RNA–Protein interactions for RNA: ENST00000375271.4

PTCH1-202, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-202ENST00000375271 BORCS6Q96GS4 357 aa15.66■□□□□ 0.1
PTCH1-202ENST00000375271 AIFM3Q96NN9 605 aa15.66■□□□□ 0.1
PTCH1-202ENST00000375271 WRAP73Q9P2S5 460 aaPredicted RBP15.66■□□□□ 0.1
PTCH1-202ENST00000375271 ZMYM2Q9UBW7 1377 aa15.65■□□□□ 0.1
PTCH1-202ENST00000375271 MIA3Q5JRA6 1907 aa15.65■□□□□ 0.1
PTCH1-202ENST00000375271 ANHXE9PGG2 379 aa15.65■□□□□ 0.1
PTCH1-202ENST00000375271 SPTLC1O15269 473 aa15.65■□□□□ 0.1
PTCH1-202ENST00000375271 NCAM2O15394 837 aa15.65■□□□□ 0.1
PTCH1-202ENST00000375271 C8AP07357 584 aa15.65■□□□□ 0.1
PTCH1-202ENST00000375271 SDHBP21912 280 aa15.65■□□□□ 0.1
PTCH1-202ENST00000375271 MAGEA9P43362 315 aa15.65■□□□□ 0.1
PTCH1-202ENST00000375271 PRKCQQ04759 706 aa15.65■□□□□ 0.1
PTCH1-202ENST00000375271 POU5F1BQ06416 359 aa15.65■□□□□ 0.1
PTCH1-202ENST00000375271 TUSC3Q13454 348 aa15.65■□□□□ 0.1
PTCH1-202ENST00000375271 SNW1Q13573 536 aaKnown RBP15.65■□□□□ 0.1
PTCH1-202ENST00000375271 CAPSQ13938 189 aa15.65■□□□□ 0.1
PTCH1-202ENST00000375271 MLF2Q15773 248 aaPredicted RBP15.65■□□□□ 0.1
PTCH1-202ENST00000375271 FAM171A1Q5VUB5 890 aa15.65■□□□□ 0.1
PTCH1-202ENST00000375271 PRSS55Q6UWB4 352 aaPredicted RBP15.65■□□□□ 0.1
PTCH1-202ENST00000375271 RABGGTAQ92696 567 aa15.65■□□□□ 0.1
PTCH1-202ENST00000375271 ADPGKQ9BRR6 497 aa15.65■□□□□ 0.1
PTCH1-202ENST00000375271 PHF20Q9BVI0 1012 aa15.65■□□□□ 0.1
PTCH1-202ENST00000375271 POLR3FQ9H1D9 316 aaPredicted RBP15.65■□□□□ 0.1
PTCH1-202ENST00000375271 MIOSQ9NXC5 875 aa15.65■□□□□ 0.1
PTCH1-202ENST00000375271 FBXW11Q9UKB1 542 aa15.65■□□□□ 0.1
PTCH1-202ENST00000375271 DCHS1Q96JQ0 3298 aa15.65■□□□□ 0.1
PTCH1-202ENST00000375271 DOCK8Q8NF50 2099 aa15.64■□□□□ 0.09
PTCH1-202ENST00000375271 KANSL1LA0AUZ9 987 aa15.64■□□□□ 0.09
PTCH1-202ENST00000375271 CASTOR2A6NHX0 329 aa15.64■□□□□ 0.09
PTCH1-202ENST00000375271 CCL16O15467 120 aa15.64■□□□□ 0.09
PTCH1-202ENST00000375271 USO1O60763 962 aaKnown RBP15.64■□□□□ 0.09
PTCH1-202ENST00000375271 STARD6P59095 220 aa15.64■□□□□ 0.09
PTCH1-202ENST00000375271 GPC5P78333 572 aa15.64■□□□□ 0.09
PTCH1-202ENST00000375271 TOB2Q14106 344 aaPredicted RBP15.64■□□□□ 0.09
PTCH1-202ENST00000375271 CALCRLQ16602 461 aa15.64■□□□□ 0.09
PTCH1-202ENST00000375271 CDR2LQ86X02 465 aaPredicted RBP15.64■□□□□ 0.09
PTCH1-202ENST00000375271 GPR161Q8N6U8 529 aaKnown RBP15.64■□□□□ 0.09
PTCH1-202ENST00000375271 EIF2AK1Q9BQI3 630 aaKnown RBP15.64■□□□□ 0.09
PTCH1-202ENST00000375271 LARP6Q9BRS8 491 aaKnown RBP15.64■□□□□ 0.09
PTCH1-202ENST00000375271 ANKEF1Q9NU02 776 aa15.64■□□□□ 0.09
PTCH1-202ENST00000375271 PRMT7Q9NVM4 692 aaPredicted RBP15.64■□□□□ 0.09
PTCH1-202ENST00000375271 PCDHA12Q9UN75 941 aa15.64■□□□□ 0.09
PTCH1-202ENST00000375271 EP300Q09472 2414 aaPredicted RBP15.63■□□□□ 0.09
PTCH1-202ENST00000375271 MED19A0JLT2 244 aaPredicted RBP15.63■□□□□ 0.09
PTCH1-202ENST00000375271 N4BP3O15049 544 aa15.63■□□□□ 0.09
PTCH1-202ENST00000375271 ZBTB39O15060 712 aa15.63■□□□□ 0.09
PTCH1-202ENST00000375271 B4GALT5O43286 388 aa15.63■□□□□ 0.09
PTCH1-202ENST00000375271 THP07101 528 aa15.63■□□□□ 0.09
PTCH1-202ENST00000375271 LIG1P18858 919 aa15.63■□□□□ 0.09
PTCH1-202ENST00000375271 HOXA9P31269 272 aa15.63■□□□□ 0.09
PTCH1-202ENST00000375271 CSTF1Q05048 431 aaKnown RBP15.63■□□□□ 0.09
PTCH1-202ENST00000375271 RTP2Q5QGT7 225 aa15.63■□□□□ 0.09
PTCH1-202ENST00000375271 LILRA6Q6PI73 481 aa15.63■□□□□ 0.09
PTCH1-202ENST00000375271 PARM1Q6UWI2 310 aa15.63■□□□□ 0.09
PTCH1-202ENST00000375271 IFNLR1Q8IU57 520 aaPredicted RBP15.63■□□□□ 0.09
PTCH1-202ENST00000375271 SLC7A14Q8TBB6 771 aa15.63■□□□□ 0.09
PTCH1-202ENST00000375271 ASAP3Q8TDY4 903 aa15.63■□□□□ 0.09
PTCH1-202ENST00000375271 PIK3R5Q8WYR1 880 aa15.63■□□□□ 0.09
PTCH1-202ENST00000375271 HAS1Q92839 578 aa15.63■□□□□ 0.09
PTCH1-202ENST00000375271 FGF14Q92915 247 aa15.63■□□□□ 0.09
PTCH1-202ENST00000375271 PRIMPOLQ96LW4 560 aa15.63■□□□□ 0.09
PTCH1-202ENST00000375271 NFKBIZQ9BYH8 718 aa15.63■□□□□ 0.09
PTCH1-202ENST00000375271 C2orf40Q9H1Z8 148 aa15.63■□□□□ 0.09
PTCH1-202ENST00000375271 ZSWIM6Q9HCJ5 1215 aa15.63■□□□□ 0.09
PTCH1-202ENST00000375271 XPNPEP1Q9NQW7 623 aa15.63■□□□□ 0.09
PTCH1-202ENST00000375271 PDRG1Q9NUG6 133 aa15.63■□□□□ 0.09
PTCH1-202ENST00000375271 FBXO4Q9UKT5 387 aa15.63■□□□□ 0.09
PTCH1-202ENST00000375271 MRPS17Q9Y2R5 130 aaKnown RBP15.63■□□□□ 0.09
PTCH1-202ENST00000375271 MYH15Q9Y2K3 1946 aa15.62■□□□□ 0.09
PTCH1-202ENST00000375271 FAM170BA6NMN3 283 aa15.62■□□□□ 0.09
PTCH1-202ENST00000375271 KRT2P35908 639 aa15.62■□□□□ 0.09
PTCH1-202ENST00000375271 NPY5RQ15761 445 aa15.62■□□□□ 0.09
PTCH1-202ENST00000375271 ZNF528Q3MIS6 628 aa15.62■□□□□ 0.09
PTCH1-202ENST00000375271 PABPC1LQ4VXU2 614 aaKnown RBP15.62■□□□□ 0.09
PTCH1-202ENST00000375271 SLC44A4Q53GD3 710 aa15.62■□□□□ 0.09
PTCH1-202ENST00000375271 ZBTB41Q5SVQ8 909 aa15.62■□□□□ 0.09
PTCH1-202ENST00000375271 RSPO2Q6UXX9 243 aaPredicted RBP15.62■□□□□ 0.09
PTCH1-202ENST00000375271 MAEAQ7L5Y9 396 aa15.62■□□□□ 0.09
PTCH1-202ENST00000375271 APBB1IPQ7Z5R6 666 aaPredicted RBP15.62■□□□□ 0.09
PTCH1-202ENST00000375271 DCLK2Q8N568 766 aa15.62■□□□□ 0.09
PTCH1-202ENST00000375271 MCPH1Q8NEM0 835 aa15.62■□□□□ 0.09
PTCH1-202ENST00000375271 FGF13Q92913 245 aa15.62■□□□□ 0.09
PTCH1-202ENST00000375271 KXD1Q9BQD3 176 aa15.62■□□□□ 0.09
PTCH1-202ENST00000375271 DLGAP2Q9P1A6 1054 aa15.62■□□□□ 0.09
PTCH1-202ENST00000375271 RAB23Q9ULC3 237 aa15.62■□□□□ 0.09
PTCH1-202ENST00000375271 PCDHGA2Q9Y5H1 932 aa15.62■□□□□ 0.09
PTCH1-202ENST00000375271 STK36Q9NRP7 1315 aa15.62■□□□□ 0.09
PTCH1-202ENST00000375271 A0A1B0GUA9 196 aa15.61■□□□□ 0.09
PTCH1-202ENST00000375271 SLITRK3O94933 977 aa15.61■□□□□ 0.09
PTCH1-202ENST00000375271 KIF4AO95239 1232 aa15.61■□□□□ 0.09
PTCH1-202ENST00000375271 EFEMP2O95967 443 aa15.61■□□□□ 0.09
PTCH1-202ENST00000375271 GLRA2P23416 452 aa15.61■□□□□ 0.09
PTCH1-202ENST00000375271 ARL2P36404 184 aa15.61■□□□□ 0.09
PTCH1-202ENST00000375271 NTHL1P78549 312 aa15.61■□□□□ 0.09
PTCH1-202ENST00000375271 PRPF4BQ13523 1007 aaKnown RBP15.61■□□□□ 0.09
PTCH1-202ENST00000375271 TRIM29Q14134 588 aa15.61■□□□□ 0.09
PTCH1-202ENST00000375271 PPP2R5DQ14738 602 aa15.61■□□□□ 0.09
PTCH1-202ENST00000375271 AMHR2Q16671 573 aa15.61■□□□□ 0.09
PTCH1-202ENST00000375271 RSPO4Q2I0M5 234 aaPredicted RBP15.61■□□□□ 0.09
PTCH1-202ENST00000375271 VARS2Q5ST30 1063 aaKnown RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms