RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 C18orf8Q96DM3 657 aa10.92□□□□□ -0.66
PKP4-201ENST00000389757 TRPC7Q9HCX4 862 aa10.92□□□□□ -0.66
PKP4-201ENST00000389757 NKRFO15226 690 aaKnown RBP eCLIP10.92□□□□□ -0.667e-8■□□□□ 10.2
PKP4-201ENST00000389757 SLC37A4O43826 429 aa10.92□□□□□ -0.66
PKP4-201ENST00000389757 BFSP2Q13515 415 aa10.92□□□□□ -0.66
PKP4-201ENST00000389757 SNX17Q15036 470 aa10.92□□□□□ -0.66
PKP4-201ENST00000389757 DNERQ8NFT8 737 aa10.92□□□□□ -0.66
PKP4-201ENST00000389757 PXMP2Q9NR77 195 aa10.92□□□□□ -0.66
PKP4-201ENST00000389757 LRRC4BQ9NT99 713 aa10.92□□□□□ -0.66
PKP4-201ENST00000389757 TUBE1Q9UJT0 475 aa10.92□□□□□ -0.66
PKP4-201ENST00000389757 MID2Q9UJV3 735 aa10.92□□□□□ -0.66
PKP4-201ENST00000389757 MROH1Q8NDA8 1641 aa10.92□□□□□ -0.66
PKP4-201ENST00000389757 NFIBO00712 420 aa10.92□□□□□ -0.66
PKP4-201ENST00000389757 STRNO43815 780 aa10.92□□□□□ -0.66
PKP4-201ENST00000389757 ARL4CP56559 192 aa10.92□□□□□ -0.66
PKP4-201ENST00000389757 PCNX4Q63HM2 1172 aa10.92□□□□□ -0.66
PKP4-201ENST00000389757 HEATR6Q6AI08 1181 aaKnown RBP10.92□□□□□ -0.66
PKP4-201ENST00000389757 IRAK4Q9NWZ3 460 aa10.92□□□□□ -0.66
PKP4-201ENST00000389757 TCRBV5S4A2TA0A5A2 114 aa10.92□□□□□ -0.66
PKP4-201ENST00000389757 KPNA6O60684 536 aa10.92□□□□□ -0.66
PKP4-201ENST00000389757 NOL3O60936 208 aaKnown RBP10.92□□□□□ -0.66
PKP4-201ENST00000389757 PDGFRBP09619 1106 aa10.92□□□□□ -0.66
PKP4-201ENST00000389757 KRT17Q04695 432 aa10.92□□□□□ -0.66
PKP4-201ENST00000389757 USP49Q70CQ1 688 aa10.92□□□□□ -0.66
PKP4-201ENST00000389757 SYT2Q8N9I0 419 aaPredicted RBP10.92□□□□□ -0.66
PKP4-201ENST00000389757 MAGEB5Q9BZ81 275 aa10.92□□□□□ -0.66
PKP4-201ENST00000389757 WDR35Q9P2L0 1181 aa10.92□□□□□ -0.66
PKP4-201ENST00000389757 SSTR3P32745 418 aaPredicted RBP10.91□□□□□ -0.66
PKP4-201ENST00000389757 SLC26A2P50443 739 aa10.91□□□□□ -0.66
PKP4-201ENST00000389757 PAPOLAP51003 745 aaKnown RBP10.91□□□□□ -0.66
PKP4-201ENST00000389757 SEC23AQ15436 765 aa10.91□□□□□ -0.66
PKP4-201ENST00000389757 ITPRIPL1Q6GPH6 555 aa10.91□□□□□ -0.66
PKP4-201ENST00000389757 KSR1Q8IVT5 923 aa10.91□□□□□ -0.66
PKP4-201ENST00000389757 CACNA2D3Q8IZS8 1091 aa10.91□□□□□ -0.66
PKP4-201ENST00000389757 SPDYE1Q8NFV5 336 aaPredicted RBP10.91□□□□□ -0.66
PKP4-201ENST00000389757 SYTL5Q8TDW5 730 aaPredicted RBP10.91□□□□□ -0.66
PKP4-201ENST00000389757 STK33Q9BYT3 514 aa10.91□□□□□ -0.66
PKP4-201ENST00000389757 KCNQ5Q9NR82 932 aa10.91□□□□□ -0.66
PKP4-201ENST00000389757 INTS9Q9NV88 658 aaKnown RBP10.91□□□□□ -0.66
PKP4-201ENST00000389757 LIMA1Q9UHB6 759 aaKnown RBP10.91□□□□□ -0.66
PKP4-201ENST00000389757 ARP10275 920 aa10.91□□□□□ -0.66
PKP4-201ENST00000389757 KRT3P12035 628 aa10.91□□□□□ -0.66
PKP4-201ENST00000389757 ZFXP17010 805 aaPredicted RBP10.91□□□□□ -0.66
PKP4-201ENST00000389757 KLC3Q6P597 504 aa10.91□□□□□ -0.66
PKP4-201ENST00000389757 RBBP8NLQ8NC74 664 aaPredicted RBP10.91□□□□□ -0.66
PKP4-201ENST00000389757 RFFLQ8WZ73 363 aa10.91□□□□□ -0.66
PKP4-201ENST00000389757 SEPT5Q99719 369 aaPredicted RBP10.91□□□□□ -0.66
PKP4-201ENST00000389757 EPAS1Q99814 870 aa10.91□□□□□ -0.66
PKP4-201ENST00000389757 PDCD2LQ9BRP1 358 aa10.91□□□□□ -0.66
PKP4-201ENST00000389757 MKNK1Q9BUB5 465 aa10.91□□□□□ -0.66
PKP4-201ENST00000389757 ANO9A1A5B4 782 aa10.91□□□□□ -0.66
PKP4-201ENST00000389757 VIL1P09327 827 aaKnown RBP10.91□□□□□ -0.66
PKP4-201ENST00000389757 MUTP22033 750 aa10.91□□□□□ -0.66
PKP4-201ENST00000389757 PNPLA4P41247 253 aa10.91□□□□□ -0.66
PKP4-201ENST00000389757 CUL1Q13616 776 aa10.91□□□□□ -0.66
PKP4-201ENST00000389757 CDKL3Q8IVW4 592 aaPredicted RBP10.91□□□□□ -0.66
PKP4-201ENST00000389757 DHX40Q8IX18 779 aaKnown RBP10.91□□□□□ -0.66
PKP4-201ENST00000389757 SH3TC2Q8TF17 1288 aa10.91□□□□□ -0.66
PKP4-201ENST00000389757 WHAMMQ8TF30 809 aa10.91□□□□□ -0.66
PKP4-201ENST00000389757 MED15Q96RN5 788 aa10.91□□□□□ -0.66
PKP4-201ENST00000389757 NT5C1AQ9BXI3 368 aa10.91□□□□□ -0.66
PKP4-201ENST00000389757 VCXQ9H320 206 aa10.91□□□□□ -0.66
PKP4-201ENST00000389757 STARD7Q9NQZ5 370 aa10.91□□□□□ -0.66
PKP4-201ENST00000389757 GOLGA8QA0A0J9YX86 632 aa10.91□□□□□ -0.66
PKP4-201ENST00000389757 GOLGA8OA6NCC3 632 aa10.91□□□□□ -0.66
PKP4-201ENST00000389757 GOLGA8NF8WBI6 632 aa10.91□□□□□ -0.66
PKP4-201ENST00000389757 HSD17B4P51659 736 aa10.91□□□□□ -0.66
PKP4-201ENST00000389757 JADE1Q6IE81 842 aa10.91□□□□□ -0.66
PKP4-201ENST00000389757 ZNF512Q96ME7 567 aaPredicted RBP10.91□□□□□ -0.66
PKP4-201ENST00000389757 TRPV6Q9H1D0 765 aa10.91□□□□□ -0.66
PKP4-201ENST00000389757 RIOX1Q9H6W3 641 aa10.91□□□□□ -0.66
PKP4-201ENST00000389757 RTN2O75298 545 aa10.9□□□□□ -0.66
PKP4-201ENST00000389757 HLA-DRAP01903 254 aa10.9□□□□□ -0.66
PKP4-201ENST00000389757 OAZ1P54368 228 aa10.9□□□□□ -0.66
PKP4-201ENST00000389757 CDH6P55285 790 aa10.9□□□□□ -0.66
PKP4-201ENST00000389757 STX1BP61266 288 aa10.9□□□□□ -0.66
PKP4-201ENST00000389757 ARID5BQ14865 1188 aa10.9□□□□□ -0.66
PKP4-201ENST00000389757 WNT8AQ9H1J5 351 aa10.9□□□□□ -0.66
PKP4-201ENST00000389757 PLEKHA5Q9HAU0 1116 aa10.9□□□□□ -0.66
PKP4-201ENST00000389757 TMEM8AQ9HCN3 771 aa10.9□□□□□ -0.66
PKP4-201ENST00000389757 DDX4Q9NQI0 724 aaKnown RBP10.9□□□□□ -0.66
PKP4-201ENST00000389757 GPRC5DQ9NZD1 345 aa10.9□□□□□ -0.66
PKP4-201ENST00000389757 CAPN11Q9UMQ6 739 aa10.9□□□□□ -0.66
PKP4-201ENST00000389757 UBQLN1Q9UMX0 589 aaKnown RBP10.9□□□□□ -0.66
PKP4-201ENST00000389757 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.9□□□□□ -0.661e-6■■■■□ 23.2
PKP4-201ENST00000389757 PRG3Q9Y2Y8 225 aaPredicted RBP10.9□□□□□ -0.66
PKP4-201ENST00000389757 VWA5AO00534 786 aa10.9□□□□□ -0.66
PKP4-201ENST00000389757 SERPINB6P35237 376 aa10.9□□□□□ -0.66
PKP4-201ENST00000389757 ALDH7A1P49419 539 aaKnown RBP10.9□□□□□ -0.66
PKP4-201ENST00000389757 KCTD16Q68DU8 428 aa10.9□□□□□ -0.66
PKP4-201ENST00000389757 ASIC4Q96FT7 647 aa10.9□□□□□ -0.66
PKP4-201ENST00000389757 TBX20Q9UMR3 447 aa10.9□□□□□ -0.66
PKP4-201ENST00000389757 IQANK1A0A1B0GTG1 560 aa10.9□□□□□ -0.66
PKP4-201ENST00000389757 SULT1E1P49888 294 aa10.9□□□□□ -0.66
PKP4-201ENST00000389757 MGAT5BQ3V5L5 792 aa10.9□□□□□ -0.66
PKP4-201ENST00000389757 EXOC4Q96A65 974 aa10.9□□□□□ -0.66
PKP4-201ENST00000389757 CHMP6Q96FZ7 201 aa10.9□□□□□ -0.66
PKP4-201ENST00000389757 CAPS2Q9BXY5 557 aa10.9□□□□□ -0.66
PKP4-201ENST00000389757 DYRK4Q9NR20 520 aa10.9□□□□□ -0.66
PKP4-201ENST00000389757 ABCF3Q9NUQ8 709 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms