RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 ENO4A6NNW6 628 aa8.76□□□□□ -1.01
PTPRR-203ENST00000378778 A8MXQ7 604 aa8.76□□□□□ -1.01
PTPRR-203ENST00000378778 MPHOSPH10O00566 681 aaKnown RBP8.76□□□□□ -1.01
PTPRR-203ENST00000378778 NVLO15381 856 aaKnown RBP8.76□□□□□ -1.01
PTPRR-203ENST00000378778 THAP12O43422 761 aa8.76□□□□□ -1.01
PTPRR-203ENST00000378778 ASMTLO95671 621 aa8.76□□□□□ -1.01
PTPRR-203ENST00000378778 MAPTP10636 758 aaKnown RBP8.76□□□□□ -1.01
PTPRR-203ENST00000378778 CIITAP33076 1130 aa8.76□□□□□ -1.01
PTPRR-203ENST00000378778 ENPEPQ07075 957 aa8.76□□□□□ -1.01
PTPRR-203ENST00000378778 FYB2Q5VWT5 728 aa8.76□□□□□ -1.01
PTPRR-203ENST00000378778 SMYD5Q6GMV2 418 aa8.76□□□□□ -1.01
PTPRR-203ENST00000378778 CGB2Q6NT52 195 aa8.76□□□□□ -1.01
PTPRR-203ENST00000378778 PPP1R2P3Q6NXS1 205 aa8.76□□□□□ -1.01
PTPRR-203ENST00000378778 ZNF804AQ7Z570 1209 aa8.76□□□□□ -1.01
PTPRR-203ENST00000378778 C12orf56Q8IXR9 622 aa8.76□□□□□ -1.01
PTPRR-203ENST00000378778 CCDC89Q8N998 374 aa8.76□□□□□ -1.01
PTPRR-203ENST00000378778 PPFIBP2Q8ND30 876 aa8.76□□□□□ -1.01
PTPRR-203ENST00000378778 ATL2Q8NHH9 583 aa8.76□□□□□ -1.01
PTPRR-203ENST00000378778 TGFBRAP1Q8WUH2 860 aa8.76□□□□□ -1.01
PTPRR-203ENST00000378778 DDX17Q92841 729 aaKnown RBP8.76□□□□□ -1.01
PTPRR-203ENST00000378778 ITFG2Q969R8 447 aa8.76□□□□□ -1.01
PTPRR-203ENST00000378778 FAM136AQ96C01 138 aa8.76□□□□□ -1.01
PTPRR-203ENST00000378778 CEP95Q96GE4 821 aa8.76□□□□□ -1.01
PTPRR-203ENST00000378778 ZNF333Q96JL9 665 aa8.76□□□□□ -1.01
PTPRR-203ENST00000378778 RMDN2Q96LZ7 410 aa8.76□□□□□ -1.01
PTPRR-203ENST00000378778 RTFDC1Q9BY42 306 aaPredicted RBP8.76□□□□□ -1.01
PTPRR-203ENST00000378778 MYLK2Q9H1R3 596 aa8.76□□□□□ -1.01
PTPRR-203ENST00000378778 JMJD4Q9H9V9 463 aa8.76□□□□□ -1.01
PTPRR-203ENST00000378778 AAASQ9NRG9 546 aa8.76□□□□□ -1.01
PTPRR-203ENST00000378778 AJAP1Q9UKB5 411 aaPredicted RBP8.76□□□□□ -1.01
PTPRR-203ENST00000378778 PNMA3Q9UL41 463 aa8.76□□□□□ -1.01
PTPRR-203ENST00000378778 COG5Q9UP83 839 aa8.76□□□□□ -1.01
PTPRR-203ENST00000378778 SLX4Q8IY92 1834 aa8.76□□□□□ -1.01
PTPRR-203ENST00000378778 MYH14Q7Z406 1995 aaKnown RBP8.76□□□□□ -1.01
PTPRR-203ENST00000378778 CCDC22O60826 627 aa8.76□□□□□ -1.01
PTPRR-203ENST00000378778 EDF1O60869 148 aaKnown RBP8.76□□□□□ -1.01
PTPRR-203ENST00000378778 MED24O75448 989 aa8.76□□□□□ -1.01
PTPRR-203ENST00000378778 SKAP2O75563 359 aaPredicted RBP8.76□□□□□ -1.01
PTPRR-203ENST00000378778 ATF2P15336 505 aa8.76□□□□□ -1.01
PTPRR-203ENST00000378778 COMTP21964 271 aa8.76□□□□□ -1.01
PTPRR-203ENST00000378778 PEX19P40855 299 aa8.76□□□□□ -1.01
PTPRR-203ENST00000378778 SPIRE1Q08AE8 756 aa8.76□□□□□ -1.01
PTPRR-203ENST00000378778 LONRF1Q17RB8 773 aa8.76□□□□□ -1.01
PTPRR-203ENST00000378778 GRIPAP1Q4V328 841 aa8.76□□□□□ -1.01
PTPRR-203ENST00000378778 KIRREL3Q8IZU9 778 aa8.76□□□□□ -1.01
PTPRR-203ENST00000378778 KIF2BQ8N4N8 673 aa8.76□□□□□ -1.01
PTPRR-203ENST00000378778 CNBD1Q8NA66 436 aa8.76□□□□□ -1.01
PTPRR-203ENST00000378778 ETNPPLQ8TBG4 499 aa8.76□□□□□ -1.01
PTPRR-203ENST00000378778 RNF217Q8TC41 542 aa8.76□□□□□ -1.01
PTPRR-203ENST00000378778 DENND1AQ8TEH3 1009 aa8.76□□□□□ -1.01
PTPRR-203ENST00000378778 CRYGNQ8WXF5 182 aa8.76□□□□□ -1.01
PTPRR-203ENST00000378778 COA7Q96BR5 231 aa8.76□□□□□ -1.01
PTPRR-203ENST00000378778 TRIM11Q96F44 468 aa8.76□□□□□ -1.01
PTPRR-203ENST00000378778 IFT43Q96FT9 208 aa8.76□□□□□ -1.01
PTPRR-203ENST00000378778 NLRP3Q96P20 1036 aa8.76□□□□□ -1.01
PTPRR-203ENST00000378778 VCX3BQ9H321 246 aa8.76□□□□□ -1.01
PTPRR-203ENST00000378778 VCX3AQ9NNX9 186 aa8.76□□□□□ -1.01
PTPRR-203ENST00000378778 ZNF212Q9UDV6 495 aa8.76□□□□□ -1.01
PTPRR-203ENST00000378778 SLC24A2Q9UI40 661 aa8.76□□□□□ -1.01
PTPRR-203ENST00000378778 PCDHB13Q9Y5F0 798 aa8.76□□□□□ -1.01
PTPRR-203ENST00000378778 TGFB1I1O43294 461 aa8.75□□□□□ -1.01
PTPRR-203ENST00000378778 IL1BP01584 269 aa8.75□□□□□ -1.01
PTPRR-203ENST00000378778 FTLP02792 175 aaPredicted RBP8.75□□□□□ -1.01
PTPRR-203ENST00000378778 GNAT1P11488 350 aa8.75□□□□□ -1.01
PTPRR-203ENST00000378778 SP100P23497 879 aaPredicted RBP8.75□□□□□ -1.01
PTPRR-203ENST00000378778 SLCO1A2P46721 670 aa8.75□□□□□ -1.01
PTPRR-203ENST00000378778 RPL26P61254 145 aaKnown RBP8.75□□□□□ -1.01
PTPRR-203ENST00000378778 KRT17Q04695 432 aa8.75□□□□□ -1.01
PTPRR-203ENST00000378778 MGAT5Q09328 741 aa8.75□□□□□ -1.01
PTPRR-203ENST00000378778 ZNF211Q13398 564 aaPredicted RBP8.75□□□□□ -1.01
PTPRR-203ENST00000378778 CUL3Q13618 768 aa8.75□□□□□ -1.01
PTPRR-203ENST00000378778 MUM1Q2TAK8 710 aa8.75□□□□□ -1.01
PTPRR-203ENST00000378778 ERFEQ4G0M1 354 aa8.75□□□□□ -1.01
PTPRR-203ENST00000378778 DAB2IPQ5VWQ8 1189 aa8.75□□□□□ -1.01
PTPRR-203ENST00000378778 ANKS1BQ7Z6G8 1248 aa8.75□□□□□ -1.01
PTPRR-203ENST00000378778 LONP2Q86WA8 852 aa8.75□□□□□ -1.01
PTPRR-203ENST00000378778 CATSPER3Q86XQ3 398 aa8.75□□□□□ -1.01
PTPRR-203ENST00000378778 PROCA1Q8NCQ7 364 aaPredicted RBP8.75□□□□□ -1.01
PTPRR-203ENST00000378778 LRRC8CQ8TDW0 803 aa8.75□□□□□ -1.01
PTPRR-203ENST00000378778 TBC1D10AQ9BXI6 508 aa8.75□□□□□ -1.01
PTPRR-203ENST00000378778 TRIM4Q9C037 500 aa8.75□□□□□ -1.01
PTPRR-203ENST00000378778 DNAJC18Q9H819 358 aa8.75□□□□□ -1.01
PTPRR-203ENST00000378778 VAT1LQ9HCJ6 419 aa8.75□□□□□ -1.01
PTPRR-203ENST00000378778 NINJ2Q9NZG7 142 aa8.75□□□□□ -1.01
PTPRR-203ENST00000378778 ANAPC5Q9UJX4 755 aa8.75□□□□□ -1.01
PTPRR-203ENST00000378778 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.75□□□□□ -1.01
PTPRR-203ENST00000378778 RTCBQ9Y3I0 505 aaKnown RBP8.75□□□□□ -1.01
PTPRR-203ENST00000378778 EME2A4GXA9 379 aaPredicted RBP8.75□□□□□ -1.01
PTPRR-203ENST00000378778 DNAJC6O75061 913 aa8.75□□□□□ -1.01
PTPRR-203ENST00000378778 GCNT3O95395 438 aa8.75□□□□□ -1.01
PTPRR-203ENST00000378778 TROVE2P10155 538 aaKnown RBP eCLIP8.75□□□□□ -1.01
PTPRR-203ENST00000378778 MYBL1P10243 752 aa8.75□□□□□ -1.01
PTPRR-203ENST00000378778 ABCB4P21439 1286 aa8.75□□□□□ -1.01
PTPRR-203ENST00000378778 IVDP26440 423 aa8.75□□□□□ -1.01
PTPRR-203ENST00000378778 PSMC4P43686 418 aa8.75□□□□□ -1.01
PTPRR-203ENST00000378778 PTDSS1P48651 473 aaKnown RBP8.75□□□□□ -1.01
PTPRR-203ENST00000378778 CASP5P51878 434 aa8.75□□□□□ -1.01
PTPRR-203ENST00000378778 SGO2Q562F6 1265 aa8.75□□□□□ -1.01
PTPRR-203ENST00000378778 ANKRD42Q8N9B4 389 aa8.75□□□□□ -1.01
PTPRR-203ENST00000378778 PARD3BQ8TEW8 1205 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms