RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 C2CD2LO14523 706 aa14.1□□□□□ -0.15
IFT88-202ENST00000351808 TTC4O95801 387 aa14.1□□□□□ -0.15
IFT88-202ENST00000351808 POTEIP0CG38 1075 aa14.1□□□□□ -0.15
IFT88-202ENST00000351808 GTF2H1P32780 548 aa14.1□□□□□ -0.15
IFT88-202ENST00000351808 MTTPP55157 894 aa14.1□□□□□ -0.15
IFT88-202ENST00000351808 DCTN2Q13561 401 aaKnown RBP14.1□□□□□ -0.15
IFT88-202ENST00000351808 GRAMD4Q6IC98 578 aa14.1□□□□□ -0.15
IFT88-202ENST00000351808 KLHL35Q6PF15 583 aa14.1□□□□□ -0.15
IFT88-202ENST00000351808 POTEEQ6S8J3 1075 aa14.1□□□□□ -0.15
IFT88-202ENST00000351808 TREML1Q86YW5 311 aa14.1□□□□□ -0.15
IFT88-202ENST00000351808 ANKRD35Q8N283 1001 aa14.1□□□□□ -0.15
IFT88-202ENST00000351808 TTLL11Q8NHH1 800 aa14.1□□□□□ -0.15
IFT88-202ENST00000351808 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.1□□□□□ -0.15
IFT88-202ENST00000351808 DIS3LQ8TF46 1054 aaKnown RBP14.1□□□□□ -0.15
IFT88-202ENST00000351808 SDR42E1Q8WUS8 393 aa14.1□□□□□ -0.15
IFT88-202ENST00000351808 PTCD3Q96EY7 689 aaKnown RBP14.1□□□□□ -0.15
IFT88-202ENST00000351808 PRR11Q96HE9 360 aaPredicted RBP14.1□□□□□ -0.15
IFT88-202ENST00000351808 NSL1Q96IY1 281 aa14.1□□□□□ -0.15
IFT88-202ENST00000351808 FAM161BQ96MY7 647 aa14.1□□□□□ -0.15
IFT88-202ENST00000351808 USP29Q9HBJ7 922 aa14.1□□□□□ -0.15
IFT88-202ENST00000351808 RIC8AQ9NPQ8 531 aa14.1□□□□□ -0.15
IFT88-202ENST00000351808 PCDHA4Q9UN74 947 aa14.1□□□□□ -0.15
IFT88-202ENST00000351808 CCDC88AQ3V6T2 1871 aa14.1□□□□□ -0.15
IFT88-202ENST00000351808 IRS4O14654 1257 aaPredicted RBP14.1□□□□□ -0.15
IFT88-202ENST00000351808 YY1P25490 414 aa14.1□□□□□ -0.15
IFT88-202ENST00000351808 PPATQ06203 517 aa14.1□□□□□ -0.15
IFT88-202ENST00000351808 KCNH2Q12809 1159 aa14.1□□□□□ -0.15
IFT88-202ENST00000351808 TMED2Q15363 201 aa14.1□□□□□ -0.15
IFT88-202ENST00000351808 EAPPQ56P03 285 aaPredicted RBP14.1□□□□□ -0.15
IFT88-202ENST00000351808 TMEM53Q6P2H8 277 aa14.1□□□□□ -0.15
IFT88-202ENST00000351808 POLR3CQ9BUI4 534 aaPredicted RBP14.1□□□□□ -0.15
IFT88-202ENST00000351808 BLOC1S4Q9NUP1 217 aa14.1□□□□□ -0.15
IFT88-202ENST00000351808 NDE1Q9NXR1 346 aa14.1□□□□□ -0.15
IFT88-202ENST00000351808 NENFQ9UMX5 172 aa14.1□□□□□ -0.15
IFT88-202ENST00000351808 PVALEFA0A1B0GWK0 134 aa14.09□□□□□ -0.15
IFT88-202ENST00000351808 TCRBV7S2A1N4TA0A589 114 aa14.09□□□□□ -0.15
IFT88-202ENST00000351808 HAUS5O94927 633 aa14.09□□□□□ -0.15
IFT88-202ENST00000351808 CSF1RP07333 972 aa14.09□□□□□ -0.15
IFT88-202ENST00000351808 IDO1P14902 403 aa14.09□□□□□ -0.15
IFT88-202ENST00000351808 CHRNB2P17787 502 aa14.09□□□□□ -0.15
IFT88-202ENST00000351808 PGM1P36871 562 aa14.09□□□□□ -0.15
IFT88-202ENST00000351808 ARFIP2P53365 341 aa14.09□□□□□ -0.15
IFT88-202ENST00000351808 IFIT5Q13325 482 aaKnown RBP14.09□□□□□ -0.15
IFT88-202ENST00000351808 MED21Q13503 144 aa14.09□□□□□ -0.15
IFT88-202ENST00000351808 ITGA9Q13797 1035 aa14.09□□□□□ -0.15
IFT88-202ENST00000351808 SPDYAQ5MJ70 313 aa14.09□□□□□ -0.15
IFT88-202ENST00000351808 LDHAL6AQ6ZMR3 332 aa14.09□□□□□ -0.15
IFT88-202ENST00000351808 RASSF3Q86WH2 238 aa14.09□□□□□ -0.15
IFT88-202ENST00000351808 MYOCDQ8IZQ8 938 aa14.09□□□□□ -0.15
IFT88-202ENST00000351808 PROM2Q8N271 834 aa14.09□□□□□ -0.15
IFT88-202ENST00000351808 RSPH1Q8WYR4 309 aa14.09□□□□□ -0.15
IFT88-202ENST00000351808 PWWP2AQ96N64 755 aa14.09□□□□□ -0.15
IFT88-202ENST00000351808 TBC1D7Q9P0N9 293 aa14.09□□□□□ -0.15
IFT88-202ENST00000351808 CYP2D7A0A087X1C5 515 aa14.09□□□□□ -0.15
IFT88-202ENST00000351808 THAP12O43422 761 aa14.09□□□□□ -0.15
IFT88-202ENST00000351808 CALM1P0DP23 149 aa14.09□□□□□ -0.15
IFT88-202ENST00000351808 CALM2P0DP24 149 aa14.09□□□□□ -0.15
IFT88-202ENST00000351808 CALM3P0DP25 149 aa14.09□□□□□ -0.15
IFT88-202ENST00000351808 ALAS1P13196 640 aa14.09□□□□□ -0.15
IFT88-202ENST00000351808 MARCKSL1P49006 195 aa14.09□□□□□ -0.15
IFT88-202ENST00000351808 SPARCL1Q14515 664 aa14.09□□□□□ -0.15
IFT88-202ENST00000351808 KLHDC10Q6PID8 442 aa14.09□□□□□ -0.15
IFT88-202ENST00000351808 VPS36Q86VN1 386 aa14.09□□□□□ -0.15
IFT88-202ENST00000351808 KRT35Q92764 455 aa14.09□□□□□ -0.15
IFT88-202ENST00000351808 CALML4Q96GE6 196 aa14.09□□□□□ -0.15
IFT88-202ENST00000351808 AK8Q96MA6 479 aa14.09□□□□□ -0.15
IFT88-202ENST00000351808 AGAP3Q96P47 875 aa14.09□□□□□ -0.15
IFT88-202ENST00000351808 PCDHA6Q9UN73 950 aa14.09□□□□□ -0.15
IFT88-202ENST00000351808 PCDHA8Q9Y5H6 950 aa14.09□□□□□ -0.15
IFT88-202ENST00000351808 HTR3EA5X5Y0 456 aa14.08□□□□□ -0.15
IFT88-202ENST00000351808 BTBD19C9JJ37 291 aa14.08□□□□□ -0.15
IFT88-202ENST00000351808 TP73O15350 636 aa14.08□□□□□ -0.15
IFT88-202ENST00000351808 NMT2O60551 498 aa14.08□□□□□ -0.15
IFT88-202ENST00000351808 GAS8O95995 478 aa14.08□□□□□ -0.15
IFT88-202ENST00000351808 OR52Z1P0C646 297 aa14.08□□□□□ -0.15
IFT88-202ENST00000351808 FGFR1P11362 822 aa14.08□□□□□ -0.15
IFT88-202ENST00000351808 CETN2P41208 172 aa14.08□□□□□ -0.15
IFT88-202ENST00000351808 OVGP1Q12889 678 aa14.08□□□□□ -0.15
IFT88-202ENST00000351808 LLGL1Q15334 1064 aa14.08□□□□□ -0.15
IFT88-202ENST00000351808 ISLR2Q6UXK2 745 aa14.08□□□□□ -0.15
IFT88-202ENST00000351808 RAPH1Q70E73 1250 aa14.08□□□□□ -0.15
IFT88-202ENST00000351808 TRIM50Q86XT4 487 aa14.08□□□□□ -0.15
IFT88-202ENST00000351808 CCDC65Q8IXS2 484 aa14.08□□□□□ -0.15
IFT88-202ENST00000351808 ATP11CQ8NB49 1132 aa14.08□□□□□ -0.15
IFT88-202ENST00000351808 PRPF31Q8WWY3 499 aaKnown RBP14.08□□□□□ -0.15
IFT88-202ENST00000351808 SETDB2Q96T68 719 aa14.08□□□□□ -0.15
IFT88-202ENST00000351808 EMILIN3Q9NT22 766 aa14.08□□□□□ -0.15
IFT88-202ENST00000351808 NDUFA13Q9P0J0 144 aa14.08□□□□□ -0.15
IFT88-202ENST00000351808 KANSL3Q9P2N6 904 aa14.08□□□□□ -0.15
IFT88-202ENST00000351808 HEY2Q9UBP5 337 aa14.08□□□□□ -0.15
IFT88-202ENST00000351808 AJAP1Q9UKB5 411 aaPredicted RBP14.08□□□□□ -0.15
IFT88-202ENST00000351808 HEY1Q9Y5J3 304 aa14.08□□□□□ -0.15
IFT88-202ENST00000351808 A8MXQ7 604 aa14.08□□□□□ -0.16
IFT88-202ENST00000351808 CDH16O75309 829 aa14.08□□□□□ -0.16
IFT88-202ENST00000351808 STK10O94804 968 aaKnown RBP14.08□□□□□ -0.16
IFT88-202ENST00000351808 PORP16435 677 aaPredicted RBP14.08□□□□□ -0.16
IFT88-202ENST00000351808 MUTP22033 750 aa14.08□□□□□ -0.16
IFT88-202ENST00000351808 COILP38432 576 aaPredicted RBP14.08□□□□□ -0.16
IFT88-202ENST00000351808 CPA2P48052 419 aa14.08□□□□□ -0.16
IFT88-202ENST00000351808 MAP7D1Q3KQU3 841 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms