RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 TOPORSQ9NS56 1045 aaPredicted RBP13.8□□□□□ -0.2
GPC3-201ENST00000370818 KLC4Q9NSK0 619 aa13.8□□□□□ -0.2
GPC3-201ENST00000370818 COQ4Q9Y3A0 265 aa13.8□□□□□ -0.2
GPC3-201ENST00000370818 SOCS7O14512 581 aa13.8□□□□□ -0.2
GPC3-201ENST00000370818 KIF3CO14782 793 aa13.8□□□□□ -0.2
GPC3-201ENST00000370818 NEBLO76041 1014 aa13.8□□□□□ -0.2
GPC3-201ENST00000370818 KIAA0754O94854 1291 aa13.8□□□□□ -0.2
GPC3-201ENST00000370818 GARTP22102 1010 aa13.8□□□□□ -0.2
GPC3-201ENST00000370818 DNA2P51530 1060 aa13.8□□□□□ -0.2
GPC3-201ENST00000370818 CYP24A1Q07973 514 aa13.8□□□□□ -0.2
GPC3-201ENST00000370818 LY6KQ17RY6 165 aa13.8□□□□□ -0.2
GPC3-201ENST00000370818 KRT39Q6A163 491 aa13.8□□□□□ -0.2
GPC3-201ENST00000370818 GSPT2Q8IYD1 628 aaKnown RBP13.8□□□□□ -0.2
GPC3-201ENST00000370818 TMC2Q8TDI7 906 aa13.8□□□□□ -0.2
GPC3-201ENST00000370818 KCNN1Q92952 543 aa13.8□□□□□ -0.2
GPC3-201ENST00000370818 KREMEN1Q96MU8 473 aa13.8□□□□□ -0.2
GPC3-201ENST00000370818 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.8□□□□□ -0.2
GPC3-201ENST00000370818 TMCO5BA8MYB1 307 aa13.79□□□□□ -0.2
GPC3-201ENST00000370818 NDUFAB1O14561 156 aa13.79□□□□□ -0.2
GPC3-201ENST00000370818 RASSF9O75901 435 aa13.79□□□□□ -0.2
GPC3-201ENST00000370818 SLC25A27O95847 323 aa13.79□□□□□ -0.2
GPC3-201ENST00000370818 TGFB3P10600 412 aa13.79□□□□□ -0.2
GPC3-201ENST00000370818 GLRA2P23416 452 aa13.79□□□□□ -0.2
GPC3-201ENST00000370818 ARL2P36404 184 aa13.79□□□□□ -0.2
GPC3-201ENST00000370818 TARBP2Q15633 366 aaKnown RBP13.79□□□□□ -0.2
GPC3-201ENST00000370818 GPAT2Q6NUI2 795 aa13.79□□□□□ -0.2
GPC3-201ENST00000370818 DPY19L2Q6NUT2 758 aa13.79□□□□□ -0.2
GPC3-201ENST00000370818 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.79□□□□□ -0.22e-7■■■□□ 16.4
GPC3-201ENST00000370818 GPD1LQ8N335 351 aa13.79□□□□□ -0.2
GPC3-201ENST00000370818 SLC20A1Q8WUM9 679 aa13.79□□□□□ -0.2
GPC3-201ENST00000370818 TMEM8AQ9HCN3 771 aa13.79□□□□□ -0.2
GPC3-201ENST00000370818 TAS2R14Q9NYV8 317 aa13.79□□□□□ -0.2
GPC3-201ENST00000370818 ARIH2O95376 493 aa13.79□□□□□ -0.2
GPC3-201ENST00000370818 GGPS1O95749 300 aa13.79□□□□□ -0.2
GPC3-201ENST00000370818 SKOR1P84550 965 aa13.79□□□□□ -0.2
GPC3-201ENST00000370818 CCDC181Q5TID7 509 aa13.79□□□□□ -0.2
GPC3-201ENST00000370818 METTL7BQ6UX53 244 aa13.79□□□□□ -0.2
GPC3-201ENST00000370818 SLFN11Q7Z7L1 901 aa13.79□□□□□ -0.2
GPC3-201ENST00000370818 SPATS2Q86XZ4 545 aaKnown RBP13.79□□□□□ -0.2
GPC3-201ENST00000370818 TAS1R2Q8TE23 839 aa13.79□□□□□ -0.2
GPC3-201ENST00000370818 HDAC7Q8WUI4 952 aa13.79□□□□□ -0.2
GPC3-201ENST00000370818 DNAJC25-GNG10A0A024R161 153 aa13.78□□□□□ -0.2
GPC3-201ENST00000370818 H0YCG3 227 aa13.78□□□□□ -0.2
GPC3-201ENST00000370818 ZBTB48P10074 688 aaPredicted RBP13.78□□□□□ -0.2
GPC3-201ENST00000370818 GJA5P36382 358 aa13.78□□□□□ -0.2
GPC3-201ENST00000370818 PAFAH1B1P43034 410 aa13.78□□□□□ -0.2
GPC3-201ENST00000370818 GPC3P51654 580 aa13.78□□□□□ -0.2
GPC3-201ENST00000370818 CRYMQ14894 314 aa13.78□□□□□ -0.2
GPC3-201ENST00000370818 IFI16Q16666 785 aaKnown RBP13.78□□□□□ -0.2
GPC3-201ENST00000370818 CFAP221Q4G0U5 840 aa13.78□□□□□ -0.2
GPC3-201ENST00000370818 NAIF1Q69YI7 327 aaPredicted RBP13.78□□□□□ -0.2
GPC3-201ENST00000370818 YTHDF3Q7Z739 585 aaKnown RBP13.78□□□□□ -0.2
GPC3-201ENST00000370818 SLC7A3Q8WY07 619 aa13.78□□□□□ -0.2
GPC3-201ENST00000370818 BICD1Q96G01 975 aa13.78□□□□□ -0.2
GPC3-201ENST00000370818 AGPAT1Q99943 283 aa13.78□□□□□ -0.2
GPC3-201ENST00000370818 FAM213AQ9BRX8 229 aa13.78□□□□□ -0.2
GPC3-201ENST00000370818 LRRC1Q9BTT6 524 aa13.78□□□□□ -0.2
GPC3-201ENST00000370818 RBM12Q9NTZ6 932 aaKnown RBP13.78□□□□□ -0.2
GPC3-201ENST00000370818 RNF14Q9UBS8 474 aa13.78□□□□□ -0.2
GPC3-201ENST00000370818 MYH9P35579 1960 aaKnown RBP13.78□□□□□ -0.2
GPC3-201ENST00000370818 RTN2O75298 545 aa13.78□□□□□ -0.2
GPC3-201ENST00000370818 TMEM253P0C7T8 217 aa13.78□□□□□ -0.2
GPC3-201ENST00000370818 TNFAIP3P21580 790 aa13.78□□□□□ -0.2
GPC3-201ENST00000370818 TCF7P36402 384 aaPredicted RBP13.78□□□□□ -0.2
GPC3-201ENST00000370818 MATR3P43243 847 aaKnown RBP eCLIP13.78□□□□□ -0.26e-7■■■□□ 15.9
GPC3-201ENST00000370818 NAMPTP43490 491 aa13.78□□□□□ -0.2
GPC3-201ENST00000370818 STAT5BP51692 787 aa13.78□□□□□ -0.2
GPC3-201ENST00000370818 SV2AQ7L0J3 742 aa13.78□□□□□ -0.2
GPC3-201ENST00000370818 FAM71AQ8IYT1 594 aa13.78□□□□□ -0.2
GPC3-201ENST00000370818 HELQQ8TDG4 1101 aa13.78□□□□□ -0.2
GPC3-201ENST00000370818 VTI1AQ96AJ9 217 aa13.78□□□□□ -0.2
GPC3-201ENST00000370818 FAM84AQ96KN4 292 aa13.78□□□□□ -0.2
GPC3-201ENST00000370818 OSGEPQ9NPF4 335 aa13.78□□□□□ -0.2
GPC3-201ENST00000370818 STYXL1Q9Y6J8 313 aa13.78□□□□□ -0.2
GPC3-201ENST00000370818 LRRC37A2A6NM11 1700 aa13.78□□□□□ -0.2
GPC3-201ENST00000370818 GOLGA8KD6RF30 607 aa13.78□□□□□ -0.2
GPC3-201ENST00000370818 TULP1O00294 542 aaPredicted RBP13.78□□□□□ -0.2
GPC3-201ENST00000370818 ECM2O94769 699 aaPredicted RBP13.78□□□□□ -0.2
GPC3-201ENST00000370818 KIF4AO95239 1232 aa13.78□□□□□ -0.2
GPC3-201ENST00000370818 DLATP10515 647 aaKnown RBP13.78□□□□□ -0.2
GPC3-201ENST00000370818 GTF2H1P32780 548 aa13.78□□□□□ -0.2
GPC3-201ENST00000370818 MRPS25P82663 173 aaKnown RBP13.78□□□□□ -0.2
GPC3-201ENST00000370818 RPS6KA1Q15418 735 aa13.78□□□□□ -0.2
GPC3-201ENST00000370818 NBPF20Q3BBV1 942 aa13.78□□□□□ -0.2
GPC3-201ENST00000370818 PPM1KQ8N3J5 372 aa13.78□□□□□ -0.2
GPC3-201ENST00000370818 FBXL13Q8NEE6 735 aa13.78□□□□□ -0.2
GPC3-201ENST00000370818 SEPT1Q8WYJ6 367 aa13.78□□□□□ -0.2
GPC3-201ENST00000370818 ELMO3Q96BJ8 720 aa13.78□□□□□ -0.2
GPC3-201ENST00000370818 HAPLN2Q9GZV7 340 aa13.78□□□□□ -0.2
GPC3-201ENST00000370818 DMGDHQ9UI17 866 aaKnown RBP13.78□□□□□ -0.2
GPC3-201ENST00000370818 NCANO14594 1321 aa13.77□□□□□ -0.2
GPC3-201ENST00000370818 FAM170AA1A519 330 aa13.77□□□□□ -0.21
GPC3-201ENST00000370818 LRRIQ4A6NIV6 560 aa13.77□□□□□ -0.21
GPC3-201ENST00000370818 EDN1P05305 212 aa13.77□□□□□ -0.21
GPC3-201ENST00000370818 ABCB4P21439 1286 aa13.77□□□□□ -0.21
GPC3-201ENST00000370818 CALRP27797 417 aaKnown RBP13.77□□□□□ -0.21
GPC3-201ENST00000370818 ABCD1P33897 745 aa13.77□□□□□ -0.21
GPC3-201ENST00000370818 LIG4P49917 911 aa13.77□□□□□ -0.21
GPC3-201ENST00000370818 WNT7BP56706 349 aa13.77□□□□□ -0.21
GPC3-201ENST00000370818 ENPEPQ07075 957 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms