RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 RPL13P26373 211 aaKnown RBP17.27■□□□□ 0.36
CHD1L-203ENST00000369259 MAGEA8P43361 318 aa17.27■□□□□ 0.36
CHD1L-203ENST00000369259 KRT17Q04695 432 aa17.27■□□□□ 0.36
CHD1L-203ENST00000369259 UBE4AQ14139 1066 aa17.27■□□□□ 0.36
CHD1L-203ENST00000369259 SPARCL1Q14515 664 aa17.27■□□□□ 0.36
CHD1L-203ENST00000369259 PALB2Q86YC2 1186 aa17.27■□□□□ 0.36
CHD1L-203ENST00000369259 SLCO2A1Q92959 643 aa17.27■□□□□ 0.36
CHD1L-203ENST00000369259 GJA10Q969M2 543 aa17.27■□□□□ 0.36
CHD1L-203ENST00000369259 CCDC28BQ9BUN5 200 aa17.27■□□□□ 0.36
CHD1L-203ENST00000369259 WNT8AQ9H1J5 351 aa17.27■□□□□ 0.36
CHD1L-203ENST00000369259 CCDC87Q9NVE4 849 aa17.27■□□□□ 0.36
CHD1L-203ENST00000369259 STX18Q9P2W9 335 aaKnown RBP17.27■□□□□ 0.36
CHD1L-203ENST00000369259 ASIC3Q9UHC3 531 aa17.27■□□□□ 0.36
CHD1L-203ENST00000369259 PCDHA12Q9UN75 941 aa17.27■□□□□ 0.36
CHD1L-203ENST00000369259 DCCP43146 1447 aa17.27■□□□□ 0.35
CHD1L-203ENST00000369259 SLIT2O94813 1529 aa17.27■□□□□ 0.35
CHD1L-203ENST00000369259 CCDC22O60826 627 aa17.26■□□□□ 0.35
CHD1L-203ENST00000369259 ADCY7P51828 1080 aa17.26■□□□□ 0.35
CHD1L-203ENST00000369259 MYBPC3Q14896 1274 aa17.26■□□□□ 0.35
CHD1L-203ENST00000369259 ARSHQ5FYA8 562 aa17.26■□□□□ 0.35
CHD1L-203ENST00000369259 USP17L2Q6R6M4 530 aa17.26■□□□□ 0.35
CHD1L-203ENST00000369259 RNF207Q6ZRF8 634 aa17.26■□□□□ 0.35
CHD1L-203ENST00000369259 LCA5Q86VQ0 697 aa17.26■□□□□ 0.35
CHD1L-203ENST00000369259 DENND1AQ8TEH3 1009 aa17.26■□□□□ 0.35
CHD1L-203ENST00000369259 PIGBQ92521 554 aa17.26■□□□□ 0.35
CHD1L-203ENST00000369259 SNF8Q96H20 258 aa17.26■□□□□ 0.35
CHD1L-203ENST00000369259 FAM84BQ96KN1 310 aaPredicted RBP17.26■□□□□ 0.35
CHD1L-203ENST00000369259 ZNF184Q99676 751 aaPredicted RBP17.26■□□□□ 0.35
CHD1L-203ENST00000369259 SYNCQ9H7C4 482 aa17.26■□□□□ 0.35
CHD1L-203ENST00000369259 DNAJC18Q9H819 358 aa17.26■□□□□ 0.35
CHD1L-203ENST00000369259 DDX25Q9UHL0 483 aaKnown RBP17.26■□□□□ 0.35
CHD1L-203ENST00000369259 TMCO1Q9UM00 188 aa17.26■□□□□ 0.35
CHD1L-203ENST00000369259 C10orf71Q711Q0 1435 aa17.26■□□□□ 0.35
CHD1L-203ENST00000369259 LGR5O75473 907 aa17.26■□□□□ 0.35
CHD1L-203ENST00000369259 LYNP07948 512 aa17.26■□□□□ 0.35
CHD1L-203ENST00000369259 SETSIPP0DME0 302 aa17.26■□□□□ 0.35
CHD1L-203ENST00000369259 CHRNB2P17787 502 aa17.26■□□□□ 0.35
CHD1L-203ENST00000369259 SMARCA1P28370 1054 aa17.26■□□□□ 0.35
CHD1L-203ENST00000369259 STAT4Q14765 748 aa17.26■□□□□ 0.35
CHD1L-203ENST00000369259 TCEAL1Q15170 157 aa17.26■□□□□ 0.35
CHD1L-203ENST00000369259 PDK4Q16654 411 aa17.26■□□□□ 0.35
CHD1L-203ENST00000369259 CTC1Q2NKJ3 1217 aa17.26■□□□□ 0.35
CHD1L-203ENST00000369259 NLRP9Q7RTR0 991 aa17.26■□□□□ 0.35
CHD1L-203ENST00000369259 BTBD10Q9BSF8 475 aa17.26■□□□□ 0.35
CHD1L-203ENST00000369259 GPR88Q9GZN0 384 aa17.26■□□□□ 0.35
CHD1L-203ENST00000369259 DNAAF2Q9NVR5 837 aaKnown RBP17.26■□□□□ 0.35
CHD1L-203ENST00000369259 DDX43Q9NXZ2 648 aaKnown RBP17.26■□□□□ 0.35
CHD1L-203ENST00000369259 EURLQ9NYK6 297 aa17.26■□□□□ 0.35
CHD1L-203ENST00000369259 ZNF212Q9UDV6 495 aa17.26■□□□□ 0.35
CHD1L-203ENST00000369259 POTEB3A0JP26 581 aa17.25■□□□□ 0.35
CHD1L-203ENST00000369259 POTECB2RU33 542 aa17.25■□□□□ 0.35
CHD1L-203ENST00000369259 C2CD2LO14523 706 aa17.25■□□□□ 0.35
CHD1L-203ENST00000369259 SPAG7O75391 227 aa17.25■□□□□ 0.35
CHD1L-203ENST00000369259 UBTFL6P0CB48 400 aaPredicted RBP17.25■□□□□ 0.35
CHD1L-203ENST00000369259 DPY19L2Q6NUT2 758 aa17.25■□□□□ 0.35
CHD1L-203ENST00000369259 POTEBQ6S5H4 581 aa17.25■□□□□ 0.35
CHD1L-203ENST00000369259 CLNKQ7Z7G1 428 aa17.25■□□□□ 0.35
CHD1L-203ENST00000369259 MORC4Q8TE76 937 aa17.25■□□□□ 0.35
CHD1L-203ENST00000369259 MAML1Q92585 1016 aa17.25■□□□□ 0.35
CHD1L-203ENST00000369259 TYW1Q9NV66 732 aaKnown RBP17.25■□□□□ 0.35
CHD1L-203ENST00000369259 NIP7Q9Y221 180 aaKnown RBP eCLIP17.25■□□□□ 0.35
CHD1L-203ENST00000369259 hCG_1984214I3L0E3 225 aa17.25■□□□□ 0.35
CHD1L-203ENST00000369259 ZWINTO95229 277 aa17.25■□□□□ 0.35
CHD1L-203ENST00000369259 CYP1A1P04798 512 aaPredicted RBP17.25■□□□□ 0.35
CHD1L-203ENST00000369259 IL2RBP14784 551 aa17.25■□□□□ 0.35
CHD1L-203ENST00000369259 TNNI2P48788 182 aa17.25■□□□□ 0.35
CHD1L-203ENST00000369259 ITGA8P53708 1063 aa17.25■□□□□ 0.35
CHD1L-203ENST00000369259 CAV1Q03135 178 aa17.25■□□□□ 0.35
CHD1L-203ENST00000369259 MESDQ14696 234 aa17.25■□□□□ 0.35
CHD1L-203ENST00000369259 TMED2Q15363 201 aa17.25■□□□□ 0.35
CHD1L-203ENST00000369259 WDR72Q3MJ13 1102 aa17.25■□□□□ 0.35
CHD1L-203ENST00000369259 HS2ST1Q7LGA3 356 aa17.25■□□□□ 0.35
CHD1L-203ENST00000369259 MTDHQ86UE4 582 aaKnown RBP17.25■□□□□ 0.35
CHD1L-203ENST00000369259 RIBC1Q8N443 379 aaPredicted RBP17.25■□□□□ 0.35
CHD1L-203ENST00000369259 ZNF713Q8N859 430 aaPredicted RBP17.25■□□□□ 0.35
CHD1L-203ENST00000369259 DDX17Q92841 729 aaKnown RBP17.25■□□□□ 0.35
CHD1L-203ENST00000369259 CD101Q93033 1021 aa17.25■□□□□ 0.35
CHD1L-203ENST00000369259 STMN2Q93045 179 aa17.25■□□□□ 0.35
CHD1L-203ENST00000369259 PLEKHG4BQ96PX9 1271 aa17.25■□□□□ 0.35
CHD1L-203ENST00000369259 UBN1Q9NPG3 1134 aa17.25■□□□□ 0.35
CHD1L-203ENST00000369259 CYLDQ9NQC7 956 aa17.25■□□□□ 0.35
CHD1L-203ENST00000369259 PCDHB13Q9Y5F0 798 aa17.25■□□□□ 0.35
CHD1L-203ENST00000369259 NUP98P52948 1817 aa17.25■□□□□ 0.35
CHD1L-203ENST00000369259 GSC2O15499 205 aa17.24■□□□□ 0.35
CHD1L-203ENST00000369259 SLC12A3P55017 1021 aa17.24■□□□□ 0.35
CHD1L-203ENST00000369259 CERKLQ49MI3 558 aaPredicted RBP17.24■□□□□ 0.35
CHD1L-203ENST00000369259 SYCP3Q8IZU3 236 aa17.24■□□□□ 0.35
CHD1L-203ENST00000369259 DTX3LQ8TDB6 740 aa17.24■□□□□ 0.35
CHD1L-203ENST00000369259 HAPLN3Q96S86 360 aa17.24■□□□□ 0.35
CHD1L-203ENST00000369259 DDX50Q9BQ39 737 aaKnown RBP17.24■□□□□ 0.35
CHD1L-203ENST00000369259 KRT82Q9NSB4 513 aa17.24■□□□□ 0.35
CHD1L-203ENST00000369259 COMMD3-BMI1R4GMX3 469 aa17.24■□□□□ 0.35
CHD1L-203ENST00000369259 FRMPD4Q14CM0 1322 aa17.24■□□□□ 0.35
CHD1L-203ENST00000369259 PRPF4O43172 522 aaKnown RBP eCLIP17.24■□□□□ 0.355e-9■■■□□ 16.8
CHD1L-203ENST00000369259 IVDP26440 423 aa17.24■□□□□ 0.35
CHD1L-203ENST00000369259 NR1H3Q13133 447 aa17.24■□□□□ 0.35
CHD1L-203ENST00000369259 LSAMPQ13449 338 aa17.24■□□□□ 0.35
CHD1L-203ENST00000369259 RBM26Q5T8P6 1007 aaKnown RBP17.24■□□□□ 0.35
CHD1L-203ENST00000369259 SFR1Q86XK3 245 aa17.24■□□□□ 0.35
CHD1L-203ENST00000369259 KBTBD2Q8IY47 623 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms