RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 KANSL2Q9H9L4 492 aa12.13□□□□□ -0.47
SPTBN1-202ENST00000356805 SLC40A1Q9NP59 571 aa12.13□□□□□ -0.47
SPTBN1-202ENST00000356805 MYO1GB0I1T2 1018 aa12.13□□□□□ -0.47
SPTBN1-202ENST00000356805 INPP5AQ14642 412 aa12.13□□□□□ -0.47
SPTBN1-202ENST00000356805 SETD3Q86TU7 594 aaPredicted RBP12.13□□□□□ -0.47
SPTBN1-202ENST00000356805 PPM1NQ8N819 430 aa12.13□□□□□ -0.47
SPTBN1-202ENST00000356805 ADAMTS1Q9UHI8 967 aa12.13□□□□□ -0.47
SPTBN1-202ENST00000356805 USP17L3A6NCW0 530 aa12.13□□□□□ -0.47
SPTBN1-202ENST00000356805 USP17L4A6NCW7 530 aa12.13□□□□□ -0.47
SPTBN1-202ENST00000356805 LCP1P13796 627 aa12.13□□□□□ -0.47
SPTBN1-202ENST00000356805 NAALADL2Q58DX5 795 aa12.13□□□□□ -0.47
SPTBN1-202ENST00000356805 HEATR6Q6AI08 1181 aaKnown RBP12.13□□□□□ -0.47
SPTBN1-202ENST00000356805 USP17L1Q7RTZ2 530 aa12.13□□□□□ -0.47
SPTBN1-202ENST00000356805 FMR1NBQ8N0W7 255 aaPredicted RBP12.13□□□□□ -0.47
SPTBN1-202ENST00000356805 PCSK1NQ9UHG2 260 aa12.13□□□□□ -0.47
SPTBN1-202ENST00000356805 LZTS3O60299 673 aaPredicted RBP12.13□□□□□ -0.47
SPTBN1-202ENST00000356805 TRADDQ15628 312 aa12.13□□□□□ -0.47
SPTBN1-202ENST00000356805 CYB5D1Q6P9G0 228 aa12.13□□□□□ -0.47
SPTBN1-202ENST00000356805 NUP85Q9BW27 656 aa12.13□□□□□ -0.47
SPTBN1-202ENST00000356805 PAPOLBQ9NRJ5 636 aaKnown RBP12.13□□□□□ -0.47
SPTBN1-202ENST00000356805 CACNA2D2Q9NY47 1150 aa12.13□□□□□ -0.47
SPTBN1-202ENST00000356805 DDX5P17844 614 aaKnown RBP12.13□□□□□ -0.47
SPTBN1-202ENST00000356805 ADORA2BP29275 332 aa12.13□□□□□ -0.47
SPTBN1-202ENST00000356805 PRKCQQ04759 706 aa12.13□□□□□ -0.47
SPTBN1-202ENST00000356805 NR5A1Q13285 461 aa12.13□□□□□ -0.47
SPTBN1-202ENST00000356805 RC3H1Q5TC82 1133 aaKnown RBP12.13□□□□□ -0.47
SPTBN1-202ENST00000356805 TBC1D9BQ66K14 1250 aa12.13□□□□□ -0.47
SPTBN1-202ENST00000356805 TLR2O60603 784 aa12.12□□□□□ -0.47
SPTBN1-202ENST00000356805 KRT17Q04695 432 aa12.12□□□□□ -0.47
SPTBN1-202ENST00000356805 BEST2Q8NFU1 509 aa12.12□□□□□ -0.47
SPTBN1-202ENST00000356805 CNBD2Q96M20 576 aa12.12□□□□□ -0.47
SPTBN1-202ENST00000356805 ACAP3Q96P50 834 aa12.12□□□□□ -0.47
SPTBN1-202ENST00000356805 NOD2Q9HC29 1040 aa12.12□□□□□ -0.47
SPTBN1-202ENST00000356805 M0QYV0 167 aa12.12□□□□□ -0.47
SPTBN1-202ENST00000356805 PTCH1Q13635 1447 aa12.12□□□□□ -0.47
SPTBN1-202ENST00000356805 WDR93Q6P2C0 686 aa12.12□□□□□ -0.47
SPTBN1-202ENST00000356805 CCNI2Q6ZMN8 369 aaPredicted RBP12.12□□□□□ -0.47
SPTBN1-202ENST00000356805 CYGBQ8WWM9 190 aa12.12□□□□□ -0.47
SPTBN1-202ENST00000356805 CATSPER2Q96P56 530 aa12.12□□□□□ -0.47
SPTBN1-202ENST00000356805 SMAPO00193 183 aa12.12□□□□□ -0.47
SPTBN1-202ENST00000356805 CYP21A2P08686 494 aa12.12□□□□□ -0.47
SPTBN1-202ENST00000356805 SOX11P35716 441 aa12.12□□□□□ -0.47
SPTBN1-202ENST00000356805 CTCFP49711 727 aaPredicted RBP12.12□□□□□ -0.47
SPTBN1-202ENST00000356805 ROR1Q01973 937 aa12.12□□□□□ -0.47
SPTBN1-202ENST00000356805 MTMR1Q13613 665 aa12.12□□□□□ -0.47
SPTBN1-202ENST00000356805 C11orf96Q7Z7L8 435 aa12.12□□□□□ -0.47
SPTBN1-202ENST00000356805 CDR2LQ86X02 465 aaPredicted RBP12.12□□□□□ -0.47
SPTBN1-202ENST00000356805 RANBP17Q9H2T7 1088 aaKnown RBP12.12□□□□□ -0.47
SPTBN1-202ENST00000356805 ZNF556Q9HAH1 456 aa12.12□□□□□ -0.47
SPTBN1-202ENST00000356805 SERPINB13Q9UIV8 391 aa12.12□□□□□ -0.47
SPTBN1-202ENST00000356805 MTO1Q9Y2Z2 717 aaKnown RBP12.12□□□□□ -0.47
SPTBN1-202ENST00000356805 ASAP2O43150 1006 aa12.12□□□□□ -0.47
SPTBN1-202ENST00000356805 PRPF3O43395 683 aaKnown RBP12.12□□□□□ -0.47
SPTBN1-202ENST00000356805 USP17L8P0C7I0 530 aa12.12□□□□□ -0.47
SPTBN1-202ENST00000356805 GRIK1P39086 918 aa12.12□□□□□ -0.47
SPTBN1-202ENST00000356805 CRKLP46109 303 aaKnown RBP12.12□□□□□ -0.47
SPTBN1-202ENST00000356805 ZNF280CQ8ND82 737 aa12.12□□□□□ -0.47
SPTBN1-202ENST00000356805 ZNF483Q8TF39 744 aaPredicted RBP12.12□□□□□ -0.47
SPTBN1-202ENST00000356805 ZNF668Q96K58 619 aaPredicted RBP12.12□□□□□ -0.47
SPTBN1-202ENST00000356805 ASCC2Q9H1I8 757 aaPredicted RBP12.12□□□□□ -0.47
SPTBN1-202ENST00000356805 ZNF518AQ6AHZ1 1483 aa12.12□□□□□ -0.47
SPTBN1-202ENST00000356805 ZC3H4Q9UPT8 1303 aaKnown RBP12.12□□□□□ -0.47
SPTBN1-202ENST00000356805 EIF4A1P60842 406 aaKnown RBP12.12□□□□□ -0.47
SPTBN1-202ENST00000356805 CYTH1Q15438 398 aa12.12□□□□□ -0.47
SPTBN1-202ENST00000356805 TSSK1BQ9BXA7 367 aa12.12□□□□□ -0.47
SPTBN1-202ENST00000356805 LDHAP00338 332 aaKnown RBP12.12□□□□□ -0.47
SPTBN1-202ENST00000356805 GTF2H3Q13889 308 aa12.12□□□□□ -0.47
SPTBN1-202ENST00000356805 CCDC144BQ3MJ40 725 aa12.12□□□□□ -0.47
SPTBN1-202ENST00000356805 ASZ1Q8WWH4 475 aa12.12□□□□□ -0.47
SPTBN1-202ENST00000356805 FAM192AQ9GZU8 254 aa12.12□□□□□ -0.47
SPTBN1-202ENST00000356805 PI4KBQ9UBF8 816 aa12.12□□□□□ -0.47
SPTBN1-202ENST00000356805 FBXO2Q9UK22 296 aaPredicted RBP12.12□□□□□ -0.47
SPTBN1-202ENST00000356805 KLHL2O95198 593 aa12.12□□□□□ -0.47
SPTBN1-202ENST00000356805 TFDP2Q14188 446 aa12.12□□□□□ -0.47
SPTBN1-202ENST00000356805 CASP10Q92851 521 aa12.12□□□□□ -0.47
SPTBN1-202ENST00000356805 TRIM63Q969Q1 353 aa12.12□□□□□ -0.47
SPTBN1-202ENST00000356805 MPP6Q9NZW5 540 aa12.12□□□□□ -0.47
SPTBN1-202ENST00000356805 H2AFY2Q9P0M6 372 aaPredicted RBP12.12□□□□□ -0.47
SPTBN1-202ENST00000356805 MEI1Q5TIA1 1274 aa12.11□□□□□ -0.47
SPTBN1-202ENST00000356805 DYNLL2Q96FJ2 89 aa12.11□□□□□ -0.47
SPTBN1-202ENST00000356805 UNC45AQ9H3U1 944 aa12.11□□□□□ -0.47
SPTBN1-202ENST00000356805 ZFATQ9P243 1243 aa12.11□□□□□ -0.47
SPTBN1-202ENST00000356805 CNOT8Q9UFF9 292 aaKnown RBP12.11□□□□□ -0.47
SPTBN1-202ENST00000356805 ZNF839A8K0R7 811 aa12.11□□□□□ -0.47
SPTBN1-202ENST00000356805 NECTIN1Q15223 517 aa12.11□□□□□ -0.47
SPTBN1-202ENST00000356805 ANKRD49Q8WVL7 239 aa12.11□□□□□ -0.47
SPTBN1-202ENST00000356805 XPO6Q96QU8 1125 aaKnown RBP12.11□□□□□ -0.47
SPTBN1-202ENST00000356805 TJP2Q9UDY2 1190 aa12.11□□□□□ -0.47
SPTBN1-202ENST00000356805 SNX24Q9Y343 169 aa12.11□□□□□ -0.47
SPTBN1-202ENST00000356805 HMOX2P30519 316 aa12.11□□□□□ -0.47
SPTBN1-202ENST00000356805 TNFAIP2Q03169 654 aa12.11□□□□□ -0.47
SPTBN1-202ENST00000356805 SYCP2LQ5T4T6 812 aa12.11□□□□□ -0.47
SPTBN1-202ENST00000356805 FAM213AQ9BRX8 229 aa12.11□□□□□ -0.47
SPTBN1-202ENST00000356805 LEMD3Q9Y2U8 911 aa12.11□□□□□ -0.47
SPTBN1-202ENST00000356805 FAM32AQ9Y421 112 aaKnown RBP12.11□□□□□ -0.47
SPTBN1-202ENST00000356805 ABCB11O95342 1321 aa12.11□□□□□ -0.47
SPTBN1-202ENST00000356805 CCDC78A2IDD5 438 aa12.11□□□□□ -0.47
SPTBN1-202ENST00000356805 CYTH3O43739 400 aa12.11□□□□□ -0.47
SPTBN1-202ENST00000356805 ALDH18A1P54886 795 aaKnown RBP12.11□□□□□ -0.47
SPTBN1-202ENST00000356805 ERFEQ4G0M1 354 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms