RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 TUSC3Q13454 348 aa17.64■□□□□ 0.41
ATG4B-201ENST00000344376 KCNC3Q14003 757 aa17.64■□□□□ 0.41
ATG4B-201ENST00000344376 TPRNQ4KMQ1 711 aa17.64■□□□□ 0.41
ATG4B-201ENST00000344376 PPFIBP1Q86W92 1011 aa17.64■□□□□ 0.41
ATG4B-201ENST00000344376 LARP4BQ92615 738 aaKnown RBP17.64■□□□□ 0.41
ATG4B-201ENST00000344376 ZNF396Q96N95 335 aaPredicted RBP17.64■□□□□ 0.41
ATG4B-201ENST00000344376 REEP2Q9BRK0 252 aa17.64■□□□□ 0.41
ATG4B-201ENST00000344376 TCHPQ9BT92 498 aa17.64■□□□□ 0.41
ATG4B-201ENST00000344376 CCDC94Q9BW85 323 aaPredicted RBP17.64■□□□□ 0.41
ATG4B-201ENST00000344376 TARS2Q9BW92 718 aaKnown RBP17.64■□□□□ 0.41
ATG4B-201ENST00000344376 TOPORSQ9NS56 1045 aaPredicted RBP17.64■□□□□ 0.41
ATG4B-201ENST00000344376 BLOC1S4Q9NUP1 217 aa17.64■□□□□ 0.41
ATG4B-201ENST00000344376 USP15Q9Y4E8 981 aaPredicted RBP17.64■□□□□ 0.41
ATG4B-201ENST00000344376 MORC2Q9Y6X9 1032 aaPredicted RBP17.64■□□□□ 0.41
ATG4B-201ENST00000344376 NPHP3-ACAD11A0A0J9YXS1 232 aa17.63■□□□□ 0.41
ATG4B-201ENST00000344376 TBCAO75347 108 aaKnown RBP17.63■□□□□ 0.41
ATG4B-201ENST00000344376 SCP2P22307 547 aa17.63■□□□□ 0.41
ATG4B-201ENST00000344376 CACNB1Q02641 598 aaPredicted RBP17.63■□□□□ 0.41
ATG4B-201ENST00000344376 ZP2Q05996 745 aa17.63■□□□□ 0.41
ATG4B-201ENST00000344376 MCM6Q14566 821 aa17.63■□□□□ 0.41
ATG4B-201ENST00000344376 SLC39A14Q15043 492 aa17.63■□□□□ 0.41
ATG4B-201ENST00000344376 STK38Q15208 465 aa17.63■□□□□ 0.41
ATG4B-201ENST00000344376 ARSHQ5FYA8 562 aa17.63■□□□□ 0.41
ATG4B-201ENST00000344376 KIAA1841Q6NSI8 718 aa17.63■□□□□ 0.41
ATG4B-201ENST00000344376 TAS1R3Q7RTX0 852 aa17.63■□□□□ 0.41
ATG4B-201ENST00000344376 KRI1Q8N9T8 703 aaKnown RBP17.63■□□□□ 0.41
ATG4B-201ENST00000344376 TMEM161BQ8NDZ6 487 aa17.63■□□□□ 0.41
ATG4B-201ENST00000344376 EPSTI1Q96J88 318 aa17.63■□□□□ 0.41
ATG4B-201ENST00000344376 USP28Q96RU2 1077 aa17.63■□□□□ 0.41
ATG4B-201ENST00000344376 CDT1Q9H211 546 aa17.63■□□□□ 0.41
ATG4B-201ENST00000344376 DZANK1Q9NVP4 752 aa17.63■□□□□ 0.41
ATG4B-201ENST00000344376 STK17AQ9UEE5 414 aa17.63■□□□□ 0.41
ATG4B-201ENST00000344376 MAPTP10636 758 aaKnown RBP17.62■□□□□ 0.41
ATG4B-201ENST00000344376 MCF2P10911 925 aa17.62■□□□□ 0.41
ATG4B-201ENST00000344376 GRM5P41594 1212 aa17.62■□□□□ 0.41
ATG4B-201ENST00000344376 GLUD2P49448 558 aa17.62■□□□□ 0.41
ATG4B-201ENST00000344376 HSP90AA2PQ14568 343 aaPredicted RBP17.62■□□□□ 0.41
ATG4B-201ENST00000344376 SPECC1Q5M775 1068 aa17.62■□□□□ 0.41
ATG4B-201ENST00000344376 MPZL3Q6UWV2 235 aa17.62■□□□□ 0.41
ATG4B-201ENST00000344376 MYCT1Q8N699 235 aa17.62■□□□□ 0.41
ATG4B-201ENST00000344376 PARVGQ9HBI0 331 aa17.62■□□□□ 0.41
ATG4B-201ENST00000344376 PTPRHQ9HD43 1115 aa17.62■□□□□ 0.41
ATG4B-201ENST00000344376 ADAM28Q9UKQ2 775 aa17.62■□□□□ 0.41
ATG4B-201ENST00000344376 BDP1A6H8Y1 2624 aa17.62■□□□□ 0.41
ATG4B-201ENST00000344376 NCOR1O75376 2440 aa17.62■□□□□ 0.41
ATG4B-201ENST00000344376 PTGESO14684 152 aa17.62■□□□□ 0.41
ATG4B-201ENST00000344376 TADA2AO75478 443 aa17.62■□□□□ 0.41
ATG4B-201ENST00000344376 TOM1L1O75674 476 aa17.62■□□□□ 0.41
ATG4B-201ENST00000344376 KLRC2P26717 231 aa17.62■□□□□ 0.41
ATG4B-201ENST00000344376 DDIT3P35638 169 aa17.62■□□□□ 0.41
ATG4B-201ENST00000344376 NASPP49321 788 aaPredicted RBP17.62■□□□□ 0.41
ATG4B-201ENST00000344376 RRAGBQ5VZM2 374 aa17.62■□□□□ 0.41
ATG4B-201ENST00000344376 FUT10Q6P4F1 479 aa17.62■□□□□ 0.41
ATG4B-201ENST00000344376 ZPBP2Q6X784 338 aa17.62■□□□□ 0.41
ATG4B-201ENST00000344376 ZBTB33Q86T24 672 aa17.62■□□□□ 0.41
ATG4B-201ENST00000344376 BICD1Q96G01 975 aa17.62■□□□□ 0.41
ATG4B-201ENST00000344376 CLIC6Q96NY7 704 aa17.62■□□□□ 0.41
ATG4B-201ENST00000344376 ZHX3Q9H4I2 956 aa17.62■□□□□ 0.41
ATG4B-201ENST00000344376 ANKFY1Q9P2R3 1169 aa17.62■□□□□ 0.41
ATG4B-201ENST00000344376 SF3B1O75533 1304 aaKnown RBP eCLIP17.61■□□□□ 0.417e-7■■■■□ 20.8
ATG4B-201ENST00000344376 CASTOR2A6NHX0 329 aa17.61■□□□□ 0.41
ATG4B-201ENST00000344376 SPDYE4A6NLX3 237 aa17.61■□□□□ 0.41
ATG4B-201ENST00000344376 K7ENM7 598 aa17.61■□□□□ 0.41
ATG4B-201ENST00000344376 C2CD2LO14523 706 aa17.61■□□□□ 0.41
ATG4B-201ENST00000344376 HARSP12081 509 aaKnown RBP17.61■□□□□ 0.41
ATG4B-201ENST00000344376 PROZP22891 400 aa17.61■□□□□ 0.41
ATG4B-201ENST00000344376 ABCD1P33897 745 aa17.61■□□□□ 0.41
ATG4B-201ENST00000344376 MATR3P43243 847 aaKnown RBP eCLIP17.61■□□□□ 0.415e-10■■□□□ 12.9
ATG4B-201ENST00000344376 NCKAP1LP55160 1127 aa17.61■□□□□ 0.41
ATG4B-201ENST00000344376 NOLC1Q14978 699 aaKnown RBP eCLIP17.61■□□□□ 0.41
ATG4B-201ENST00000344376 CES5AQ6NT32 575 aa17.61■□□□□ 0.41
ATG4B-201ENST00000344376 CCDC73Q6ZRK6 1079 aa17.61■□□□□ 0.41
ATG4B-201ENST00000344376 USP49Q70CQ1 688 aa17.61■□□□□ 0.41
ATG4B-201ENST00000344376 HAUS6Q7Z4H7 955 aa17.61■□□□□ 0.41
ATG4B-201ENST00000344376 LRRC15Q8TF66 581 aa17.61■□□□□ 0.41
ATG4B-201ENST00000344376 KLHL5Q96PQ7 755 aa17.61■□□□□ 0.41
ATG4B-201ENST00000344376 C1QTNF1Q9BXJ1 281 aa17.61■□□□□ 0.41
ATG4B-201ENST00000344376 CD320Q9NPF0 282 aa17.61■□□□□ 0.41
ATG4B-201ENST00000344376 C19orf67A6NJJ6 358 aa17.6■□□□□ 0.41
ATG4B-201ENST00000344376 BRD1O95696 1058 aa17.6■□□□□ 0.41
ATG4B-201ENST00000344376 ADH1AP07327 375 aa17.6■□□□□ 0.41
ATG4B-201ENST00000344376 ZNF131P52739 623 aa17.6■□□□□ 0.41
ATG4B-201ENST00000344376 OSTNP61366 133 aa17.6■□□□□ 0.41
ATG4B-201ENST00000344376 DSG1Q02413 1049 aa17.6■□□□□ 0.41
ATG4B-201ENST00000344376 ITIH3Q06033 890 aa17.6■□□□□ 0.41
ATG4B-201ENST00000344376 USP41Q3LFD5 358 aa17.6■□□□□ 0.41
ATG4B-201ENST00000344376 SYCE2Q6PIF2 218 aa17.6■□□□□ 0.41
ATG4B-201ENST00000344376 ELMSAN1Q6PJG2 1045 aa17.6■□□□□ 0.41
ATG4B-201ENST00000344376 RNF168Q8IYW5 571 aaPredicted RBP17.6■□□□□ 0.41
ATG4B-201ENST00000344376 SUSD6Q92537 303 aa17.6■□□□□ 0.41
ATG4B-201ENST00000344376 ACAP3Q96P50 834 aa17.6■□□□□ 0.41
ATG4B-201ENST00000344376 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.6■□□□□ 0.41
ATG4B-201ENST00000344376 TDRD15B5MCY1 1934 aaKnown RBP17.6■□□□□ 0.41
ATG4B-201ENST00000344376 F8W810 466 aa17.59■□□□□ 0.41
ATG4B-201ENST00000344376 TRAK2O60296 914 aa17.59■□□□□ 0.41
ATG4B-201ENST00000344376 CNPP09543 421 aaKnown RBP17.59■□□□□ 0.41
ATG4B-201ENST00000344376 ZSCAN22P10073 491 aaPredicted RBP17.59■□□□□ 0.41
ATG4B-201ENST00000344376 EPCAMP16422 314 aa17.59■□□□□ 0.41
ATG4B-201ENST00000344376 CREMQ03060 361 aa17.59■□□□□ 0.41
ATG4B-201ENST00000344376 ELAVL2Q12926 359 aaKnown RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms