RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 ITIH4Q14624 930 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 FASTKD3Q14CZ7 662 aaKnown RBP5.81□□□□□ -1.48
ATG4A-204ENST00000372246 USH1GQ495M9 461 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 KHDC1Q4VXA5 237 aaKnown RBP5.81□□□□□ -1.48
ATG4A-204ENST00000372246 MDH1BQ5I0G3 518 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 TMEM63BQ5T3F8 832 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 SYCP2LQ5T4T6 812 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 C1QTNF12Q5T7M4 302 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 DSTYKQ6XUX3 929 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 VSIG1Q86XK7 387 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 ARHGEF19Q8IW93 802 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 TEKT4Q8WW24 435 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 NRG4Q8WWG1 115 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 PGM2Q96G03 612 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 NUDCD1Q96RS6 583 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 PCDHB18PQ96TA0 734 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 RAB17Q9H0T7 212 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 BHMT2Q9H2M3 363 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 DENND2DQ9H6A0 471 aaPredicted RBP5.81□□□□□ -1.48
ATG4A-204ENST00000372246 C10orf88Q9H8K7 445 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 CNOT10Q9H9A5 744 aaKnown RBP5.81□□□□□ -1.48
ATG4A-204ENST00000372246 ATP8A2Q9NTI2 1148 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 CPSF2Q9P2I0 782 aaKnown RBP5.81□□□□□ -1.48
ATG4A-204ENST00000372246 STK17AQ9UEE5 414 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 LNPEPQ9UIQ6 1025 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 CHKBQ9Y259 395 aa5.81□□□□□ -1.48
ATG4A-204ENST00000372246 R3HDM2Q9Y2K5 976 aaKnown RBP5.81□□□□□ -1.48
ATG4A-204ENST00000372246 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.81□□□□□ -1.48
ATG4A-204ENST00000372246 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.8□□□□□ -1.48
ATG4A-204ENST00000372246 ANKRD33BA6NCL7 494 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 GOLGA8RI6L899 631 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 LAD1O00515 517 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 TGFB1I1O43294 461 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 GJB6O95452 261 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 FTLP02792 175 aaPredicted RBP5.8□□□□□ -1.48
ATG4A-204ENST00000372246 NUDT17P0C025 328 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 UBTFL6P0CB48 400 aaPredicted RBP5.8□□□□□ -1.48
ATG4A-204ENST00000372246 ZSCAN5DPP0CG00 497 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 ZCCHC18P0CG32 403 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 AKR1B1P15121 316 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 GNAZP19086 355 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 CCND1P24385 295 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 GNA11P29992 359 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 STX2P32856 288 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 PTDSS1P48651 473 aaKnown RBP5.8□□□□□ -1.48
ATG4A-204ENST00000372246 PDE6CP51160 858 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 HSPA2P54652 639 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 JAM2P57087 298 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 UBE4AQ14139 1066 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 RRP1BQ14684 758 aaKnown RBP5.8□□□□□ -1.48
ATG4A-204ENST00000372246 TMED2Q15363 201 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 CRELD2Q6UXH1 353 aaPredicted RBP5.8□□□□□ -1.48
ATG4A-204ENST00000372246 FBXO33Q7Z6M2 555 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 ADGRF4Q8IZF3 695 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 GLIS1Q8NBF1 620 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 CTNNBL1Q8WYA6 563 aaPredicted RBP5.8□□□□□ -1.48
ATG4A-204ENST00000372246 SYN2Q92777 582 aaPredicted RBP5.8□□□□□ -1.48
ATG4A-204ENST00000372246 THAP11Q96EK4 314 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 MKNK1Q9BUB5 465 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 TBC1D10AQ9BXI6 508 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 PAPOLBQ9NRJ5 636 aaKnown RBP5.8□□□□□ -1.48
ATG4A-204ENST00000372246 ETAA1Q9NY74 926 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 TTC7AQ9ULT0 858 aaPredicted RBP5.8□□□□□ -1.48
ATG4A-204ENST00000372246 NENFQ9UMX5 172 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 RPS6KL1Q9Y6S9 549 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 hCG_2014768A0A024R1R8 64 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 A0A1W2PPM1 405 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 RNF223E7ERA6 249 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 POC1B-GALNT4F8VUJ3 575 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 EML1O00423 815 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 KRT36O76013 467 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 SUN1O94901 812 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 SNUPNO95149 360 aaKnown RBP5.8□□□□□ -1.48
ATG4A-204ENST00000372246 SGPL1O95470 568 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 ADH1BP00325 375 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 TPBGLP0DKB5 382 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 ETS1P14921 441 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 CNGA1P29973 690 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 STAT1P42224 750 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 SLC12A3P55017 1021 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 ATP11AP98196 1134 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 KRT17Q04695 432 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 GAD2Q05329 585 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 ADCY2Q08462 1091 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 RIPK1Q13546 671 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 KNOP1Q1ED39 458 aaKnown RBP5.8□□□□□ -1.48
ATG4A-204ENST00000372246 PLEKHG4Q58EX7 1191 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 FAM182BQ5T319 152 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 TBC1D9BQ66K14 1250 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 DPP8Q6V1X1 898 aaPredicted RBP5.8□□□□□ -1.48
ATG4A-204ENST00000372246 BRINP3Q76B58 766 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 ANKS1BQ7Z6G8 1248 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 CCDC65Q8IXS2 484 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 RFFLQ8WZ73 363 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 SLC5A5Q92911 643 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 CNKSR1Q969H4 720 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 EMID1Q96A84 441 aaPredicted RBP5.8□□□□□ -1.48
ATG4A-204ENST00000372246 ACSF2Q96CM8 615 aaPredicted RBP5.8□□□□□ -1.48
ATG4A-204ENST00000372246 TSC22D3Q99576 134 aa5.8□□□□□ -1.48
ATG4A-204ENST00000372246 MIPEPQ99797 713 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms