RNA–Protein interactions for RNA: ENST00000389138.7

ERCC4-202, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 2,106 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-202ENST00000389138 CLNS1AP54105 237 aaKnown RBP6.32□□□□□ -1.4
ERCC4-202ENST00000389138 CTBSQ01459 385 aa6.32□□□□□ -1.4
ERCC4-202ENST00000389138 NRG1Q02297 640 aaPredicted RBP6.32□□□□□ -1.4
ERCC4-202ENST00000389138 DMTNQ08495 405 aa6.32□□□□□ -1.4
ERCC4-202ENST00000389138 PLCL1Q15111 1095 aa6.32□□□□□ -1.4
ERCC4-202ENST00000389138 SF1Q15637 639 aaKnown RBP6.32□□□□□ -1.4
ERCC4-202ENST00000389138 SMAD2Q15796 467 aaKnown RBP6.32□□□□□ -1.4
ERCC4-202ENST00000389138 NTRK3Q16288 839 aa6.32□□□□□ -1.4
ERCC4-202ENST00000389138 FAM110CQ1W6H9 321 aa6.32□□□□□ -1.4
ERCC4-202ENST00000389138 SPRED3Q2MJR0 410 aa6.32□□□□□ -1.4
ERCC4-202ENST00000389138 HSF5Q4G112 596 aaPredicted RBP6.32□□□□□ -1.4
ERCC4-202ENST00000389138 LBX2Q6XYB7 198 aa6.32□□□□□ -1.4
ERCC4-202ENST00000389138 ARHGAP27Q6ZUM4 889 aa6.32□□□□□ -1.4
ERCC4-202ENST00000389138 CREG2Q8IUH2 290 aa6.32□□□□□ -1.4
ERCC4-202ENST00000389138 CEP97Q8IW35 865 aa6.32□□□□□ -1.4
ERCC4-202ENST00000389138 TBC1D21Q8IYX1 336 aa6.32□□□□□ -1.4
ERCC4-202ENST00000389138 LRRN4CLQ8ND94 238 aa6.32□□□□□ -1.4
ERCC4-202ENST00000389138 BICD2Q8TD16 824 aa6.32□□□□□ -1.4
ERCC4-202ENST00000389138 UTP15Q8TED0 518 aaKnown RBP6.32□□□□□ -1.4
ERCC4-202ENST00000389138 SYTL4Q96C24 671 aaPredicted RBP6.32□□□□□ -1.4
ERCC4-202ENST00000389138 ABHD8Q96I13 439 aa6.32□□□□□ -1.4
ERCC4-202ENST00000389138 MAGEB10Q96LZ2 347 aaPredicted RBP6.32□□□□□ -1.4
ERCC4-202ENST00000389138 NTPCRQ9BSD7 190 aaKnown RBP6.32□□□□□ -1.4
ERCC4-202ENST00000389138 AGXT2Q9BYV1 514 aa6.32□□□□□ -1.4
ERCC4-202ENST00000389138 CNTD2Q9H8S5 307 aa6.32□□□□□ -1.4
ERCC4-202ENST00000389138 ZNF277Q9NRM2 450 aaPredicted RBP6.32□□□□□ -1.4
ERCC4-202ENST00000389138 SLC13A4Q9UKG4 626 aa6.32□□□□□ -1.4
ERCC4-202ENST00000389138 CORINQ9Y5Q5 1042 aa6.32□□□□□ -1.4
ERCC4-202ENST00000389138 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.32□□□□□ -1.4
ERCC4-202ENST00000389138 RHPN2P1A8MT19 583 aa6.32□□□□□ -1.4
ERCC4-202ENST00000389138 PI4K2BG5E9Z4 385 aa6.32□□□□□ -1.4
ERCC4-202ENST00000389138 H3BML4 177 aa6.32□□□□□ -1.4
ERCC4-202ENST00000389138 DLX3O60479 287 aa6.32□□□□□ -1.4
ERCC4-202ENST00000389138 UBXN7O94888 489 aa6.32□□□□□ -1.4
ERCC4-202ENST00000389138 HTR3BO95264 441 aa6.32□□□□□ -1.4
ERCC4-202ENST00000389138 SGPL1O95470 568 aa6.32□□□□□ -1.4
ERCC4-202ENST00000389138 STARD3NLO95772 234 aa6.32□□□□□ -1.4
ERCC4-202ENST00000389138 NME1P15531 152 aaKnown RBP6.32□□□□□ -1.4
ERCC4-202ENST00000389138 HOXD10P28358 340 aa6.32□□□□□ -1.4
ERCC4-202ENST00000389138 RGS19P49795 217 aa6.32□□□□□ -1.4
ERCC4-202ENST00000389138 RGS3P49796 1198 aa6.32□□□□□ -1.4
ERCC4-202ENST00000389138 NLRP5P59047 1200 aa6.32□□□□□ -1.4
ERCC4-202ENST00000389138 IFI35P80217 286 aaPredicted RBP6.32□□□□□ -1.4
ERCC4-202ENST00000389138 INSM1Q01101 510 aaPredicted RBP6.32□□□□□ -1.4
ERCC4-202ENST00000389138 LRRC74AQ0VAA2 488 aa6.32□□□□□ -1.4
ERCC4-202ENST00000389138 ATP2B3Q16720 1220 aa6.32□□□□□ -1.4
ERCC4-202ENST00000389138 INTS3Q68E01 1043 aaKnown RBP6.32□□□□□ -1.4
ERCC4-202ENST00000389138 LIN54Q6MZP7 749 aa6.32□□□□□ -1.4
ERCC4-202ENST00000389138 PGBD2Q6P3X8 592 aa6.32□□□□□ -1.4
ERCC4-202ENST00000389138 NME9Q86XW9 330 aa6.32□□□□□ -1.4
ERCC4-202ENST00000389138 LIX1LQ8IVB5 337 aa6.32□□□□□ -1.4
ERCC4-202ENST00000389138 STK35Q8TDR2 534 aa6.32□□□□□ -1.4
ERCC4-202ENST00000389138 PHKBQ93100 1093 aa6.32□□□□□ -1.4
ERCC4-202ENST00000389138 C18orf8Q96DM3 657 aa6.32□□□□□ -1.4
ERCC4-202ENST00000389138 TMEM41AQ96HV5 264 aa6.32□□□□□ -1.4
ERCC4-202ENST00000389138 MAELQ96JY0 434 aaKnown RBP6.32□□□□□ -1.4
ERCC4-202ENST00000389138 YME1L1Q96TA2 773 aa6.32□□□□□ -1.4
ERCC4-202ENST00000389138 PAIP2Q9BPZ3 127 aaKnown RBP6.32□□□□□ -1.4
ERCC4-202ENST00000389138 TEX13BQ9BXU2 312 aa6.32□□□□□ -1.4
ERCC4-202ENST00000389138 TMEM51Q9NW97 253 aa6.32□□□□□ -1.4
ERCC4-202ENST00000389138 LAMP5Q9UJQ1 280 aa6.32□□□□□ -1.4
ERCC4-202ENST00000389138 GDF2Q9UK05 429 aaPredicted RBP6.32□□□□□ -1.4
ERCC4-202ENST00000389138 COG5Q9UP83 839 aa6.32□□□□□ -1.4
ERCC4-202ENST00000389138 PCDHA9Q9Y5H5 950 aa6.32□□□□□ -1.4
ERCC4-202ENST00000389138 KIF20BQ96Q89 1820 aa6.32□□□□□ -1.4
ERCC4-202ENST00000389138 DICER1Q9UPY3 1922 aaKnown RBP6.31□□□□□ -1.4
ERCC4-202ENST00000389138 DLEC1Q9Y238 1755 aa6.31□□□□□ -1.4
ERCC4-202ENST00000389138 ACKR2O00590 384 aa6.31□□□□□ -1.4
ERCC4-202ENST00000389138 SGTAO43765 313 aa6.31□□□□□ -1.4
ERCC4-202ENST00000389138 KIF1CO43896 1103 aaKnown RBP6.31□□□□□ -1.4
ERCC4-202ENST00000389138 COBLO75128 1261 aa6.31□□□□□ -1.4
ERCC4-202ENST00000389138 ULK1O75385 1050 aa6.31□□□□□ -1.4
ERCC4-202ENST00000389138 GJB3O75712 270 aa6.31□□□□□ -1.4
ERCC4-202ENST00000389138 FGF18O76093 207 aa6.31□□□□□ -1.4
ERCC4-202ENST00000389138 GSNP06396 782 aa6.31□□□□□ -1.4
ERCC4-202ENST00000389138 EPHX1P07099 455 aa6.31□□□□□ -1.4
ERCC4-202ENST00000389138 SELPP16109 830 aa6.31□□□□□ -1.4
ERCC4-202ENST00000389138 ATP2A2P16615 1042 aaKnown RBP6.31□□□□□ -1.4
ERCC4-202ENST00000389138 ITPKAP23677 461 aa6.31□□□□□ -1.4
ERCC4-202ENST00000389138 HNF4AP41235 474 aa6.31□□□□□ -1.4
ERCC4-202ENST00000389138 LSSP48449 732 aa6.31□□□□□ -1.4
ERCC4-202ENST00000389138 EVCP57679 992 aa6.31□□□□□ -1.4
ERCC4-202ENST00000389138 RPL6Q02878 288 aaKnown RBP6.31□□□□□ -1.4
ERCC4-202ENST00000389138 PPARDQ03181 441 aa6.31□□□□□ -1.4
ERCC4-202ENST00000389138 UBXN1Q04323 297 aa6.31□□□□□ -1.4
ERCC4-202ENST00000389138 LRP8Q14114 963 aa6.31□□□□□ -1.4
ERCC4-202ENST00000389138 RASA2Q15283 850 aa6.31□□□□□ -1.4
ERCC4-202ENST00000389138 SF3B3Q15393 1217 aaKnown RBP6.31□□□□□ -1.4
ERCC4-202ENST00000389138 CNN3Q15417 329 aaKnown RBP6.31□□□□□ -1.4
ERCC4-202ENST00000389138 PFKFB4Q16877 469 aa6.31□□□□□ -1.4
ERCC4-202ENST00000389138 KRTCAP3Q53RY4 240 aa6.31□□□□□ -1.4
ERCC4-202ENST00000389138 BROXQ5VW32 411 aa6.31□□□□□ -1.4
ERCC4-202ENST00000389138 SHQ1Q6PI26 577 aaKnown RBP6.31□□□□□ -1.4
ERCC4-202ENST00000389138 CRTC1Q6UUV9 634 aa6.31□□□□□ -1.4
ERCC4-202ENST00000389138 KIF18BQ86Y91 864 aa6.31□□□□□ -1.4
ERCC4-202ENST00000389138 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.31□□□□□ -1.4
ERCC4-202ENST00000389138 PTPRN2Q92932 1015 aa6.31□□□□□ -1.4
ERCC4-202ENST00000389138 CNDP2Q96KP4 475 aaKnown RBP6.31□□□□□ -1.4
ERCC4-202ENST00000389138 ZKSCAN3Q9BRR0 538 aa6.31□□□□□ -1.4
ERCC4-202ENST00000389138 ADAM19Q9H013 955 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms