RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 OLFML3Q9NRN5 406 aa10.76□□□□□ -0.69
PTCH1-204ENST00000375290 GRK2P25098 689 aa10.76□□□□□ -0.69
PTCH1-204ENST00000375290 CTCFP49711 727 aaPredicted RBP10.76□□□□□ -0.69
PTCH1-204ENST00000375290 RUNX1T1Q06455 604 aa10.76□□□□□ -0.69
PTCH1-204ENST00000375290 TTC39BQ5VTQ0 682 aaPredicted RBP10.76□□□□□ -0.69
PTCH1-204ENST00000375290 IZUMO3Q5VZ72 239 aa10.76□□□□□ -0.69
PTCH1-204ENST00000375290 FBXW10Q5XX13 1052 aa10.76□□□□□ -0.69
PTCH1-204ENST00000375290 PPP2R3CQ969Q6 453 aa10.76□□□□□ -0.69
PTCH1-204ENST00000375290 DDX47Q9H0S4 455 aaKnown RBP10.76□□□□□ -0.69
PTCH1-204ENST00000375290 GYPCP04921 128 aa10.76□□□□□ -0.69
PTCH1-204ENST00000375290 IRGCQ6NXR0 463 aa10.76□□□□□ -0.69
PTCH1-204ENST00000375290 WDR60Q8WVS4 1066 aa10.76□□□□□ -0.69
PTCH1-204ENST00000375290 C19orf60Q96EN9 201 aa10.76□□□□□ -0.69
PTCH1-204ENST00000375290 OVOS2A0A0J9YW53 1432 aa10.76□□□□□ -0.69
PTCH1-204ENST00000375290 OVOS2Q6IE36 1432 aa10.76□□□□□ -0.69
PTCH1-204ENST00000375290 GZMAP12544 262 aa10.75□□□□□ -0.69
PTCH1-204ENST00000375290 MAPK7Q13164 816 aa10.75□□□□□ -0.69
PTCH1-204ENST00000375290 ATP6V1E2Q96A05 226 aa10.75□□□□□ -0.69
PTCH1-204ENST00000375290 SLC38A10Q9HBR0 1119 aa10.75□□□□□ -0.69
PTCH1-204ENST00000375290 RGL1Q9NZL6 768 aa10.75□□□□□ -0.69
PTCH1-204ENST00000375290 TBKBP1A7MCY6 615 aa10.75□□□□□ -0.69
PTCH1-204ENST00000375290 H7C0S8 307 aa10.75□□□□□ -0.69
PTCH1-204ENST00000375290 COPB2P35606 906 aa10.75□□□□□ -0.69
PTCH1-204ENST00000375290 RAP1GDS1P52306 607 aa10.75□□□□□ -0.69
PTCH1-204ENST00000375290 MYBPC2Q14324 1141 aa10.75□□□□□ -0.69
PTCH1-204ENST00000375290 CYTH1Q15438 398 aa10.75□□□□□ -0.69
PTCH1-204ENST00000375290 ERP27Q96DN0 273 aa10.75□□□□□ -0.69
PTCH1-204ENST00000375290 PUS7LQ9H0K6 701 aaKnown RBP10.75□□□□□ -0.69
PTCH1-204ENST00000375290 PI4KBQ9UBF8 816 aa10.75□□□□□ -0.69
PTCH1-204ENST00000375290 SLC9A2Q9UBY0 812 aa10.75□□□□□ -0.69
PTCH1-204ENST00000375290 TNFAIP8O95379 198 aa10.75□□□□□ -0.69
PTCH1-204ENST00000375290 MYCLP12524 364 aaPredicted RBP10.75□□□□□ -0.69
PTCH1-204ENST00000375290 PLA2G4AP47712 749 aa10.75□□□□□ -0.69
PTCH1-204ENST00000375290 HK2P52789 917 aa10.75□□□□□ -0.69
PTCH1-204ENST00000375290 HDLBPQ00341 1268 aaKnown RBP10.75□□□□□ -0.69
PTCH1-204ENST00000375290 TMEM120BA0PK00 339 aa10.75□□□□□ -0.69
PTCH1-204ENST00000375290 MYL4P12829 197 aa10.75□□□□□ -0.69
PTCH1-204ENST00000375290 OSBPP22059 807 aa10.75□□□□□ -0.69
PTCH1-204ENST00000375290 KRT17Q04695 432 aa10.75□□□□□ -0.69
PTCH1-204ENST00000375290 MRPL28Q13084 256 aaKnown RBP10.75□□□□□ -0.69
PTCH1-204ENST00000375290 SNTNA6NMZ2 147 aa10.75□□□□□ -0.69
PTCH1-204ENST00000375290 ZC3H11AO75152 810 aaKnown RBP eCLIP10.75□□□□□ -0.69
PTCH1-204ENST00000375290 TKTP29401 623 aaKnown RBP10.75□□□□□ -0.69
PTCH1-204ENST00000375290 CSTF3Q12996 717 aaKnown RBP10.75□□□□□ -0.69
PTCH1-204ENST00000375290 KIF19Q2TAC6 998 aa10.75□□□□□ -0.69
PTCH1-204ENST00000375290 LRRC31Q6UY01 552 aa10.75□□□□□ -0.69
PTCH1-204ENST00000375290 TMEM179Q6ZVK1 233 aa10.75□□□□□ -0.69
PTCH1-204ENST00000375290 ADAT2Q7Z6V5 191 aaKnown RBP10.75□□□□□ -0.69
PTCH1-204ENST00000375290 SDR42E1Q8WUS8 393 aa10.75□□□□□ -0.69
PTCH1-204ENST00000375290 BMP3P12645 472 aa10.75□□□□□ -0.69
PTCH1-204ENST00000375290 FLOT2Q14254 428 aa10.75□□□□□ -0.69
PTCH1-204ENST00000375290 MLXIPQ9HAP2 919 aa10.75□□□□□ -0.69
PTCH1-204ENST00000375290 SOX13Q9UN79 622 aa10.75□□□□□ -0.69
PTCH1-204ENST00000375290 GEMIN4P57678 1058 aaKnown RBP10.75□□□□□ -0.69
PTCH1-204ENST00000375290 LAMC2Q13753 1193 aa10.75□□□□□ -0.69
PTCH1-204ENST00000375290 C11orf63Q6NUN7 778 aa10.75□□□□□ -0.69
PTCH1-204ENST00000375290 SLC24A3Q9HC58 644 aa10.75□□□□□ -0.69
PTCH1-204ENST00000375290 ERBB3P21860 1342 aa10.75□□□□□ -0.69
PTCH1-204ENST00000375290 MYO3BQ8WXR4 1341 aa10.75□□□□□ -0.69
PTCH1-204ENST00000375290 TRIM66O15016 1216 aa10.75□□□□□ -0.69
PTCH1-204ENST00000375290 BTDP43251 543 aa10.75□□□□□ -0.69
PTCH1-204ENST00000375290 FUCA2Q9BTY2 467 aa10.75□□□□□ -0.69
PTCH1-204ENST00000375290 INO80BQ9C086 356 aaPredicted RBP10.75□□□□□ -0.69
PTCH1-204ENST00000375290 TOPORSQ9NS56 1045 aaPredicted RBP10.75□□□□□ -0.69
PTCH1-204ENST00000375290 COMMD3-BMI1R4GMX3 469 aa10.75□□□□□ -0.69
PTCH1-204ENST00000375290 SRGAP2O75044 1071 aa10.74□□□□□ -0.69
PTCH1-204ENST00000375290 SOX6P35712 828 aa10.74□□□□□ -0.69
PTCH1-204ENST00000375290 PDIA2Q13087 525 aaKnown RBP10.74□□□□□ -0.69
PTCH1-204ENST00000375290 AGPAT1Q99943 283 aa10.74□□□□□ -0.69
PTCH1-204ENST00000375290 STN1Q9H668 368 aaKnown RBP10.74□□□□□ -0.69
PTCH1-204ENST00000375290 ATAD3AQ9NVI7 634 aa10.74□□□□□ -0.69
PTCH1-204ENST00000375290 STMN3Q9NZ72 180 aa10.74□□□□□ -0.69
PTCH1-204ENST00000375290 ATP11BQ9Y2G3 1177 aa10.74□□□□□ -0.69
PTCH1-204ENST00000375290 PNMA8CA0A1B0GUJ8 204 aa10.74□□□□□ -0.69
PTCH1-204ENST00000375290 SMIM31A0A1B0GVY4 71 aa10.74□□□□□ -0.69
PTCH1-204ENST00000375290 POTECB2RU33 542 aa10.74□□□□□ -0.69
PTCH1-204ENST00000375290 REXO1L1PQ8IX06 675 aa10.74□□□□□ -0.69
PTCH1-204ENST00000375290 ZWILCHQ9H900 591 aa10.74□□□□□ -0.69
PTCH1-204ENST00000375290 LRRIQ4A6NIV6 560 aa10.74□□□□□ -0.69
PTCH1-204ENST00000375290 PMLP29590 882 aa10.74□□□□□ -0.69
PTCH1-204ENST00000375290 MCL1Q07820 350 aa10.74□□□□□ -0.69
PTCH1-204ENST00000375290 KRT27Q7Z3Y8 459 aa10.74□□□□□ -0.69
PTCH1-204ENST00000375290 MREGQ8N565 214 aa10.74□□□□□ -0.69
PTCH1-204ENST00000375290 MANSC1Q9H8J5 431 aa10.74□□□□□ -0.69
PTCH1-204ENST00000375290 TMBIM4Q9HC24 238 aa10.74□□□□□ -0.69
PTCH1-204ENST00000375290 KIF17Q9P2E2 1029 aa10.74□□□□□ -0.69
PTCH1-204ENST00000375290 AP3M1Q9Y2T2 418 aa10.74□□□□□ -0.69
PTCH1-204ENST00000375290 ANP32DO95626 131 aa10.74□□□□□ -0.69
PTCH1-204ENST00000375290 TUBGCP3Q96CW5 907 aa10.74□□□□□ -0.69
PTCH1-204ENST00000375290 ZIM3Q96PE6 472 aa10.74□□□□□ -0.69
PTCH1-204ENST00000375290 OLFM1Q99784 485 aa10.74□□□□□ -0.69
PTCH1-204ENST00000375290 PHF20Q9BVI0 1012 aa10.74□□□□□ -0.69
PTCH1-204ENST00000375290 RSAD1Q9HA92 442 aa10.74□□□□□ -0.69
PTCH1-204ENST00000375290 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.74□□□□□ -0.693e-7■■■■■ 56.2
PTCH1-204ENST00000375290 GDAQ9Y2T3 454 aa10.74□□□□□ -0.69
PTCH1-204ENST00000375290 NCKAP5LQ9HCH0 1330 aa10.74□□□□□ -0.69
PTCH1-204ENST00000375290 SDC4P31431 198 aa10.74□□□□□ -0.69
PTCH1-204ENST00000375290 VAMP7P51809 220 aa10.74□□□□□ -0.69
PTCH1-204ENST00000375290 PRELPP51888 382 aa10.74□□□□□ -0.69
PTCH1-204ENST00000375290 ZNF667Q5HYK9 610 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms