RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 BMT2Q1RMZ1 405 aa20.48■□□□□ 0.87
CDHR4-201ENST00000343366 KLHL40Q2TBA0 621 aa20.48■□□□□ 0.87
CDHR4-201ENST00000343366 TIGD5Q53EQ6 642 aa20.48■□□□□ 0.87
CDHR4-201ENST00000343366 ZNF658Q5TYW1 1059 aaPredicted RBP20.48■□□□□ 0.87
CDHR4-201ENST00000343366 FAM117BQ6P1L5 589 aa20.48■□□□□ 0.87
CDHR4-201ENST00000343366 EPM2AIP1Q7L775 607 aaPredicted RBP20.48■□□□□ 0.87
CDHR4-201ENST00000343366 SYCP3Q8IZU3 236 aa20.48■□□□□ 0.87
CDHR4-201ENST00000343366 ACO2Q99798 780 aaKnown RBP20.48■□□□□ 0.87
CDHR4-201ENST00000343366 TRIM6Q9C030 488 aaPredicted RBP20.48■□□□□ 0.87
CDHR4-201ENST00000343366 TMX1Q9H3N1 280 aa20.48■□□□□ 0.87
CDHR4-201ENST00000343366 TBC1D7Q9P0N9 293 aa20.48■□□□□ 0.87
CDHR4-201ENST00000343366 A0A0U1RQF3 1178 aa20.47■□□□□ 0.87
CDHR4-201ENST00000343366 ENPP3O14638 875 aa20.47■□□□□ 0.87
CDHR4-201ENST00000343366 HNRNPDLO14979 420 aaKnown RBP20.47■□□□□ 0.87
CDHR4-201ENST00000343366 KIAA0391O15091 583 aaKnown RBP20.47■□□□□ 0.87
CDHR4-201ENST00000343366 ZNF623O75123 536 aa20.47■□□□□ 0.87
CDHR4-201ENST00000343366 LINC00271P0C7V0 271 aa20.47■□□□□ 0.87
CDHR4-201ENST00000343366 LTBRP36941 435 aa20.47■□□□□ 0.87
CDHR4-201ENST00000343366 STIM1Q13586 685 aa20.47■□□□□ 0.87
CDHR4-201ENST00000343366 CAMK4Q16566 473 aa20.47■□□□□ 0.87
CDHR4-201ENST00000343366 TCEAL5Q5H9L2 206 aa20.47■□□□□ 0.87
CDHR4-201ENST00000343366 CCDC183Q5T5S1 534 aa20.47■□□□□ 0.87
CDHR4-201ENST00000343366 TAS1R3Q7RTX0 852 aa20.47■□□□□ 0.87
CDHR4-201ENST00000343366 GOLGA5Q8TBA6 731 aa20.47■□□□□ 0.87
CDHR4-201ENST00000343366 PGBD4Q96DM1 585 aa20.47■□□□□ 0.87
CDHR4-201ENST00000343366 SAMD11Q96NU1 681 aa20.47■□□□□ 0.87
CDHR4-201ENST00000343366 OSBPL7Q9BZF2 842 aa20.47■□□□□ 0.87
CDHR4-201ENST00000343366 SLC39A2Q9NP94 309 aa20.47■□□□□ 0.87
CDHR4-201ENST00000343366 UBN1Q9NPG3 1134 aa20.47■□□□□ 0.87
CDHR4-201ENST00000343366 CLDN3O15551 220 aa20.46■□□□□ 0.87
CDHR4-201ENST00000343366 HOXA2O43364 376 aa20.46■□□□□ 0.87
CDHR4-201ENST00000343366 LETM1O95202 739 aaPredicted RBP20.46■□□□□ 0.87
CDHR4-201ENST00000343366 FAM189BP81408 668 aa20.46■□□□□ 0.87
CDHR4-201ENST00000343366 STK4Q13043 487 aa20.46■□□□□ 0.87
CDHR4-201ENST00000343366 CTC1Q2NKJ3 1217 aa20.46■□□□□ 0.87
CDHR4-201ENST00000343366 ZC2HC1CQ53FD0 456 aaPredicted RBP20.46■□□□□ 0.87
CDHR4-201ENST00000343366 MPZL3Q6UWV2 235 aa20.46■□□□□ 0.87
CDHR4-201ENST00000343366 HFE2Q6ZVN8 426 aa20.46■□□□□ 0.87
CDHR4-201ENST00000343366 ADHFE1Q8IWW8 467 aa20.46■□□□□ 0.87
CDHR4-201ENST00000343366 MYOCDQ8IZQ8 938 aa20.46■□□□□ 0.87
CDHR4-201ENST00000343366 GUF1Q8N442 669 aaKnown RBP20.46■□□□□ 0.87
CDHR4-201ENST00000343366 FAM105AQ9NUU6 356 aa20.46■□□□□ 0.87
CDHR4-201ENST00000343366 TTC3P53804 2025 aa20.45■□□□□ 0.86
CDHR4-201ENST00000343366 C9IYK1 514 aa20.45■□□□□ 0.86
CDHR4-201ENST00000343366 MYBP10242 640 aa20.45■□□□□ 0.86
CDHR4-201ENST00000343366 MCF2P10911 925 aa20.45■□□□□ 0.86
CDHR4-201ENST00000343366 PTPROQ16827 1216 aa20.45■□□□□ 0.86
CDHR4-201ENST00000343366 KNOP1Q1ED39 458 aaKnown RBP20.45■□□□□ 0.86
CDHR4-201ENST00000343366 HS2ST1Q7LGA3 356 aa20.45■□□□□ 0.86
CDHR4-201ENST00000343366 NPAS4Q8IUM7 802 aa20.45■□□□□ 0.86
CDHR4-201ENST00000343366 TOP1MTQ969P6 601 aa20.45■□□□□ 0.86
CDHR4-201ENST00000343366 CPB2Q96IY4 423 aa20.45■□□□□ 0.86
CDHR4-201ENST00000343366 SNX27Q96L92 541 aa20.45■□□□□ 0.86
CDHR4-201ENST00000343366 TCHPQ9BT92 498 aa20.45■□□□□ 0.86
CDHR4-201ENST00000343366 TARS2Q9BW92 718 aaKnown RBP20.45■□□□□ 0.86
CDHR4-201ENST00000343366 GBP3Q9H0R5 595 aa20.45■□□□□ 0.86
CDHR4-201ENST00000343366 PDZD7Q9H5P4 517 aa20.45■□□□□ 0.86
CDHR4-201ENST00000343366 TMEM161AQ9NX61 479 aa20.45■□□□□ 0.86
CDHR4-201ENST00000343366 LRFN2Q9ULH4 789 aa20.45■□□□□ 0.86
CDHR4-201ENST00000343366 PCDHB7Q9Y5E2 793 aa20.45■□□□□ 0.86
CDHR4-201ENST00000343366 ZMYM2Q9UBW7 1377 aa20.45■□□□□ 0.86
CDHR4-201ENST00000343366 B4GALT5O43286 388 aa20.44■□□□□ 0.86
CDHR4-201ENST00000343366 LDHAP00338 332 aaKnown RBP20.44■□□□□ 0.86
CDHR4-201ENST00000343366 PROZP22891 400 aa20.44■□□□□ 0.86
CDHR4-201ENST00000343366 IRS1P35568 1242 aa20.44■□□□□ 0.86
CDHR4-201ENST00000343366 CASP5P51878 434 aa20.44■□□□□ 0.86
CDHR4-201ENST00000343366 POU5F1Q01860 360 aaKnown RBP20.44■□□□□ 0.86
CDHR4-201ENST00000343366 MCL1Q07820 350 aa20.44■□□□□ 0.86
CDHR4-201ENST00000343366 RTN4RL1Q86UN2 441 aaPredicted RBP20.44■□□□□ 0.86
CDHR4-201ENST00000343366 KIAA0895Q8NCT3 520 aa20.44■□□□□ 0.86
CDHR4-201ENST00000343366 SCFD1Q8WVM8 642 aa20.44■□□□□ 0.86
CDHR4-201ENST00000343366 NSUN3Q9H649 340 aaKnown RBP20.44■□□□□ 0.86
CDHR4-201ENST00000343366 PTPRHQ9HD43 1115 aa20.44■□□□□ 0.86
CDHR4-201ENST00000343366 STYXL1Q9Y6J8 313 aa20.44■□□□□ 0.86
CDHR4-201ENST00000343366 KMT2EQ8IZD2 1858 aa20.43■□□□□ 0.86
CDHR4-201ENST00000343366 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.43■□□□□ 0.86
CDHR4-201ENST00000343366 MGEA5O60502 916 aa20.43■□□□□ 0.86
CDHR4-201ENST00000343366 PRPF6O94906 941 aaKnown RBP20.43■□□□□ 0.86
CDHR4-201ENST00000343366 GARTP22102 1010 aa20.43■□□□□ 0.86
CDHR4-201ENST00000343366 MATR3P43243 847 aaKnown RBP eCLIP20.43■□□□□ 0.86
CDHR4-201ENST00000343366 MORC3Q14149 939 aa20.43■□□□□ 0.86
CDHR4-201ENST00000343366 NOLC1Q14978 699 aaKnown RBP eCLIP20.43■□□□□ 0.86
CDHR4-201ENST00000343366 ZNF568Q3ZCX4 644 aa20.43■□□□□ 0.86
CDHR4-201ENST00000343366 RBM43Q6ZSC3 357 aaKnown RBP20.43■□□□□ 0.86
CDHR4-201ENST00000343366 MRPL10Q7Z7H8 261 aaKnown RBP20.43■□□□□ 0.86
CDHR4-201ENST00000343366 ECHDC2Q86YB7 292 aa20.43■□□□□ 0.86
CDHR4-201ENST00000343366 TMEM174Q8WUU8 243 aa20.43■□□□□ 0.86
CDHR4-201ENST00000343366 MAN1B1Q9UKM7 699 aa20.43■□□□□ 0.86
CDHR4-201ENST00000343366 PCDHB2Q9Y5E7 798 aa20.43■□□□□ 0.86
CDHR4-201ENST00000343366 MYO15AQ9UKN7 3530 aa20.43■□□□□ 0.86
CDHR4-201ENST00000343366 CACNA1HO95180 2353 aa20.42■□□□□ 0.86
CDHR4-201ENST00000343366 PDXKO00764 312 aa20.42■□□□□ 0.86
CDHR4-201ENST00000343366 GPM6BQ13491 265 aa20.42■□□□□ 0.86
CDHR4-201ENST00000343366 SMAD2Q15796 467 aaKnown RBP20.42■□□□□ 0.86
CDHR4-201ENST00000343366 CT47A1Q5JQC4 288 aaPredicted RBP20.42■□□□□ 0.86
CDHR4-201ENST00000343366 TMEM192Q8IY95 271 aa20.42■□□□□ 0.86
CDHR4-201ENST00000343366 LINC01599Q8WXQ3 324 aa20.42■□□□□ 0.86
CDHR4-201ENST00000343366 HPS3Q969F9 1004 aa20.42■□□□□ 0.86
CDHR4-201ENST00000343366 TYW1Q9NV66 732 aaKnown RBP20.42■□□□□ 0.86
CDHR4-201ENST00000343366 DACH1Q9UI36 760 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms