RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 RFX8Q6ZV50 586 aa13.42□□□□□ -0.26
LMX1A-202ENST00000342310 CCDC63Q8NA47 563 aa13.42□□□□□ -0.26
LMX1A-202ENST00000342310 DEPTORQ8TB45 409 aa13.42□□□□□ -0.26
LMX1A-202ENST00000342310 SCFD2Q8WU76 684 aa13.42□□□□□ -0.26
LMX1A-202ENST00000342310 XPO6Q96QU8 1125 aaKnown RBP13.42□□□□□ -0.26
LMX1A-202ENST00000342310 MXRA8Q9BRK3 442 aa13.42□□□□□ -0.26
LMX1A-202ENST00000342310 ADAM22Q9P0K1 906 aa13.42□□□□□ -0.26
LMX1A-202ENST00000342310 SGK1O00141 431 aa13.41□□□□□ -0.26
LMX1A-202ENST00000342310 PSMD10O75832 226 aa13.41□□□□□ -0.26
LMX1A-202ENST00000342310 KCNT1Q5JUK3 1230 aa13.41□□□□□ -0.26
LMX1A-202ENST00000342310 RHOT2Q8IXI1 618 aa13.41□□□□□ -0.26
LMX1A-202ENST00000342310 SLITRK6Q9H5Y7 841 aa13.41□□□□□ -0.26
LMX1A-202ENST00000342310 SLC40A1Q9NP59 571 aa13.41□□□□□ -0.26
LMX1A-202ENST00000342310 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.41□□□□□ -0.26
LMX1A-202ENST00000342310 UPP2O95045 317 aa13.41□□□□□ -0.26
LMX1A-202ENST00000342310 RALAP11233 206 aa13.41□□□□□ -0.26
LMX1A-202ENST00000342310 HOXA10P31260 410 aaPredicted RBP13.41□□□□□ -0.26
LMX1A-202ENST00000342310 CETN2P41208 172 aa13.41□□□□□ -0.26
LMX1A-202ENST00000342310 CDO1Q16878 200 aa13.41□□□□□ -0.26
LMX1A-202ENST00000342310 KRT39Q6A163 491 aa13.41□□□□□ -0.26
LMX1A-202ENST00000342310 PRELID2Q8N945 189 aa13.41□□□□□ -0.26
LMX1A-202ENST00000342310 ZNF526Q8TF50 670 aaPredicted RBP13.41□□□□□ -0.26
LMX1A-202ENST00000342310 POLR3CQ9BUI4 534 aaPredicted RBP13.41□□□□□ -0.26
LMX1A-202ENST00000342310 MTFR1LQ9H019 292 aa13.41□□□□□ -0.26
LMX1A-202ENST00000342310 SAYSD1Q9NPB0 183 aa13.41□□□□□ -0.26
LMX1A-202ENST00000342310 RNF146Q9NTX7 359 aa13.41□□□□□ -0.26
LMX1A-202ENST00000342310 L3MBTL1Q9Y468 752 aa13.41□□□□□ -0.26
LMX1A-202ENST00000342310 ZBED4O75132 1171 aa13.4□□□□□ -0.26
LMX1A-202ENST00000342310 ZBTB7AO95365 584 aa13.4□□□□□ -0.26
LMX1A-202ENST00000342310 IRX4P78413 519 aa13.4□□□□□ -0.26
LMX1A-202ENST00000342310 Q4G0T1 1027 aa13.4□□□□□ -0.26
LMX1A-202ENST00000342310 TTC27Q6P3X3 843 aa13.4□□□□□ -0.26
LMX1A-202ENST00000342310 SV2AQ7L0J3 742 aa13.4□□□□□ -0.26
LMX1A-202ENST00000342310 ANKRD35Q8N283 1001 aa13.4□□□□□ -0.26
LMX1A-202ENST00000342310 FBXL13Q8NEE6 735 aa13.4□□□□□ -0.26
LMX1A-202ENST00000342310 FAM167BQ9BTA0 163 aa13.4□□□□□ -0.26
LMX1A-202ENST00000342310 TMEM206Q9H813 350 aa13.4□□□□□ -0.26
LMX1A-202ENST00000342310 DCTN4Q9UJW0 460 aa13.4□□□□□ -0.26
LMX1A-202ENST00000342310 TMEM120BA0PK00 339 aa13.4□□□□□ -0.26
LMX1A-202ENST00000342310 WEE2P0C1S8 567 aa13.4□□□□□ -0.26
LMX1A-202ENST00000342310 CYP11B1P15538 503 aa13.4□□□□□ -0.26
LMX1A-202ENST00000342310 MYO1EQ12965 1108 aa13.4□□□□□ -0.26
LMX1A-202ENST00000342310 SNCBQ16143 134 aa13.4□□□□□ -0.26
LMX1A-202ENST00000342310 SCYL2Q6P3W7 929 aa13.4□□□□□ -0.26
LMX1A-202ENST00000342310 TARS2Q9BW92 718 aaKnown RBP13.4□□□□□ -0.26
LMX1A-202ENST00000342310 YDJCA8MPS7 323 aa13.4□□□□□ -0.26
LMX1A-202ENST00000342310 TBX3O15119 743 aa13.4□□□□□ -0.26
LMX1A-202ENST00000342310 BANF1O75531 89 aa13.4□□□□□ -0.26
LMX1A-202ENST00000342310 GH1P01241 217 aa13.4□□□□□ -0.26
LMX1A-202ENST00000342310 ETS1P14921 441 aa13.4□□□□□ -0.26
LMX1A-202ENST00000342310 NPTX2P47972 431 aa13.4□□□□□ -0.26
LMX1A-202ENST00000342310 ITGA8P53708 1063 aa13.4□□□□□ -0.26
LMX1A-202ENST00000342310 TKFCQ3LXA3 575 aa13.4□□□□□ -0.26
LMX1A-202ENST00000342310 DAW1Q8N136 415 aa13.4□□□□□ -0.26
LMX1A-202ENST00000342310 CERKQ8TCT0 537 aa13.4□□□□□ -0.26
LMX1A-202ENST00000342310 KLHL29Q96CT2 875 aa13.4□□□□□ -0.26
LMX1A-202ENST00000342310 ZSWIM1Q9BR11 485 aa13.4□□□□□ -0.26
LMX1A-202ENST00000342310 RPAP3Q9H6T3 665 aaPredicted RBP13.4□□□□□ -0.26
LMX1A-202ENST00000342310 TUFT1Q9NNX1 390 aa13.4□□□□□ -0.26
LMX1A-202ENST00000342310 RAB20Q9NX57 234 aa13.4□□□□□ -0.26
LMX1A-202ENST00000342310 ASTN2O75129 1339 aaPredicted RBP13.4□□□□□ -0.26
LMX1A-202ENST00000342310 IGLV3-22A0A075B6J6 115 aa13.39□□□□□ -0.27
LMX1A-202ENST00000342310 RASA4BC9J798 803 aa13.39□□□□□ -0.27
LMX1A-202ENST00000342310 SLC16A3O15427 465 aaKnown RBP13.39□□□□□ -0.27
LMX1A-202ENST00000342310 RASA4O43374 803 aa13.39□□□□□ -0.27
LMX1A-202ENST00000342310 EGFRP00533 1210 aa13.39□□□□□ -0.27
LMX1A-202ENST00000342310 ASNSP08243 561 aa13.39□□□□□ -0.27
LMX1A-202ENST00000342310 ZNF131P52739 623 aa13.39□□□□□ -0.27
LMX1A-202ENST00000342310 ZBTB16Q05516 673 aa13.39□□□□□ -0.27
LMX1A-202ENST00000342310 SEMA3FQ13275 785 aa13.39□□□□□ -0.27
LMX1A-202ENST00000342310 CYP4A22Q5TCH4 519 aa13.39□□□□□ -0.27
LMX1A-202ENST00000342310 ZNF662Q6ZS27 426 aa13.39□□□□□ -0.27
LMX1A-202ENST00000342310 CTAGE3PQ8IX95 158 aa13.39□□□□□ -0.27
LMX1A-202ENST00000342310 PRPF38AQ8NAV1 312 aaKnown RBP13.39□□□□□ -0.27
LMX1A-202ENST00000342310 ZBTB10Q96DT7 871 aa13.39□□□□□ -0.27
LMX1A-202ENST00000342310 OLFML3Q9NRN5 406 aa13.39□□□□□ -0.27
LMX1A-202ENST00000342310 INTUQ9ULD6 942 aa13.39□□□□□ -0.27
LMX1A-202ENST00000342310 EXOC7Q9UPT5 735 aa13.39□□□□□ -0.27
LMX1A-202ENST00000342310 SYNGAP1Q96PV0 1343 aa13.39□□□□□ -0.27
LMX1A-202ENST00000342310 IRS2Q9Y4H2 1338 aa13.39□□□□□ -0.27
LMX1A-202ENST00000342310 TLR3O15455 904 aaKnown RBP13.39□□□□□ -0.27
LMX1A-202ENST00000342310 CHKAP35790 457 aa13.39□□□□□ -0.27
LMX1A-202ENST00000342310 TAOK1Q7L7X3 1001 aa13.39□□□□□ -0.27
LMX1A-202ENST00000342310 SLC13A5Q86YT5 568 aaPredicted RBP13.39□□□□□ -0.27
LMX1A-202ENST00000342310 WNK4Q96J92 1243 aa13.39□□□□□ -0.27
LMX1A-202ENST00000342310 NLRP4Q96MN2 994 aa13.39□□□□□ -0.27
LMX1A-202ENST00000342310 CALN1Q9BXU9 219 aa13.39□□□□□ -0.27
LMX1A-202ENST00000342310 NSRP1Q9H0G5 558 aaKnown RBP13.39□□□□□ -0.27
LMX1A-202ENST00000342310 PABPC3Q9H361 631 aaKnown RBP13.39□□□□□ -0.27
LMX1A-202ENST00000342310 CDC42EP4Q9H3Q1 356 aaKnown RBP13.39□□□□□ -0.27
LMX1A-202ENST00000342310 TRIM33Q9UPN9 1127 aa13.39□□□□□ -0.27
LMX1A-202ENST00000342310 K7ERI5 159 aa13.39□□□□□ -0.27
LMX1A-202ENST00000342310 MYCNP04198 464 aaPredicted RBP13.39□□□□□ -0.27
LMX1A-202ENST00000342310 PLS3P13797 630 aa13.39□□□□□ -0.27
LMX1A-202ENST00000342310 NOP14P78316 857 aaKnown RBP13.39□□□□□ -0.27
LMX1A-202ENST00000342310 SLC20A2Q08357 652 aa13.39□□□□□ -0.27
LMX1A-202ENST00000342310 TRPC3Q13507 836 aa13.39□□□□□ -0.27
LMX1A-202ENST00000342310 EPS8L1Q8TE68 723 aa13.39□□□□□ -0.27
LMX1A-202ENST00000342310 CARD9Q9H257 536 aa13.39□□□□□ -0.27
LMX1A-202ENST00000342310 HOMER3Q9NSC5 361 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms