RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 MST1RQ04912 1400 aa13.23□□□□□ -0.29
SNRNP48-201ENST00000342415 KRT10P13645 584 aa13.23□□□□□ -0.29
SNRNP48-201ENST00000342415 TARSP26639 723 aaKnown RBP13.23□□□□□ -0.29
SNRNP48-201ENST00000342415 ITGB3BPQ13352 177 aaPredicted RBP13.23□□□□□ -0.29
SNRNP48-201ENST00000342415 STAMBPL1Q96FJ0 436 aa13.23□□□□□ -0.29
SNRNP48-201ENST00000342415 TTC1Q99614 292 aa13.23□□□□□ -0.29
SNRNP48-201ENST00000342415 MARCOQ9UEW3 520 aaPredicted RBP13.23□□□□□ -0.29
SNRNP48-201ENST00000342415 BCL9O00512 1426 aa13.23□□□□□ -0.29
SNRNP48-201ENST00000342415 TNS2Q63HR2 1409 aa13.23□□□□□ -0.29
SNRNP48-201ENST00000342415 SPATA31A1Q5TZJ5 1347 aa13.22□□□□□ -0.29
SNRNP48-201ENST00000342415 SLC16A3O15427 465 aaKnown RBP13.22□□□□□ -0.29
SNRNP48-201ENST00000342415 ECE2O60344 883 aa13.22□□□□□ -0.29
SNRNP48-201ENST00000342415 STAMBPO95630 424 aa13.22□□□□□ -0.29
SNRNP48-201ENST00000342415 PYGMP11217 842 aa13.22□□□□□ -0.29
SNRNP48-201ENST00000342415 GNA15P30679 374 aa13.22□□□□□ -0.29
SNRNP48-201ENST00000342415 SOX10P56693 466 aa13.22□□□□□ -0.29
SNRNP48-201ENST00000342415 SKOR1P84550 965 aa13.22□□□□□ -0.29
SNRNP48-201ENST00000342415 PPP6R3Q5H9R7 873 aaPredicted RBP13.22□□□□□ -0.29
SNRNP48-201ENST00000342415 HGSNATQ68CP4 663 aa13.22□□□□□ -0.29
SNRNP48-201ENST00000342415 C7orf31Q8N865 590 aa13.22□□□□□ -0.29
SNRNP48-201ENST00000342415 AGBL1Q96MI9 1066 aa13.22□□□□□ -0.29
SNRNP48-201ENST00000342415 CDC42EP4Q9H3Q1 356 aaKnown RBP13.22□□□□□ -0.29
SNRNP48-201ENST00000342415 TRABDQ9H4I3 376 aa13.22□□□□□ -0.29
SNRNP48-201ENST00000342415 NGRNQ9NPE2 291 aaKnown RBP13.22□□□□□ -0.29
SNRNP48-201ENST00000342415 CTNNAL1Q9UBT7 734 aa13.22□□□□□ -0.29
SNRNP48-201ENST00000342415 SEL1LQ9UBV2 794 aa13.22□□□□□ -0.29
SNRNP48-201ENST00000342415 FOXO6A8MYZ6 492 aa13.22□□□□□ -0.29
SNRNP48-201ENST00000342415 PSMA2P25787 234 aa13.22□□□□□ -0.29
SNRNP48-201ENST00000342415 YWHABP31946 246 aaKnown RBP13.22□□□□□ -0.29
SNRNP48-201ENST00000342415 RPL21P46778 160 aaKnown RBP13.22□□□□□ -0.29
SNRNP48-201ENST00000342415 YARSP54577 528 aaKnown RBP13.22□□□□□ -0.29
SNRNP48-201ENST00000342415 DAB2IPQ5VWQ8 1189 aa13.22□□□□□ -0.29
SNRNP48-201ENST00000342415 PHLDB3Q6NSJ2 640 aa13.22□□□□□ -0.29
SNRNP48-201ENST00000342415 ERICH1Q86X53 443 aa13.22□□□□□ -0.29
SNRNP48-201ENST00000342415 ATP8B4Q8TF62 1192 aa13.22□□□□□ -0.29
SNRNP48-201ENST00000342415 PWWP2AQ96N64 755 aa13.22□□□□□ -0.29
SNRNP48-201ENST00000342415 TTYH3Q9C0H2 523 aa13.22□□□□□ -0.29
SNRNP48-201ENST00000342415 TRPC5Q9UL62 973 aaPredicted RBP13.22□□□□□ -0.29
SNRNP48-201ENST00000342415 CLEC11AQ9Y240 323 aa13.22□□□□□ -0.29
SNRNP48-201ENST00000342415 ARHGAP23Q9P227 1491 aa13.22□□□□□ -0.29
SNRNP48-201ENST00000342415 RPS6KA5O75582 802 aa13.22□□□□□ -0.29
SNRNP48-201ENST00000342415 ANP32DO95626 131 aa13.22□□□□□ -0.29
SNRNP48-201ENST00000342415 NT5C2P49902 561 aa13.22□□□□□ -0.29
SNRNP48-201ENST00000342415 PDE1BQ01064 536 aa13.22□□□□□ -0.29
SNRNP48-201ENST00000342415 EPHA7Q15375 998 aa13.22□□□□□ -0.29
SNRNP48-201ENST00000342415 SMTNL2Q2TAL5 461 aa13.22□□□□□ -0.29
SNRNP48-201ENST00000342415 ANKRD20A8PQ5CZ79 823 aa13.22□□□□□ -0.29
SNRNP48-201ENST00000342415 CAPRIN2Q6IMN6 1127 aaKnown RBP13.22□□□□□ -0.29
SNRNP48-201ENST00000342415 KRT27Q7Z3Y8 459 aa13.22□□□□□ -0.29
SNRNP48-201ENST00000342415 PPM1NQ8N819 430 aa13.22□□□□□ -0.29
SNRNP48-201ENST00000342415 ATL2Q8NHH9 583 aa13.22□□□□□ -0.29
SNRNP48-201ENST00000342415 ZSWIM1Q9BR11 485 aa13.22□□□□□ -0.29
SNRNP48-201ENST00000342415 NEUROG2Q9H2A3 272 aa13.22□□□□□ -0.29
SNRNP48-201ENST00000342415 SMYD3Q9H7B4 428 aa13.22□□□□□ -0.29
SNRNP48-201ENST00000342415 PCDHAC2Q9Y5I4 1007 aa13.22□□□□□ -0.29
SNRNP48-201ENST00000342415 MYH10P35580 1976 aa13.22□□□□□ -0.29
SNRNP48-201ENST00000342415 MAP3K6O95382 1288 aa13.21□□□□□ -0.29
SNRNP48-201ENST00000342415 CPA2P48052 419 aa13.21□□□□□ -0.29
SNRNP48-201ENST00000342415 NOP14P78316 857 aaKnown RBP13.21□□□□□ -0.29
SNRNP48-201ENST00000342415 LRRC36Q1X8D7 754 aa13.21□□□□□ -0.29
SNRNP48-201ENST00000342415 RHPN2Q8IUC4 686 aa13.21□□□□□ -0.29
SNRNP48-201ENST00000342415 FUKQ8N0W3 1084 aa13.21□□□□□ -0.29
SNRNP48-201ENST00000342415 PRCCQ92733 491 aaPredicted RBP13.21□□□□□ -0.29
SNRNP48-201ENST00000342415 SLC5A5Q92911 643 aa13.21□□□□□ -0.29
SNRNP48-201ENST00000342415 UBN1Q9NPG3 1134 aa13.21□□□□□ -0.29
SNRNP48-201ENST00000342415 KCNQ5Q9NR82 932 aa13.21□□□□□ -0.29
SNRNP48-201ENST00000342415 NR2E1Q9Y466 385 aa13.21□□□□□ -0.29
SNRNP48-201ENST00000342415 CDH16O75309 829 aa13.21□□□□□ -0.29
SNRNP48-201ENST00000342415 POLR2BP30876 1174 aaKnown RBP13.21□□□□□ -0.29
SNRNP48-201ENST00000342415 TMPRSS15P98073 1019 aa13.21□□□□□ -0.29
SNRNP48-201ENST00000342415 DRP2Q13474 957 aa13.21□□□□□ -0.29
SNRNP48-201ENST00000342415 TRAPPC3O43617 180 aa13.21□□□□□ -0.3
SNRNP48-201ENST00000342415 TJP3O95049 919 aa13.21□□□□□ -0.3
SNRNP48-201ENST00000342415 SLC20A2Q08357 652 aa13.21□□□□□ -0.3
SNRNP48-201ENST00000342415 TMEM119Q4V9L6 283 aa13.21□□□□□ -0.3
SNRNP48-201ENST00000342415 NXNQ6DKJ4 435 aa13.21□□□□□ -0.3
SNRNP48-201ENST00000342415 RHOT1Q8IXI2 618 aa13.21□□□□□ -0.3
SNRNP48-201ENST00000342415 SREK1Q8WXA9 508 aaKnown RBP13.21□□□□□ -0.3
SNRNP48-201ENST00000342415 NLRP4Q96MN2 994 aa13.21□□□□□ -0.3
SNRNP48-201ENST00000342415 ABCF3Q9NUQ8 709 aa13.21□□□□□ -0.3
SNRNP48-201ENST00000342415 HAO1Q9UJM8 370 aa13.21□□□□□ -0.3
SNRNP48-201ENST00000342415 COL5A2P05997 1499 aaPredicted RBP13.21□□□□□ -0.3
SNRNP48-201ENST00000342415 CHRNA5P30532 468 aa13.21□□□□□ -0.3
SNRNP48-201ENST00000342415 HOXA7P31268 230 aaPredicted RBP13.21□□□□□ -0.3
SNRNP48-201ENST00000342415 RAB3IL1Q8TBN0 382 aa13.21□□□□□ -0.3
SNRNP48-201ENST00000342415 TRIM11Q96F44 468 aa13.21□□□□□ -0.3
SNRNP48-201ENST00000342415 OSBPL8Q9BZF1 889 aa13.21□□□□□ -0.3
SNRNP48-201ENST00000342415 FAM129AQ9BZQ8 928 aa13.21□□□□□ -0.3
SNRNP48-201ENST00000342415 SMYD2Q9NRG4 433 aa13.21□□□□□ -0.3
SNRNP48-201ENST00000342415 COMMD10Q9Y6G5 202 aa13.21□□□□□ -0.3
SNRNP48-201ENST00000342415 PFASO15067 1338 aa13.2□□□□□ -0.3
SNRNP48-201ENST00000342415 MCF2LO15068 1137 aa13.2□□□□□ -0.3
SNRNP48-201ENST00000342415 NOL4O94818 638 aa13.2□□□□□ -0.3
SNRNP48-201ENST00000342415 LUC7L3O95232 432 aaKnown RBP13.2□□□□□ -0.3
SNRNP48-201ENST00000342415 PODNQ7Z5L7 613 aa13.2□□□□□ -0.3
SNRNP48-201ENST00000342415 PRUNE1Q86TP1 453 aa13.2□□□□□ -0.3
SNRNP48-201ENST00000342415 LRRC15Q8TF66 581 aa13.2□□□□□ -0.3
SNRNP48-201ENST00000342415 CNKSR1Q969H4 720 aa13.2□□□□□ -0.3
SNRNP48-201ENST00000342415 NEU2Q9Y3R4 380 aa13.2□□□□□ -0.3
SNRNP48-201ENST00000342415 EPHB1P54762 984 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms