RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 IFT81Q8WYA0 676 aa13.39□□□□□ -0.27
RNF4-201ENST00000314289 FAM212AQ96EL1 285 aa13.39□□□□□ -0.27
RNF4-201ENST00000314289 DHX33Q9H6R0 707 aaKnown RBP13.39□□□□□ -0.27
RNF4-201ENST00000314289 AGTPBP1Q9UPW5 1226 aa13.39□□□□□ -0.27
RNF4-201ENST00000314289 NOP56O00567 594 aaKnown RBP13.38□□□□□ -0.27
RNF4-201ENST00000314289 CSDE1O75534 798 aaKnown RBP13.38□□□□□ -0.27
RNF4-201ENST00000314289 ATG7O95352 703 aa13.38□□□□□ -0.27
RNF4-201ENST00000314289 COPB2P35606 906 aa13.38□□□□□ -0.27
RNF4-201ENST00000314289 GTF2A1P52655 376 aaPredicted RBP13.38□□□□□ -0.27
RNF4-201ENST00000314289 TUBB4BP68371 445 aa13.38□□□□□ -0.27
RNF4-201ENST00000314289 ZNF211Q13398 564 aaPredicted RBP13.38□□□□□ -0.27
RNF4-201ENST00000314289 KCTD2Q14681 263 aa13.38□□□□□ -0.27
RNF4-201ENST00000314289 BRDTQ58F21 947 aaPredicted RBP13.38□□□□□ -0.27
RNF4-201ENST00000314289 AADACL2Q6P093 401 aa13.38□□□□□ -0.27
RNF4-201ENST00000314289 MMGT1Q8N4V1 131 aa13.38□□□□□ -0.27
RNF4-201ENST00000314289 EPS8L1Q8TE68 723 aa13.38□□□□□ -0.27
RNF4-201ENST00000314289 PRPF31Q8WWY3 499 aaKnown RBP13.38□□□□□ -0.27
RNF4-201ENST00000314289 AGO2Q9UKV8 859 aaKnown RBP13.38□□□□□ -0.27
RNF4-201ENST00000314289 ZNF233A6NK53 670 aa13.38□□□□□ -0.27
RNF4-201ENST00000314289 SOCS7O14512 581 aa13.38□□□□□ -0.27
RNF4-201ENST00000314289 SYF2O95926 243 aaKnown RBP13.38□□□□□ -0.27
RNF4-201ENST00000314289 ITGA4P13612 1032 aa13.38□□□□□ -0.27
RNF4-201ENST00000314289 MOGSQ13724 837 aa13.38□□□□□ -0.27
RNF4-201ENST00000314289 CAPSQ13938 189 aa13.38□□□□□ -0.27
RNF4-201ENST00000314289 HELQQ8TDG4 1101 aa13.38□□□□□ -0.27
RNF4-201ENST00000314289 MMP19Q99542 508 aa13.38□□□□□ -0.27
RNF4-201ENST00000314289 TCHPQ9BT92 498 aa13.38□□□□□ -0.27
RNF4-201ENST00000314289 SELENOOQ9BVL4 669 aa13.38□□□□□ -0.27
RNF4-201ENST00000314289 C17orf75Q9HAS0 396 aa13.38□□□□□ -0.27
RNF4-201ENST00000314289 TMEM8AQ9HCN3 771 aa13.38□□□□□ -0.27
RNF4-201ENST00000314289 CTTNBP2NLQ9P2B4 639 aa13.38□□□□□ -0.27
RNF4-201ENST00000314289 RPS6KA5O75582 802 aa13.38□□□□□ -0.27
RNF4-201ENST00000314289 CHRNB2P17787 502 aa13.38□□□□□ -0.27
RNF4-201ENST00000314289 EDNRBP24530 442 aa13.38□□□□□ -0.27
RNF4-201ENST00000314289 GUCY2DQ02846 1103 aa13.38□□□□□ -0.27
RNF4-201ENST00000314289 CCDC70Q6NSX1 233 aa13.38□□□□□ -0.27
RNF4-201ENST00000314289 MFSD14AQ96MC6 490 aa13.38□□□□□ -0.27
RNF4-201ENST00000314289 FNBP1Q96RU3 617 aa13.38□□□□□ -0.27
RNF4-201ENST00000314289 AZI2Q9H6S1 392 aa13.38□□□□□ -0.27
RNF4-201ENST00000314289 TSKSQ9UJT2 592 aa13.38□□□□□ -0.27
RNF4-201ENST00000314289 TNFSF9P41273 254 aa13.37□□□□□ -0.27
RNF4-201ENST00000314289 OSTNP61366 133 aa13.37□□□□□ -0.27
RNF4-201ENST00000314289 IGBP1P78318 339 aa13.37□□□□□ -0.27
RNF4-201ENST00000314289 SND1Q7KZF4 910 aaKnown RBP eCLIP13.37□□□□□ -0.27
RNF4-201ENST00000314289 NT5DC3Q86UY8 548 aa13.37□□□□□ -0.27
RNF4-201ENST00000314289 TMEM130Q8N3G9 435 aa13.37□□□□□ -0.27
RNF4-201ENST00000314289 SLC17A8Q8NDX2 589 aa13.37□□□□□ -0.27
RNF4-201ENST00000314289 SEPT1Q8WYJ6 367 aa13.37□□□□□ -0.27
RNF4-201ENST00000314289 SPATA33Q96N06 139 aa13.37□□□□□ -0.27
RNF4-201ENST00000314289 NT5C1BQ96P26 610 aa13.37□□□□□ -0.27
RNF4-201ENST00000314289 CEP89Q96ST8 783 aa13.37□□□□□ -0.27
RNF4-201ENST00000314289 EPB41L5Q9HCM4 733 aa13.37□□□□□ -0.27
RNF4-201ENST00000314289 HPCAL4Q9UM19 191 aa13.37□□□□□ -0.27
RNF4-201ENST00000314289 CCDC172P0C7W6 258 aa13.37□□□□□ -0.27
RNF4-201ENST00000314289 MFAP3P55082 362 aa13.37□□□□□ -0.27
RNF4-201ENST00000314289 LLGL2Q6P1M3 1020 aa13.37□□□□□ -0.27
RNF4-201ENST00000314289 METTL7BQ6UX53 244 aa13.37□□□□□ -0.27
RNF4-201ENST00000314289 PPP1R13LQ8WUF5 828 aa13.37□□□□□ -0.27
RNF4-201ENST00000314289 RFFLQ8WZ73 363 aa13.37□□□□□ -0.27
RNF4-201ENST00000314289 FBXL18Q96ME1 805 aa13.37□□□□□ -0.27
RNF4-201ENST00000314289 MSTO1Q9BUK6 570 aa13.37□□□□□ -0.27
RNF4-201ENST00000314289 DDX47Q9H0S4 455 aaKnown RBP13.37□□□□□ -0.27
RNF4-201ENST00000314289 STIM2Q9P246 746 aa13.37□□□□□ -0.27
RNF4-201ENST00000314289 TARSL2A2RTX5 802 aaKnown RBP13.36□□□□□ -0.27
RNF4-201ENST00000314289 HEXIM1O94992 359 aaKnown RBP13.36□□□□□ -0.27
RNF4-201ENST00000314289 TMEM253P0C7T8 217 aa13.36□□□□□ -0.27
RNF4-201ENST00000314289 GGCXP38435 758 aa13.36□□□□□ -0.27
RNF4-201ENST00000314289 CARSP49589 748 aaKnown RBP13.36□□□□□ -0.27
RNF4-201ENST00000314289 NEDD9Q14511 834 aa13.36□□□□□ -0.27
RNF4-201ENST00000314289 ICE2Q659A1 982 aa13.36□□□□□ -0.27
RNF4-201ENST00000314289 GPAT2Q6NUI2 795 aa13.36□□□□□ -0.27
RNF4-201ENST00000314289 CRELD2Q6UXH1 353 aaPredicted RBP13.36□□□□□ -0.27
RNF4-201ENST00000314289 FAM71AQ8IYT1 594 aa13.36□□□□□ -0.27
RNF4-201ENST00000314289 MSL3Q8N5Y2 521 aaKnown RBP13.36□□□□□ -0.27
RNF4-201ENST00000314289 USP38Q8NB14 1042 aa13.36□□□□□ -0.27
RNF4-201ENST00000314289 NOCTQ9UK39 431 aaKnown RBP13.36□□□□□ -0.27
RNF4-201ENST00000314289 NR2E1Q9Y466 385 aa13.36□□□□□ -0.27
RNF4-201ENST00000314289 BTNL10A8MVZ5 291 aa13.36□□□□□ -0.27
RNF4-201ENST00000314289 CXCL11O14625 94 aa13.36□□□□□ -0.27
RNF4-201ENST00000314289 P4HA2O15460 535 aa13.36□□□□□ -0.27
RNF4-201ENST00000314289 CYP11B1P15538 503 aa13.36□□□□□ -0.27
RNF4-201ENST00000314289 ARL2P36404 184 aa13.36□□□□□ -0.27
RNF4-201ENST00000314289 MARCKSL1P49006 195 aa13.36□□□□□ -0.27
RNF4-201ENST00000314289 CORO7P57737 925 aa13.36□□□□□ -0.27
RNF4-201ENST00000314289 MESDQ14696 234 aa13.36□□□□□ -0.27
RNF4-201ENST00000314289 IFI16Q16666 785 aaKnown RBP13.36□□□□□ -0.27
RNF4-201ENST00000314289 MAP9Q49MG5 647 aa13.36□□□□□ -0.27
RNF4-201ENST00000314289 TDRD10Q5VZ19 366 aaKnown RBP13.36□□□□□ -0.27
RNF4-201ENST00000314289 DHX37Q8IY37 1157 aaKnown RBP13.36□□□□□ -0.27
RNF4-201ENST00000314289 OR5B17Q8NGF7 314 aa13.36□□□□□ -0.27
RNF4-201ENST00000314289 NLRP4Q96MN2 994 aa13.36□□□□□ -0.27
RNF4-201ENST00000314289 NRBP2Q9NSY0 501 aa13.36□□□□□ -0.27
RNF4-201ENST00000314289 RBAKQ9NYW8 714 aaPredicted RBP13.36□□□□□ -0.27
RNF4-201ENST00000314289 NFU1Q9UMS0 254 aa13.36□□□□□ -0.27
RNF4-201ENST00000314289 NOC2LQ9Y3T9 749 aaKnown RBP13.36□□□□□ -0.27
RNF4-201ENST00000314289 IGKV6D-21A0A0A0MT36 114 aa13.36□□□□□ -0.27
RNF4-201ENST00000314289 RAD51CO43502 376 aa13.36□□□□□ -0.27
RNF4-201ENST00000314289 PPFIA4O75335 1185 aa13.36□□□□□ -0.27
RNF4-201ENST00000314289 TUBBP07437 444 aa13.36□□□□□ -0.27
RNF4-201ENST00000314289 TXNP10599 105 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms