RNA–Protein interactions for RNA: ENST00000389134.9

CNEP1R1-201, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-201ENST00000389134 MTF2Q9Y483 593 aaPredicted RBP23.78■■□□□ 1.4
CNEP1R1-201ENST00000389134 SF3B1O75533 1304 aaKnown RBP eCLIP23.78■■□□□ 1.4
CNEP1R1-201ENST00000389134 ZMYM2Q9UBW7 1377 aa23.78■■□□□ 1.4
CNEP1R1-201ENST00000389134 CNOT1A5YKK6 2376 aaKnown RBP23.77■■□□□ 1.4
CNEP1R1-201ENST00000389134 CACNA1GO43497 2377 aa23.77■■□□□ 1.4
CNEP1R1-201ENST00000389134 HOXA9P31269 272 aa23.77■■□□□ 1.4
CNEP1R1-201ENST00000389134 YWHABP31946 246 aaKnown RBP23.77■■□□□ 1.4
CNEP1R1-201ENST00000389134 POU5F1BQ06416 359 aa23.77■■□□□ 1.4
CNEP1R1-201ENST00000389134 GRIK3Q13003 919 aa23.77■■□□□ 1.4
CNEP1R1-201ENST00000389134 PPM1LQ5SGD2 360 aa23.77■■□□□ 1.4
CNEP1R1-201ENST00000389134 ZBTB41Q5SVQ8 909 aa23.77■■□□□ 1.4
CNEP1R1-201ENST00000389134 IFNLR1Q8IU57 520 aaPredicted RBP23.77■■□□□ 1.4
CNEP1R1-201ENST00000389134 JAKMIP1Q96N16 626 aaKnown RBP23.77■■□□□ 1.4
CNEP1R1-201ENST00000389134 NELL2Q99435 816 aa23.77■■□□□ 1.4
CNEP1R1-201ENST00000389134 EPC1Q9H2F5 836 aa23.77■■□□□ 1.4
CNEP1R1-201ENST00000389134 COL4A3Q01955 1670 aa23.76■■□□□ 1.39
CNEP1R1-201ENST00000389134 INO80B-WBP1J3KQ70 363 aa23.76■■□□□ 1.39
CNEP1R1-201ENST00000389134 NCAM2O15394 837 aa23.76■■□□□ 1.39
CNEP1R1-201ENST00000389134 SLC37A4O43826 429 aa23.76■■□□□ 1.39
CNEP1R1-201ENST00000389134 XYLBO75191 536 aa23.76■■□□□ 1.39
CNEP1R1-201ENST00000389134 NTHL1P78549 312 aa23.76■■□□□ 1.39
CNEP1R1-201ENST00000389134 TFDP1Q14186 410 aa23.76■■□□□ 1.39
CNEP1R1-201ENST00000389134 GALNT17Q6IS24 598 aa23.76■■□□□ 1.39
CNEP1R1-201ENST00000389134 PRSS55Q6UWB4 352 aaPredicted RBP23.76■■□□□ 1.39
CNEP1R1-201ENST00000389134 FAM177A1Q8N128 213 aaPredicted RBP23.76■■□□□ 1.39
CNEP1R1-201ENST00000389134 DAGLBQ8NCG7 672 aa23.76■■□□□ 1.39
CNEP1R1-201ENST00000389134 NELL1Q92832 810 aa23.76■■□□□ 1.39
CNEP1R1-201ENST00000389134 KCNB2Q92953 911 aa23.76■■□□□ 1.39
CNEP1R1-201ENST00000389134 LXNQ9BS40 222 aa23.76■■□□□ 1.39
CNEP1R1-201ENST00000389134 NXF3Q9H4D5 531 aaKnown RBP23.76■■□□□ 1.39
CNEP1R1-201ENST00000389134 SMG5Q9UPR3 1016 aaKnown RBP23.76■■□□□ 1.39
CNEP1R1-201ENST00000389134 TRIP11Q15643 1979 aa23.75■■□□□ 1.39
CNEP1R1-201ENST00000389134 LILRB5O75023 590 aa23.75■■□□□ 1.39
CNEP1R1-201ENST00000389134 AKAP5P24588 427 aa23.75■■□□□ 1.39
CNEP1R1-201ENST00000389134 CCT2P78371 535 aaKnown RBP23.75■■□□□ 1.39
CNEP1R1-201ENST00000389134 SSRP1Q08945 709 aaKnown RBP23.75■■□□□ 1.39
CNEP1R1-201ENST00000389134 EPHA7Q15375 998 aa23.75■■□□□ 1.39
CNEP1R1-201ENST00000389134 XKR9Q5GH70 373 aa23.75■■□□□ 1.39
CNEP1R1-201ENST00000389134 RTP2Q5QGT7 225 aa23.75■■□□□ 1.39
CNEP1R1-201ENST00000389134 CLDN23Q96B33 292 aa23.75■■□□□ 1.39
CNEP1R1-201ENST00000389134 CLSTN3Q9BQT9 956 aa23.75■■□□□ 1.39
CNEP1R1-201ENST00000389134 RTKNQ9BST9 563 aa23.75■■□□□ 1.39
CNEP1R1-201ENST00000389134 TTPALQ9BTX7 342 aa23.75■■□□□ 1.39
CNEP1R1-201ENST00000389134 PHF20Q9BVI0 1012 aa23.75■■□□□ 1.39
CNEP1R1-201ENST00000389134 NCOA5Q9HCD5 579 aaKnown RBP23.75■■□□□ 1.39
CNEP1R1-201ENST00000389134 KCNMB3Q9NPA1 279 aa23.75■■□□□ 1.39
CNEP1R1-201ENST00000389134 TBC1D4O60343 1298 aa23.74■■□□□ 1.39
CNEP1R1-201ENST00000389134 C8AP07357 584 aa23.74■■□□□ 1.39
CNEP1R1-201ENST00000389134 ARF4P18085 180 aaPredicted RBP23.74■■□□□ 1.39
CNEP1R1-201ENST00000389134 PDIA3P30101 505 aaKnown RBP23.74■■□□□ 1.39
CNEP1R1-201ENST00000389134 HSP90AA2PQ14568 343 aaPredicted RBP23.74■■□□□ 1.39
CNEP1R1-201ENST00000389134 INF2Q27J81 1249 aa23.74■■□□□ 1.39
CNEP1R1-201ENST00000389134 KRT25Q7Z3Z0 450 aa23.74■■□□□ 1.39
CNEP1R1-201ENST00000389134 PIK3R5Q8WYR1 880 aa23.74■■□□□ 1.39
CNEP1R1-201ENST00000389134 RABGGTAQ92696 567 aa23.74■■□□□ 1.39
CNEP1R1-201ENST00000389134 ZSWIM4Q9H7M6 989 aa23.74■■□□□ 1.39
CNEP1R1-201ENST00000389134 POLIQ9UNA4 740 aa23.74■■□□□ 1.39
CNEP1R1-201ENST00000389134 CCL16O15467 120 aa23.73■■□□□ 1.39
CNEP1R1-201ENST00000389134 POU2F2P09086 479 aa23.73■■□□□ 1.39
CNEP1R1-201ENST00000389134 RPS6KB1P23443 525 aa23.73■■□□□ 1.39
CNEP1R1-201ENST00000389134 RPS9P46781 194 aaKnown RBP23.73■■□□□ 1.39
CNEP1R1-201ENST00000389134 EVCP57679 992 aa23.73■■□□□ 1.39
CNEP1R1-201ENST00000389134 MBTD1Q05BQ5 628 aa23.73■■□□□ 1.39
CNEP1R1-201ENST00000389134 PSMD5Q16401 504 aa23.73■■□□□ 1.39
CNEP1R1-201ENST00000389134 AMHR2Q16671 573 aa23.73■■□□□ 1.39
CNEP1R1-201ENST00000389134 SLC27A1Q6PCB7 646 aa23.73■■□□□ 1.39
CNEP1R1-201ENST00000389134 ITFG1Q8TB96 612 aa23.73■■□□□ 1.39
CNEP1R1-201ENST00000389134 FAM126AQ9BYI3 521 aaPredicted RBP23.73■■□□□ 1.39
CNEP1R1-201ENST00000389134 KCNH3Q9ULD8 1083 aa23.73■■□□□ 1.39
CNEP1R1-201ENST00000389134 DEXIO95424 95 aa23.72■■□□□ 1.39
CNEP1R1-201ENST00000389134 GCFC2P16383 781 aaKnown RBP23.72■■□□□ 1.39
CNEP1R1-201ENST00000389134 CD72P21854 359 aa23.72■■□□□ 1.39
CNEP1R1-201ENST00000389134 TUSC3Q13454 348 aa23.72■■□□□ 1.39
CNEP1R1-201ENST00000389134 NPY5RQ15761 445 aa23.72■■□□□ 1.39
CNEP1R1-201ENST00000389134 UVSSAQ2YD98 709 aa23.72■■□□□ 1.39
CNEP1R1-201ENST00000389134 FAM171A1Q5VUB5 890 aa23.72■■□□□ 1.39
CNEP1R1-201ENST00000389134 PPP4R3AQ6IN85 833 aa23.72■■□□□ 1.39
CNEP1R1-201ENST00000389134 PDXDC1Q6P996 788 aa23.72■■□□□ 1.39
CNEP1R1-201ENST00000389134 LNX1Q8TBB1 728 aaPredicted RBP23.72■■□□□ 1.39
CNEP1R1-201ENST00000389134 KXD1Q9BQD3 176 aa23.72■■□□□ 1.39
CNEP1R1-201ENST00000389134 NFKBIZQ9BYH8 718 aa23.72■■□□□ 1.39
CNEP1R1-201ENST00000389134 XPNPEP1Q9NQW7 623 aa23.72■■□□□ 1.39
CNEP1R1-201ENST00000389134 RGL1Q9NZL6 768 aa23.72■■□□□ 1.39
CNEP1R1-201ENST00000389134 KLK14Q9P0G3 267 aa23.72■■□□□ 1.39
CNEP1R1-201ENST00000389134 PARP2Q9UGN5 583 aa23.72■■□□□ 1.39
CNEP1R1-201ENST00000389134 USP18Q9UMW8 372 aa23.72■■□□□ 1.39
CNEP1R1-201ENST00000389134 MRPS17Q9Y2R5 130 aaKnown RBP23.72■■□□□ 1.39
CNEP1R1-201ENST00000389134 CFAP47Q6ZTR5 3102 aa23.71■■□□□ 1.39
CNEP1R1-201ENST00000389134 TBX3O15119 743 aa23.71■■□□□ 1.39
CNEP1R1-201ENST00000389134 NPTXRO95502 500 aa23.71■■□□□ 1.39
CNEP1R1-201ENST00000389134 TARSP26639 723 aaKnown RBP23.71■■□□□ 1.39
CNEP1R1-201ENST00000389134 ZNF852Q6ZMS4 543 aa23.71■■□□□ 1.39
CNEP1R1-201ENST00000389134 TPRG1Q6ZUI0 275 aa23.71■■□□□ 1.39
CNEP1R1-201ENST00000389134 RTL10Q7L3V2 364 aa23.71■■□□□ 1.39
CNEP1R1-201ENST00000389134 CEP57Q86XR8 500 aa23.71■■□□□ 1.39
CNEP1R1-201ENST00000389134 YTHDC1Q96MU7 727 aaKnown RBP23.71■■□□□ 1.39
CNEP1R1-201ENST00000389134 PRMT8Q9NR22 394 aaPredicted RBP23.71■■□□□ 1.39
CNEP1R1-201ENST00000389134 GMEB2Q9UKD1 530 aa23.71■■□□□ 1.39
CNEP1R1-201ENST00000389134 SNX14Q9Y5W7 946 aa23.71■■□□□ 1.39
CNEP1R1-201ENST00000389134 CHD6Q8TD26 2715 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms