RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 NETO2Q8NC67 525 aa14.26□□□□□ -0.13
CASC4-202ENST00000345795 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.26□□□□□ -0.13
CASC4-202ENST00000345795 FAM49BQ9NUQ9 324 aa14.26□□□□□ -0.13
CASC4-202ENST00000345795 HPCAL4Q9UM19 191 aa14.26□□□□□ -0.13
CASC4-202ENST00000345795 UBR2Q8IWV8 1755 aa14.26□□□□□ -0.13
CASC4-202ENST00000345795 NHSL1Q5SYE7 1610 aa14.26□□□□□ -0.13
CASC4-202ENST00000345795 CTSHP09668 335 aa14.26□□□□□ -0.13
CASC4-202ENST00000345795 HIRAP54198 1017 aaPredicted RBP14.26□□□□□ -0.13
CASC4-202ENST00000345795 ZCWPW2Q504Y3 356 aa14.26□□□□□ -0.13
CASC4-202ENST00000345795 PPP6R3Q5H9R7 873 aaPredicted RBP14.26□□□□□ -0.13
CASC4-202ENST00000345795 MDM1Q8TC05 714 aa14.26□□□□□ -0.13
CASC4-202ENST00000345795 CLEC4DQ8WXI8 215 aa14.26□□□□□ -0.13
CASC4-202ENST00000345795 RFFLQ8WZ73 363 aa14.26□□□□□ -0.13
CASC4-202ENST00000345795 HEXIM2Q96MH2 286 aaKnown RBP14.26□□□□□ -0.13
CASC4-202ENST00000345795 FMO2Q99518 471 aa14.26□□□□□ -0.13
CASC4-202ENST00000345795 MMP19Q99542 508 aa14.26□□□□□ -0.13
CASC4-202ENST00000345795 GANQ9H2C0 597 aa14.26□□□□□ -0.13
CASC4-202ENST00000345795 NGRNQ9NPE2 291 aaKnown RBP14.26□□□□□ -0.13
CASC4-202ENST00000345795 MTRF1LQ9UGC7 380 aaKnown RBP14.26□□□□□ -0.13
CASC4-202ENST00000345795 HES2Q9Y543 173 aa14.26□□□□□ -0.13
CASC4-202ENST00000345795 CNTNAP1P78357 1384 aa14.26□□□□□ -0.13
CASC4-202ENST00000345795 A0A1W2PQJ5 194 aa14.25□□□□□ -0.13
CASC4-202ENST00000345795 FOXO6A8MYZ6 492 aa14.25□□□□□ -0.13
CASC4-202ENST00000345795 LIN9Q5TKA1 542 aa14.25□□□□□ -0.13
CASC4-202ENST00000345795 NOP9Q86U38 636 aaKnown RBP14.25□□□□□ -0.13
CASC4-202ENST00000345795 APOBEC3FQ8IUX4 373 aaKnown RBP14.25□□□□□ -0.13
CASC4-202ENST00000345795 EMC1Q8N766 993 aa14.25□□□□□ -0.13
CASC4-202ENST00000345795 FAM71BQ8TC56 605 aa14.25□□□□□ -0.13
CASC4-202ENST00000345795 PSPC1Q8WXF1 523 aaKnown RBP14.25□□□□□ -0.13
CASC4-202ENST00000345795 RPGRIP1Q96KN7 1286 aa14.25□□□□□ -0.13
CASC4-202ENST00000345795 TSKSQ9UJT2 592 aa14.25□□□□□ -0.13
CASC4-202ENST00000345795 ODF2LQ9ULJ1 636 aa14.25□□□□□ -0.13
CASC4-202ENST00000345795 TRAF3IP3Q9Y228 551 aa14.25□□□□□ -0.13
CASC4-202ENST00000345795 STK24Q9Y6E0 443 aa14.25□□□□□ -0.13
CASC4-202ENST00000345795 AHDC1Q5TGY3 1603 aaPredicted RBP14.25□□□□□ -0.13
CASC4-202ENST00000345795 WDR91A4D1P6 747 aa14.25□□□□□ -0.13
CASC4-202ENST00000345795 PPP2R5CQ13362 524 aa14.25□□□□□ -0.13
CASC4-202ENST00000345795 KIZQ2M2Z5 673 aa14.25□□□□□ -0.13
CASC4-202ENST00000345795 ATP13A4Q4VNC1 1196 aa14.25□□□□□ -0.13
CASC4-202ENST00000345795 IRF2BP2Q7Z5L9 587 aa14.25□□□□□ -0.13
CASC4-202ENST00000345795 MCPH1Q8NEM0 835 aa14.25□□□□□ -0.13
CASC4-202ENST00000345795 UBA3Q8TBC4 463 aa14.25□□□□□ -0.13
CASC4-202ENST00000345795 LENG1Q96BZ8 264 aaPredicted RBP14.25□□□□□ -0.13
CASC4-202ENST00000345795 DYNC1LI2O43237 492 aaPredicted RBP14.25□□□□□ -0.13
CASC4-202ENST00000345795 B4GALT5O43286 388 aa14.25□□□□□ -0.13
CASC4-202ENST00000345795 AMPD2Q01433 879 aa14.25□□□□□ -0.13
CASC4-202ENST00000345795 PAPD7Q5XG87 772 aaKnown RBP14.25□□□□□ -0.13
CASC4-202ENST00000345795 HOOK3Q86VS8 718 aa14.25□□□□□ -0.13
CASC4-202ENST00000345795 C9orf72Q96LT7 481 aa14.25□□□□□ -0.13
CASC4-202ENST00000345795 MPHOSPH6Q99547 160 aaKnown RBP14.25□□□□□ -0.13
CASC4-202ENST00000345795 PLVAPQ9BX97 442 aa14.25□□□□□ -0.13
CASC4-202ENST00000345795 CYP39A1Q9NYL5 469 aa14.25□□□□□ -0.13
CASC4-202ENST00000345795 SUCLA2Q9P2R7 463 aaPredicted RBP14.25□□□□□ -0.13
CASC4-202ENST00000345795 SAE1Q9UBE0 346 aaPredicted RBP14.25□□□□□ -0.13
CASC4-202ENST00000345795 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.25□□□□□ -0.13
CASC4-202ENST00000345795 TNRC6CQ9HCJ0 1690 aaKnown RBP14.24□□□□□ -0.13
CASC4-202ENST00000345795 SGK1O00141 431 aa14.24□□□□□ -0.13
CASC4-202ENST00000345795 TLR3O15455 904 aaKnown RBP14.24□□□□□ -0.13
CASC4-202ENST00000345795 DKC1O60832 514 aaKnown RBP eCLIP14.24□□□□□ -0.13
CASC4-202ENST00000345795 DGAT1O75907 488 aa14.24□□□□□ -0.13
CASC4-202ENST00000345795 PDGFRBP09619 1106 aa14.24□□□□□ -0.13
CASC4-202ENST00000345795 YY1P25490 414 aa14.24□□□□□ -0.13
CASC4-202ENST00000345795 CCDC137Q6PK04 289 aaKnown RBP14.24□□□□□ -0.13
CASC4-202ENST00000345795 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.24□□□□□ -0.136e-12■□□□□ 8.7
CASC4-202ENST00000345795 RGS17Q9UGC6 210 aaPredicted RBP14.24□□□□□ -0.13
CASC4-202ENST00000345795 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.24□□□□□ -0.13
CASC4-202ENST00000345795 C4BP0C0L5 1744 aa14.24□□□□□ -0.13
CASC4-202ENST00000345795 KRT1P04264 644 aa14.24□□□□□ -0.13
CASC4-202ENST00000345795 CYP2B6P20813 491 aa14.24□□□□□ -0.13
CASC4-202ENST00000345795 NT5C2P49902 561 aa14.24□□□□□ -0.13
CASC4-202ENST00000345795 MAGOHP61326 146 aaKnown RBP14.24□□□□□ -0.13
CASC4-202ENST00000345795 NCOA4Q13772 614 aa14.24□□□□□ -0.13
CASC4-202ENST00000345795 PCNX4Q63HM2 1172 aa14.24□□□□□ -0.13
CASC4-202ENST00000345795 OPTNQ96CV9 577 aa14.24□□□□□ -0.13
CASC4-202ENST00000345795 SEL1LQ9UBV2 794 aa14.24□□□□□ -0.13
CASC4-202ENST00000345795 ZNF536O15090 1300 aa14.24□□□□□ -0.13
CASC4-202ENST00000345795 DNAH12Q6ZR08 3092 aa14.24□□□□□ -0.13
CASC4-202ENST00000345795 SPDYE16A6NNV3 312 aaPredicted RBP14.24□□□□□ -0.13
CASC4-202ENST00000345795 RGS16O15492 202 aaPredicted RBP14.24□□□□□ -0.13
CASC4-202ENST00000345795 KCNA3P22001 575 aa14.24□□□□□ -0.13
CASC4-202ENST00000345795 CYP3A7P24462 503 aa14.24□□□□□ -0.13
CASC4-202ENST00000345795 SP2Q02086 613 aa14.24□□□□□ -0.13
CASC4-202ENST00000345795 PPFIA1Q13136 1202 aa14.24□□□□□ -0.13
CASC4-202ENST00000345795 ZNF699Q32M78 642 aa14.24□□□□□ -0.13
CASC4-202ENST00000345795 PAN2Q504Q3 1202 aaKnown RBP14.24□□□□□ -0.13
CASC4-202ENST00000345795 XKR3Q5GH77 459 aa14.24□□□□□ -0.13
CASC4-202ENST00000345795 FAM160B1Q5W0V3 765 aa14.24□□□□□ -0.13
CASC4-202ENST00000345795 USP38Q8NB14 1042 aa14.24□□□□□ -0.13
CASC4-202ENST00000345795 OR5B17Q8NGF7 314 aa14.24□□□□□ -0.13
CASC4-202ENST00000345795 ASAP3Q8TDY4 903 aa14.24□□□□□ -0.13
CASC4-202ENST00000345795 OLFML3Q9NRN5 406 aa14.24□□□□□ -0.13
CASC4-202ENST00000345795 DBR1Q9UK59 544 aaKnown RBP14.24□□□□□ -0.13
CASC4-202ENST00000345795 ZRANB2O95218 330 aaKnown RBP eCLIP14.23□□□□□ -0.139e-9■■■□□ 15.7
CASC4-202ENST00000345795 TNNC2P02585 160 aa14.23□□□□□ -0.13
CASC4-202ENST00000345795 SFNP31947 248 aa14.23□□□□□ -0.13
CASC4-202ENST00000345795 IFT88Q13099 833 aa14.23□□□□□ -0.13
CASC4-202ENST00000345795 EFCAB12Q6NXP0 572 aa14.23□□□□□ -0.13
CASC4-202ENST00000345795 ZNF354CQ86Y25 554 aa14.23□□□□□ -0.13
CASC4-202ENST00000345795 C1orf131Q8NDD1 294 aaKnown RBP14.23□□□□□ -0.13
CASC4-202ENST00000345795 CDCA5Q96FF9 252 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms