RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 CYP39A1Q9NYL5 469 aa12.41□□□□□ -0.42
PTPN2-201ENST00000309660 EIF3HO15372 352 aaKnown RBP eCLIP12.4□□□□□ -0.42
PTPN2-201ENST00000309660 DGAT1O75907 488 aa12.4□□□□□ -0.42
PTPN2-201ENST00000309660 ERLIN2O94905 339 aa12.4□□□□□ -0.42
PTPN2-201ENST00000309660 PYGMP11217 842 aa12.4□□□□□ -0.42
PTPN2-201ENST00000309660 DSG3P32926 999 aa12.4□□□□□ -0.42
PTPN2-201ENST00000309660 NF2P35240 595 aa12.4□□□□□ -0.42
PTPN2-201ENST00000309660 SEC24CP53992 1094 aa12.4□□□□□ -0.42
PTPN2-201ENST00000309660 CYP24A1Q07973 514 aa12.4□□□□□ -0.42
PTPN2-201ENST00000309660 SF3A3Q12874 501 aaKnown RBP eCLIP12.4□□□□□ -0.42
PTPN2-201ENST00000309660 C12orf56Q8IXR9 622 aa12.4□□□□□ -0.42
PTPN2-201ENST00000309660 ZSWIM1Q9BR11 485 aa12.4□□□□□ -0.42
PTPN2-201ENST00000309660 PAGR1Q9BTK6 254 aa12.4□□□□□ -0.42
PTPN2-201ENST00000309660 VPS33BQ9H267 617 aa12.4□□□□□ -0.42
PTPN2-201ENST00000309660 MAP3K20Q9NYL2 800 aaKnown RBP12.4□□□□□ -0.42
PTPN2-201ENST00000309660 ANAPC7Q9UJX3 599 aa12.4□□□□□ -0.42
PTPN2-201ENST00000309660 NOCTQ9UK39 431 aaKnown RBP12.4□□□□□ -0.42
PTPN2-201ENST00000309660 EBAG9O00559 213 aa12.4□□□□□ -0.42
PTPN2-201ENST00000309660 PIK3CAP42336 1068 aa12.4□□□□□ -0.42
PTPN2-201ENST00000309660 SP2Q02086 613 aa12.4□□□□□ -0.42
PTPN2-201ENST00000309660 WDR78Q5VTH9 848 aa12.4□□□□□ -0.42
PTPN2-201ENST00000309660 MCPH1Q8NEM0 835 aa12.4□□□□□ -0.42
PTPN2-201ENST00000309660 DEPTORQ8TB45 409 aa12.4□□□□□ -0.42
PTPN2-201ENST00000309660 HELQQ8TDG4 1101 aa12.4□□□□□ -0.42
PTPN2-201ENST00000309660 SHC3Q92529 594 aa12.4□□□□□ -0.42
PTPN2-201ENST00000309660 NOVA2Q9UNW9 492 aaKnown RBP12.4□□□□□ -0.42
PTPN2-201ENST00000309660 MARK3P27448 753 aa12.39□□□□□ -0.43
PTPN2-201ENST00000309660 PTENP60484 403 aa12.39□□□□□ -0.43
PTPN2-201ENST00000309660 TGFB2P61812 414 aa12.39□□□□□ -0.43
PTPN2-201ENST00000309660 IRX5P78411 483 aaPredicted RBP12.39□□□□□ -0.43
PTPN2-201ENST00000309660 WDR44Q5JSH3 913 aa12.39□□□□□ -0.43
PTPN2-201ENST00000309660 JAMLQ86YT9 394 aa12.39□□□□□ -0.43
PTPN2-201ENST00000309660 CNKSR2Q8WXI2 1034 aa12.39□□□□□ -0.43
PTPN2-201ENST00000309660 TIPINQ9BVW5 301 aa12.39□□□□□ -0.43
PTPN2-201ENST00000309660 ZNF541Q9H0D2 1346 aa12.39□□□□□ -0.43
PTPN2-201ENST00000309660 RPS12P25398 132 aaKnown RBP12.39□□□□□ -0.43
PTPN2-201ENST00000309660 VPS41P49754 854 aa12.39□□□□□ -0.43
PTPN2-201ENST00000309660 NLRP11P59045 1033 aaKnown RBP12.39□□□□□ -0.43
PTPN2-201ENST00000309660 EMC2Q15006 297 aa12.39□□□□□ -0.43
PTPN2-201ENST00000309660 MIS18BP1Q6P0N0 1132 aa12.39□□□□□ -0.43
PTPN2-201ENST00000309660 FBXO25Q8TCJ0 367 aa12.39□□□□□ -0.43
PTPN2-201ENST00000309660 SLC16A10Q8TF71 515 aa12.39□□□□□ -0.43
PTPN2-201ENST00000309660 TARS2Q9BW92 718 aaKnown RBP12.39□□□□□ -0.43
PTPN2-201ENST00000309660 FAM114A2Q9NRY5 505 aa12.39□□□□□ -0.43
PTPN2-201ENST00000309660 USTQ9Y2C2 406 aa12.39□□□□□ -0.43
PTPN2-201ENST00000309660 SYNGAP1Q96PV0 1343 aa12.39□□□□□ -0.43
PTPN2-201ENST00000309660 K7ERI5 159 aa12.39□□□□□ -0.43
PTPN2-201ENST00000309660 CDR2Q01850 454 aa12.39□□□□□ -0.43
PTPN2-201ENST00000309660 ZNF844Q08AG5 666 aa12.39□□□□□ -0.43
PTPN2-201ENST00000309660 ZBTB41Q5SVQ8 909 aa12.39□□□□□ -0.43
PTPN2-201ENST00000309660 CCDC137Q6PK04 289 aaKnown RBP12.39□□□□□ -0.43
PTPN2-201ENST00000309660 TMC3Q7Z5M5 1100 aa12.39□□□□□ -0.43
PTPN2-201ENST00000309660 NCAPG2Q86XI2 1143 aa12.39□□□□□ -0.43
PTPN2-201ENST00000309660 MREGQ8N565 214 aa12.39□□□□□ -0.43
PTPN2-201ENST00000309660 SLC17A8Q8NDX2 589 aa12.39□□□□□ -0.43
PTPN2-201ENST00000309660 C1orf54Q8WWF1 131 aa12.39□□□□□ -0.43
PTPN2-201ENST00000309660 FAM118BQ9BPY3 351 aa12.39□□□□□ -0.43
PTPN2-201ENST00000309660 ERP44Q9BS26 406 aa12.39□□□□□ -0.43
PTPN2-201ENST00000309660 ST6GALNAC4Q9H4F1 302 aa12.39□□□□□ -0.43
PTPN2-201ENST00000309660 ATAD5Q96QE3 1844 aa12.39□□□□□ -0.43
PTPN2-201ENST00000309660 MIF4GDA9UHW6 222 aaKnown RBP12.38□□□□□ -0.43
PTPN2-201ENST00000309660 CLDN3O15551 220 aa12.38□□□□□ -0.43
PTPN2-201ENST00000309660 DKC1O60832 514 aaKnown RBP eCLIP12.38□□□□□ -0.43
PTPN2-201ENST00000309660 TMOD1P28289 359 aa12.38□□□□□ -0.43
PTPN2-201ENST00000309660 MAPK4P31152 587 aa12.38□□□□□ -0.43
PTPN2-201ENST00000309660 WNT7BP56706 349 aa12.38□□□□□ -0.43
PTPN2-201ENST00000309660 TRIP13Q15645 432 aaPredicted RBP12.38□□□□□ -0.43
PTPN2-201ENST00000309660 CCDC50Q8IVM0 306 aa12.38□□□□□ -0.43
PTPN2-201ENST00000309660 SLC7A3Q8WY07 619 aa12.38□□□□□ -0.43
PTPN2-201ENST00000309660 ZNF302Q9NR11 478 aa12.38□□□□□ -0.43
PTPN2-201ENST00000309660 RASAL2Q9UJF2 1139 aa12.38□□□□□ -0.43
PTPN2-201ENST00000309660 TNS1Q9HBL0 1735 aaKnown RBP12.38□□□□□ -0.43
PTPN2-201ENST00000309660 E7EVH7 732 aa12.38□□□□□ -0.43
PTPN2-201ENST00000309660 PPP1R7Q15435 360 aa12.38□□□□□ -0.43
PTPN2-201ENST00000309660 ZBTB33Q86T24 672 aa12.38□□□□□ -0.43
PTPN2-201ENST00000309660 PRELID2Q8N945 189 aa12.38□□□□□ -0.43
PTPN2-201ENST00000309660 CCDC113Q9H0I3 377 aa12.38□□□□□ -0.43
PTPN2-201ENST00000309660 LRRC4CQ9HCJ2 640 aa12.38□□□□□ -0.43
PTPN2-201ENST00000309660 DNAJC17Q9NVM6 304 aaKnown RBP12.38□□□□□ -0.43
PTPN2-201ENST00000309660 AGO2Q9UKV8 859 aaKnown RBP12.38□□□□□ -0.43
PTPN2-201ENST00000309660 GRIN2DO15399 1336 aa12.38□□□□□ -0.43
PTPN2-201ENST00000309660 DCDC2CA8MYV0 355 aa12.38□□□□□ -0.43
PTPN2-201ENST00000309660 MYO1FO00160 1098 aa12.38□□□□□ -0.43
PTPN2-201ENST00000309660 SLCO1A2P46721 670 aa12.38□□□□□ -0.43
PTPN2-201ENST00000309660 STXBP2Q15833 593 aa12.38□□□□□ -0.43
PTPN2-201ENST00000309660 ZNF394Q53GI3 561 aa12.38□□□□□ -0.43
PTPN2-201ENST00000309660 BRDTQ58F21 947 aaPredicted RBP12.38□□□□□ -0.43
PTPN2-201ENST00000309660 XKR3Q5GH77 459 aa12.38□□□□□ -0.43
PTPN2-201ENST00000309660 TMEM270Q6UE05 265 aa12.38□□□□□ -0.43
PTPN2-201ENST00000309660 C11orf70Q9BRQ4 267 aa12.38□□□□□ -0.43
PTPN2-201ENST00000309660 HEMGNQ9BXL5 484 aa12.38□□□□□ -0.43
PTPN2-201ENST00000309660 FBXO40Q9UH90 709 aa12.38□□□□□ -0.43
PTPN2-201ENST00000309660 MTUS1Q9ULD2 1270 aa12.38□□□□□ -0.43
PTPN2-201ENST00000309660 SPDYE16A6NNV3 312 aaPredicted RBP12.37□□□□□ -0.43
PTPN2-201ENST00000309660 RPS6KA5O75582 802 aa12.37□□□□□ -0.43
PTPN2-201ENST00000309660 HLA-DRAP01903 254 aa12.37□□□□□ -0.43
PTPN2-201ENST00000309660 FDX1P10109 184 aa12.37□□□□□ -0.43
PTPN2-201ENST00000309660 RRM1P23921 792 aa12.37□□□□□ -0.43
PTPN2-201ENST00000309660 LSP1P33241 339 aa12.37□□□□□ -0.43
PTPN2-201ENST00000309660 GPC3P51654 580 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms