RNA–Protein interactions for RNA: ENST00000373380.5

CSMD2-204, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2 BASIC

Gene CSMD2, Length 4,379 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-204ENST00000373380 TUBB6Q9BUF5 446 aa11.56□□□□□ -0.56
CSMD2-204ENST00000373380 SMYD3Q9H7B4 428 aa11.56□□□□□ -0.56
CSMD2-204ENST00000373380 ECT2Q9H8V3 914 aa11.56□□□□□ -0.56
CSMD2-204ENST00000373380 HAUS2Q9NVX0 235 aa11.56□□□□□ -0.56
CSMD2-204ENST00000373380 KBTBD4Q9NVX7 518 aa11.56□□□□□ -0.56
CSMD2-204ENST00000373380 PRR12Q9ULL5 1215 aa11.56□□□□□ -0.56
CSMD2-204ENST00000373380 SCAF8Q9UPN6 1271 aaKnown RBP11.56□□□□□ -0.56
CSMD2-204ENST00000373380 hCG_2014768A0A024R1R8 64 aa11.56□□□□□ -0.56
CSMD2-204ENST00000373380 KRT38O76015 456 aa11.56□□□□□ -0.56
CSMD2-204ENST00000373380 COMTP21964 271 aa11.56□□□□□ -0.56
CSMD2-204ENST00000373380 EPHB1P54762 984 aa11.56□□□□□ -0.56
CSMD2-204ENST00000373380 CATSPER3Q86XQ3 398 aa11.56□□□□□ -0.56
CSMD2-204ENST00000373380 TTC13Q8NBP0 860 aa11.56□□□□□ -0.56
CSMD2-204ENST00000373380 ATL2Q8NHH9 583 aa11.56□□□□□ -0.56
CSMD2-204ENST00000373380 PIP4K2CQ8TBX8 421 aa11.56□□□□□ -0.56
CSMD2-204ENST00000373380 PSPC1Q8WXF1 523 aaKnown RBP11.56□□□□□ -0.56
CSMD2-204ENST00000373380 SLC5A4Q9NY91 659 aa11.56□□□□□ -0.56
CSMD2-204ENST00000373380 PSD3Q9NYI0 1048 aa11.56□□□□□ -0.56
CSMD2-204ENST00000373380 NAGPAQ9UK23 515 aa11.56□□□□□ -0.56
CSMD2-204ENST00000373380 ATF5Q9Y2D1 282 aaPredicted RBP11.56□□□□□ -0.56
CSMD2-204ENST00000373380 CCDC195A0A1B0GUA6 201 aa11.56□□□□□ -0.56
CSMD2-204ENST00000373380 HAUS5O94927 633 aa11.56□□□□□ -0.56
CSMD2-204ENST00000373380 ADRA2BP18089 450 aa11.56□□□□□ -0.56
CSMD2-204ENST00000373380 RPA1P27694 616 aa11.56□□□□□ -0.56
CSMD2-204ENST00000373380 CAPRIN2Q6IMN6 1127 aaKnown RBP11.56□□□□□ -0.56
CSMD2-204ENST00000373380 PACSIN1Q9BY11 444 aa11.56□□□□□ -0.56
CSMD2-204ENST00000373380 SFNP31947 248 aa11.55□□□□□ -0.56
CSMD2-204ENST00000373380 FXR2P51116 673 aaKnown RBP eCLIP11.55□□□□□ -0.56
CSMD2-204ENST00000373380 NFX1Q12986 1120 aaKnown RBP11.55□□□□□ -0.56
CSMD2-204ENST00000373380 MKRN3Q13064 507 aaKnown RBP11.55□□□□□ -0.56
CSMD2-204ENST00000373380 NR1H3Q13133 447 aa11.55□□□□□ -0.56
CSMD2-204ENST00000373380 RHPN2Q8IUC4 686 aa11.55□□□□□ -0.56
CSMD2-204ENST00000373380 GPD1LQ8N335 351 aa11.55□□□□□ -0.56
CSMD2-204ENST00000373380 LRGUKQ96M69 825 aa11.55□□□□□ -0.56
CSMD2-204ENST00000373380 VPS11Q9H270 941 aa11.55□□□□□ -0.56
CSMD2-204ENST00000373380 TUFT1Q9NNX1 390 aa11.55□□□□□ -0.56
CSMD2-204ENST00000373380 KDM3BQ7LBC6 1761 aa11.55□□□□□ -0.56
CSMD2-204ENST00000373380 RSPH10B2B2RC85 870 aa11.55□□□□□ -0.56
CSMD2-204ENST00000373380 RSPH10BP0C881 870 aa11.55□□□□□ -0.56
CSMD2-204ENST00000373380 RFX1P22670 979 aa11.55□□□□□ -0.56
CSMD2-204ENST00000373380 ARFIP2P53365 341 aa11.55□□□□□ -0.56
CSMD2-204ENST00000373380 SLC29A2Q14542 456 aa11.55□□□□□ -0.56
CSMD2-204ENST00000373380 CATSPER4Q7RTX7 472 aa11.55□□□□□ -0.56
CSMD2-204ENST00000373380 TTC25Q96NG3 672 aa11.55□□□□□ -0.56
CSMD2-204ENST00000373380 SEMA6BQ9H3T3 888 aa11.55□□□□□ -0.56
CSMD2-204ENST00000373380 FAM217BQ9NTX9 383 aaPredicted RBP11.55□□□□□ -0.56
CSMD2-204ENST00000373380 ARHGAP20Q9P2F6 1191 aa11.55□□□□□ -0.56
CSMD2-204ENST00000373380 CHD2O14647 1828 aaKnown RBP11.55□□□□□ -0.56
CSMD2-204ENST00000373380 CREB3O43889 395 aa11.55□□□□□ -0.56
CSMD2-204ENST00000373380 CYP11B2P19099 503 aa11.55□□□□□ -0.56
CSMD2-204ENST00000373380 BCAR1P56945 870 aa11.55□□□□□ -0.56
CSMD2-204ENST00000373380 HERVK_113P62684 666 aa11.55□□□□□ -0.56
CSMD2-204ENST00000373380 RC3H1Q5TC82 1133 aaKnown RBP11.55□□□□□ -0.56
CSMD2-204ENST00000373380 DPY19L2Q6NUT2 758 aa11.55□□□□□ -0.56
CSMD2-204ENST00000373380 EXOC8Q8IYI6 725 aa11.55□□□□□ -0.56
CSMD2-204ENST00000373380 RTKN2Q8IZC4 609 aa11.55□□□□□ -0.56
CSMD2-204ENST00000373380 C4orf33Q8N1A6 199 aa11.55□□□□□ -0.56
CSMD2-204ENST00000373380 RYBPQ8N488 228 aaPredicted RBP11.55□□□□□ -0.56
CSMD2-204ENST00000373380 CEP70Q8NHQ1 597 aa11.55□□□□□ -0.56
CSMD2-204ENST00000373380 XPO6Q96QU8 1125 aaKnown RBP11.55□□□□□ -0.56
CSMD2-204ENST00000373380 RBM15Q96T37 977 aaKnown RBP eCLIP11.55□□□□□ -0.56
CSMD2-204ENST00000373380 TTC1Q99614 292 aa11.55□□□□□ -0.56
CSMD2-204ENST00000373380 TMEM117Q9H0C3 514 aa11.55□□□□□ -0.56
CSMD2-204ENST00000373380 SLC16A3O15427 465 aaKnown RBP11.54□□□□□ -0.56
CSMD2-204ENST00000373380 FGFR2P21802 821 aa11.54□□□□□ -0.56
CSMD2-204ENST00000373380 NPEPPSP55786 919 aa11.54□□□□□ -0.56
CSMD2-204ENST00000373380 CCNA1P78396 465 aa11.54□□□□□ -0.56
CSMD2-204ENST00000373380 ART3Q13508 389 aa11.54□□□□□ -0.56
CSMD2-204ENST00000373380 SLC12A1Q13621 1099 aa11.54□□□□□ -0.56
CSMD2-204ENST00000373380 WDR93Q6P2C0 686 aa11.54□□□□□ -0.56
CSMD2-204ENST00000373380 LCA5Q86VQ0 697 aa11.54□□□□□ -0.56
CSMD2-204ENST00000373380 PDZD8Q8NEN9 1154 aa11.54□□□□□ -0.56
CSMD2-204ENST00000373380 MTRQ99707 1265 aa11.54□□□□□ -0.56
CSMD2-204ENST00000373380 ERP44Q9BS26 406 aa11.54□□□□□ -0.56
CSMD2-204ENST00000373380 IP6K2Q9UHH9 426 aa11.54□□□□□ -0.56
CSMD2-204ENST00000373380 A0A087X0B3 334 aa11.54□□□□□ -0.56
CSMD2-204ENST00000373380 M0QYV0 167 aa11.54□□□□□ -0.56
CSMD2-204ENST00000373380 HSPA4LO95757 839 aa11.54□□□□□ -0.56
CSMD2-204ENST00000373380 OATP04181 439 aa11.54□□□□□ -0.56
CSMD2-204ENST00000373380 CHRNA5P30532 468 aa11.54□□□□□ -0.56
CSMD2-204ENST00000373380 HSPA9P38646 679 aaKnown RBP11.54□□□□□ -0.56
CSMD2-204ENST00000373380 CASP2P42575 452 aa11.54□□□□□ -0.56
CSMD2-204ENST00000373380 CASP4P49662 377 aa11.54□□□□□ -0.56
CSMD2-204ENST00000373380 THOC5Q13769 683 aaKnown RBP11.54□□□□□ -0.56
CSMD2-204ENST00000373380 SNRNP35Q16560 246 aaKnown RBP11.54□□□□□ -0.56
CSMD2-204ENST00000373380 FAM102AQ5T9C2 384 aaPredicted RBP11.54□□□□□ -0.56
CSMD2-204ENST00000373380 PLA2G4FQ68DD2 849 aa11.54□□□□□ -0.56
CSMD2-204ENST00000373380 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.54□□□□□ -0.56
CSMD2-204ENST00000373380 CYFIP2Q96F07 1278 aa11.54□□□□□ -0.56
CSMD2-204ENST00000373380 SEC16BQ96JE7 1060 aa11.54□□□□□ -0.56
CSMD2-204ENST00000373380 TRAIPQ9BWF2 469 aa11.54□□□□□ -0.56
CSMD2-204ENST00000373380 ANKZF1Q9H8Y5 726 aa11.54□□□□□ -0.56
CSMD2-204ENST00000373380 ZNF302Q9NR11 478 aa11.54□□□□□ -0.56
CSMD2-204ENST00000373380 ASNSD1Q9NWL6 643 aa11.54□□□□□ -0.56
CSMD2-204ENST00000373380 GPR75-ASB3A0A0A6YYF3 556 aa11.54□□□□□ -0.56
CSMD2-204ENST00000373380 AGTP01019 485 aa11.54□□□□□ -0.56
CSMD2-204ENST00000373380 TBXAS1P24557 533 aaPredicted RBP11.54□□□□□ -0.56
CSMD2-204ENST00000373380 CDH6P55285 790 aa11.54□□□□□ -0.56
CSMD2-204ENST00000373380 STX1BP61266 288 aa11.54□□□□□ -0.56
CSMD2-204ENST00000373380 SPATA21Q7Z572 469 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms