 ARMCX3Q9UH62 379 aaPredicted RBP14.78□□□□□ -0.04
PTN-202ENST00000393083 PYCARDQ9ULZ3 195 aa14.78□□□□□ -0.04
PTN-202ENST00000393083 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.78□□□□□ -0.04
PTN-202ENST00000393083 SLC4A7Q9Y6M7 1214 aa14.78□□□□□ -0.04
PTN-202ENST00000393083 TISP43B9A030 160 aa14.77□□□□□ -0.04
PTN-202ENST00000393083 ENPP3O14638 875 aa14.77□□□□□ -0.04
PTN-202ENST00000393083 GYPCP04921 128 aa14.77□□□□□ -0.04
PTN-202ENST00000393083 FGFR4P22455 802 aa14.77□□□□□ -0.04
PTN-202ENST00000393083 PSMC2P35998 433 aaKnown RBP14.77□□□□□ -0.04
PTN-202ENST00000393083 PTENP60484 403 aa14.77□□□□□ -0.04
PTN-202ENST00000393083 SNRPFP62306 86 aaKnown RBP14.77□□□□□ -0.04
PTN-202ENST00000393083 DEFB103AP81534 67 aa14.77□□□□□ -0.04
PTN-202ENST00000393083 CCZ1BP86790 482 aa14.77□□□□□ -0.04
PTN-202ENST00000393083 CCZ1P86791 482 aaPredicted RBP14.77□□□□□ -0.04
PTN-202ENST00000393083 NFX1Q12986 1120 aaKnown RBP14.77□□□□□ -0.04
PTN-202ENST00000393083 MYBPC2Q14324 1141 aa14.77□□□□□ -0.04
PTN-202ENST00000393083 SYCP1Q15431 976 aa14.77□□□□□ -0.04
PTN-202ENST00000393083 FAM43BQ6ZT52 329 aaPredicted RBP14.77□□□□□ -0.04
PTN-202ENST00000393083 SRGAP1Q7Z6B7 1085 aa14.77□□□□□ -0.04
PTN-202ENST00000393083 SLC9A9Q8IVB4 645 aa14.77□□□□□ -0.04
PTN-202ENST00000393083 C12orf56Q8IXR9 622 aa14.77□□□□□ -0.04
PTN-202ENST00000393083 FAM186BQ8IYM0 893 aa14.77□□□□□ -0.04
PTN-202ENST00000393083 PCMTD1Q96MG8 357 aaPredicted RBP14.77□□□□□ -0.04
PTN-202ENST00000393083 ERGIC2Q96RQ1 377 aa14.77□□□□□ -0.04
PTN-202ENST00000393083 MKNK1Q9BUB5 465 aa14.77□□□□□ -0.04
PTN-202ENST00000393083 FTHL17Q9BXU8 183 aa14.77□□□□□ -0.04
PTN-202ENST00000393083 NFKBIZQ9BYH8 718 aa14.77□□□□□ -0.04
PTN-202ENST00000393083 DMAC2Q9NW81 257 aa14.77□□□□□ -0.04
PTN-202ENST00000393083 AKR1B15C9JRZ8 316 aaPredicted RBP14.77□□□□□ -0.05
PTN-202ENST00000393083 NRDCO43847 1150 aa14.77□□□□□ -0.05
PTN-202ENST00000393083 MGEA5O60502 916 aa14.77□□□□□ -0.05
PTN-202ENST00000393083 MFAP3LO75121 409 aa14.77□□□□□ -0.05
PTN-202ENST00000393083 PPP2R3AQ06190 1150 aa14.77□□□□□ -0.05
PTN-202ENST00000393083 TFDP1Q14186 410 aa14.77□□□□□ -0.05
PTN-202ENST00000393083 DSC3Q14574 896 aa14.77□□□□□ -0.05
PTN-202ENST00000393083 DCAF17Q5H9S7 520 aaPredicted RBP14.77□□□□□ -0.05
PTN-202ENST00000393083 TC2NQ8N9U0 490 aa14.77□□□□□ -0.05
PTN-202ENST00000393083 PHOSPHO2Q8TCD6 241 aa14.77□□□□□ -0.05
PTN-202ENST00000393083 CPLX3Q8WVH0 158 aa14.77□□□□□ -0.05
PTN-202ENST00000393083 INO80BQ9C086 356 aaPredicted RBP14.77□□□□□ -0.05
PTN-202ENST00000393083 TSPYL2Q9H2G4 693 aaPredicted RBP14.77□□□□□ -0.05
PTN-202ENST00000393083 FRMD4BQ9Y2L6 1034 aa14.77□□□□□ -0.05
PTN-202ENST00000393083 PHLPP2Q6ZVD8 1323 aa14.76□□□□□ -0.05
PTN-202ENST00000393083 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.76□□□□□ -0.05
PTN-202ENST00000393083 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.76□□□□□ -0.05
PTN-202ENST00000393083 GRXCR1A8MXD5 290 aa14.76□□□□□ -0.05
PTN-202ENST00000393083 SOX1O00570 391 aaPredicted RBP14.76□□□□□ -0.05
PTN-202ENST00000393083 EXOC3O60645 756 aa14.76□□□□□ -0.05
PTN-202ENST00000393083 ATP2A2P16615 1042 aaKnown RBP14.76□□□□□ -0.05
PTN-202ENST00000393083 SCP2P22307 547 aa14.76□□□□□ -0.05
PTN-202ENST00000393083 CASP14P31944 242 aa14.76□□□□□ -0.05
PTN-202ENST00000393083 PHKA2P46019 1235 aa14.76□□□□□ -0.05
PTN-202ENST00000393083 ADKP55263 362 aaKnown RBP14.76□□□□□ -0.05
PTN-202ENST00000393083 STRN3Q13033 797 aa14.76□□□□□ -0.05
PTN-202ENST00000393083 CDCA2Q69YH5 1023 aaPredicted RBP14.76□□□□□ -0.05
PTN-202ENST00000393083 TAS1R3Q7RTX0 852 aa14.76□□□□□ -0.05
PTN-202ENST00000393083 CCDC112Q8NEF3 446 aa14.76□□□□□ -0.05
PTN-202ENST00000393083 BICD1Q96G01 975 aa14.76□□□□□ -0.05
PTN-202ENST00000393083 SLC9A7Q96T83 725 aa14.76□□□□□ -0.05
PTN-202ENST00000393083 CBWD1Q9BRT8 395 aa14.76□□□□□ -0.05
PTN-202ENST00000393083 PCIF1Q9H4Z3 704 aa14.76□□□□□ -0.05
PTN-202ENST00000393083 MICAL3Q7RTP6 2002 aa14.76□□□□□ -0.05
PTN-202ENST00000393083 ANKRD63C9JTQ0 380 aa14.75□□□□□ -0.05
PTN-202ENST00000393083 HNRNPDLO14979 420 aaKnown RBP14.75□□□□□ -0.05
PTN-202ENST00000393083 SKILP12757 684 aa14.75□□□□□ -0.05
PTN-202ENST00000393083 KCNJ6P48051 423 aa14.75□□□□□ -0.05
PTN-202ENST00000393083 KLK7P49862 253 aa14.75□□□□□ -0.05
PTN-202ENST00000393083 FXR1P51114 621 aaKnown RBP eCLIP14.75□□□□□ -0.05
PTN-202ENST00000393083 MBTD1Q05BQ5 628 aa14.75□□□□□ -0.05
PTN-202ENST00000393083 TCERG1LQ5VWI1 586 aa14.75□□□□□ -0.05
PTN-202ENST00000393083 TMCO2Q7Z6W1 182 aaPredicted RBP14.75□□□□□ -0.05
PTN-202ENST00000393083 CNGA4Q8IV77 575 aa14.75□□□□□ -0.05
PTN-202ENST00000393083 CRIPAKQ8N1N5 446 aa14.75□□□□□ -0.05
PTN-202ENST00000393083 KCNN1Q92952 543 aa14.75□□□□□ -0.05
PTN-202ENST00000393083 ADAM2Q99965 735 aa14.75□□□□□ -0.05
PTN-202ENST00000393083 RGS18Q9NS28 235 aa14.75□□□□□ -0.05
PTN-202ENST00000393083 HSPBP1Q9NZL4 362 aa14.75□□□□□ -0.05
PTN-202ENST00000393083 SIK3Q9Y2K2 1263 aa14.75□□□□□ -0.05
PTN-202ENST00000393083 AFPP02771 609 aaKnown RBP14.74□□□□□ -0.05
PTN-202ENST00000393083 AMHP03971 560 aa14.74□□□□□ -0.05
PTN-202ENST00000393083 TRIM21P19474 475 aaKnown RBP14.74□□□□□ -0.05
PTN-202ENST00000393083 SMAD3P84022 425 aaKnown RBP14.74□□□□□ -0.05
PTN-202ENST00000393083 KCNH2Q12809 1159 aa14.74□□□□□ -0.05
PTN-202ENST00000393083 AMHR2Q16671 573 aa14.74□□□□□ -0.05
PTN-202ENST00000393083 SLC39A4Q6P5W5 647 aa14.74□□□□□ -0.05
PTN-202ENST00000393083 HERC6Q8IVU3 1022 aa14.74□□□□□ -0.05
PTN-202ENST00000393083 XXYLT1Q8NBI6 393 aa14.74□□□□□ -0.05
PTN-202ENST00000393083 TMEM174Q8WUU8 243 aa14.74□□□□□ -0.05
PTN-202ENST00000393083 TOP1MTQ969P6 601 aa14.74□□□□□ -0.05
PTN-202ENST00000393083 BORCS6Q96GS4 357 aa14.74□□□□□ -0.05
PTN-202ENST00000393083 NUP58Q9BVL2 599 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms