RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 ITGA8P53708 1063 aa14.13□□□□□ -0.15
DDX54-201ENST00000306014 TMPRSS15P98073 1019 aa14.13□□□□□ -0.15
DDX54-201ENST00000306014 CDR2Q01850 454 aa14.13□□□□□ -0.15
DDX54-201ENST00000306014 KCNMA1Q12791 1236 aa14.13□□□□□ -0.15
DDX54-201ENST00000306014 MKRN3Q13064 507 aaKnown RBP14.13□□□□□ -0.15
DDX54-201ENST00000306014 MTM1Q13496 603 aa14.13□□□□□ -0.15
DDX54-201ENST00000306014 SNRNP35Q16560 246 aaKnown RBP14.13□□□□□ -0.15
DDX54-201ENST00000306014 CDO1Q16878 200 aa14.13□□□□□ -0.15
DDX54-201ENST00000306014 P3H1Q32P28 736 aa14.13□□□□□ -0.15
DDX54-201ENST00000306014 ANKMY2Q8IV38 441 aa14.13□□□□□ -0.15
DDX54-201ENST00000306014 BAP1Q92560 729 aa14.13□□□□□ -0.15
DDX54-201ENST00000306014 GRAMD1AQ96CP6 724 aa14.13□□□□□ -0.15
DDX54-201ENST00000306014 TUBB6Q9BUF5 446 aa14.13□□□□□ -0.15
DDX54-201ENST00000306014 COX16Q9P0S2 106 aa14.13□□□□□ -0.15
DDX54-201ENST00000306014 GABBR1Q9UBS5 961 aa14.13□□□□□ -0.15
DDX54-201ENST00000306014 PCSK1NQ9UHG2 260 aa14.13□□□□□ -0.15
DDX54-201ENST00000306014 PPP1R9AQ9ULJ8 1098 aa14.13□□□□□ -0.15
DDX54-201ENST00000306014 ZNF263O14978 683 aa14.13□□□□□ -0.15
DDX54-201ENST00000306014 MAP3K7O43318 606 aa14.13□□□□□ -0.15
DDX54-201ENST00000306014 HAUS5O94927 633 aa14.13□□□□□ -0.15
DDX54-201ENST00000306014 SRGAP2CP0DJJ0 459 aa14.13□□□□□ -0.15
DDX54-201ENST00000306014 CCND2P30279 289 aa14.13□□□□□ -0.15
DDX54-201ENST00000306014 YWHABP31946 246 aaKnown RBP14.13□□□□□ -0.15
DDX54-201ENST00000306014 IGBP1P78318 339 aa14.13□□□□□ -0.15
DDX54-201ENST00000306014 NXNQ6DKJ4 435 aa14.13□□□□□ -0.15
DDX54-201ENST00000306014 ZNF662Q6ZS27 426 aa14.13□□□□□ -0.15
DDX54-201ENST00000306014 APTXQ7Z2E3 356 aaKnown RBP14.13□□□□□ -0.15
DDX54-201ENST00000306014 TRIM50Q86XT4 487 aa14.13□□□□□ -0.15
DDX54-201ENST00000306014 SP8Q8IXZ3 490 aa14.13□□□□□ -0.15
DDX54-201ENST00000306014 MCPH1Q8NEM0 835 aa14.13□□□□□ -0.15
DDX54-201ENST00000306014 PCDHGC5Q9Y5F6 944 aa14.13□□□□□ -0.15
DDX54-201ENST00000306014 XRN1Q8IZH2 1706 aaKnown RBP14.12□□□□□ -0.15
DDX54-201ENST00000306014 ERFP50548 548 aa14.12□□□□□ -0.15
DDX54-201ENST00000306014 RBBP5Q15291 538 aaKnown RBP14.12□□□□□ -0.15
DDX54-201ENST00000306014 TRADDQ15628 312 aa14.12□□□□□ -0.15
DDX54-201ENST00000306014 EEPD1Q7L9B9 569 aa14.12□□□□□ -0.15
DDX54-201ENST00000306014 TMC3Q7Z5M5 1100 aa14.12□□□□□ -0.15
DDX54-201ENST00000306014 TRIM42Q8IWZ5 723 aa14.12□□□□□ -0.15
DDX54-201ENST00000306014 C4orf32Q8N8J7 132 aa14.12□□□□□ -0.15
DDX54-201ENST00000306014 ATG4AQ8WYN0 398 aa14.12□□□□□ -0.15
DDX54-201ENST00000306014 STOML1Q9UBI4 398 aa14.12□□□□□ -0.15
DDX54-201ENST00000306014 SUGT1Q9Y2Z0 365 aa14.12□□□□□ -0.15
DDX54-201ENST00000306014 PSMC5P62195 406 aa14.12□□□□□ -0.15
DDX54-201ENST00000306014 NFIAQ12857 509 aa14.12□□□□□ -0.15
DDX54-201ENST00000306014 PLCB4Q15147 1175 aa14.12□□□□□ -0.15
DDX54-201ENST00000306014 SLC15A2Q16348 729 aa14.12□□□□□ -0.15
DDX54-201ENST00000306014 CAPRIN2Q6IMN6 1127 aaKnown RBP14.12□□□□□ -0.15
DDX54-201ENST00000306014 CYFIP1Q7L576 1253 aa14.12□□□□□ -0.15
DDX54-201ENST00000306014 CDKL2Q92772 493 aa14.12□□□□□ -0.15
DDX54-201ENST00000306014 ANKRD36BP1Q96IX9 119 aa14.12□□□□□ -0.15
DDX54-201ENST00000306014 SUFUQ9UMX1 484 aa14.12□□□□□ -0.15
DDX54-201ENST00000306014 COPEO14579 308 aa14.12□□□□□ -0.15
DDX54-201ENST00000306014 SLC26A4O43511 780 aa14.12□□□□□ -0.15
DDX54-201ENST00000306014 TMEM119Q4V9L6 283 aa14.12□□□□□ -0.15
DDX54-201ENST00000306014 THNSL1Q8IYQ7 743 aa14.12□□□□□ -0.15
DDX54-201ENST00000306014 NME8Q8N427 588 aa14.12□□□□□ -0.15
DDX54-201ENST00000306014 C3orf20Q8ND61 904 aa14.12□□□□□ -0.15
DDX54-201ENST00000306014 MTMR9Q96QG7 549 aa14.12□□□□□ -0.15
DDX54-201ENST00000306014 ROPN1BQ9BZX4 212 aaPredicted RBP14.12□□□□□ -0.15
DDX54-201ENST00000306014 ROPN1Q9HAT0 212 aaPredicted RBP14.12□□□□□ -0.15
DDX54-201ENST00000306014 AS3MTQ9HBK9 375 aa14.12□□□□□ -0.15
DDX54-201ENST00000306014 DDX3XO00571 662 aaKnown RBP eCLIP14.11□□□□□ -0.152e-25■■□□□ 12.7
DDX54-201ENST00000306014 CLGNO14967 610 aa14.11□□□□□ -0.15
DDX54-201ENST00000306014 OR6B2Q6IFH4 312 aa14.11□□□□□ -0.15
DDX54-201ENST00000306014 SWSAP1Q6NVH7 229 aa14.11□□□□□ -0.15
DDX54-201ENST00000306014 RFX8Q6ZV50 586 aa14.11□□□□□ -0.15
DDX54-201ENST00000306014 HIPK4Q8NE63 616 aa14.11□□□□□ -0.15
DDX54-201ENST00000306014 SLC20A1Q8WUM9 679 aa14.11□□□□□ -0.15
DDX54-201ENST00000306014 FAM129AQ9BZQ8 928 aa14.11□□□□□ -0.15
DDX54-201ENST00000306014 ZNF408Q9H9D4 720 aa14.11□□□□□ -0.15
DDX54-201ENST00000306014 ARFIP2P53365 341 aa14.11□□□□□ -0.15
DDX54-201ENST00000306014 KRT76Q01546 638 aa14.11□□□□□ -0.15
DDX54-201ENST00000306014 COL23A1Q86Y22 540 aaPredicted RBP14.11□□□□□ -0.15
DDX54-201ENST00000306014 CDHR1Q96JP9 859 aa14.11□□□□□ -0.15
DDX54-201ENST00000306014 PI4K2AQ9BTU6 479 aa14.11□□□□□ -0.15
DDX54-201ENST00000306014 POLR3CQ9BUI4 534 aaPredicted RBP14.11□□□□□ -0.15
DDX54-201ENST00000306014 FAM47DPA6NHR8 397 aa14.11□□□□□ -0.15
DDX54-201ENST00000306014 A6NJR5 290 aa14.11□□□□□ -0.15
DDX54-201ENST00000306014 GRM1Q13255 1194 aa14.11□□□□□ -0.15
DDX54-201ENST00000306014 COG2Q14746 738 aa14.11□□□□□ -0.15
DDX54-201ENST00000306014 R3HDM1Q15032 1099 aaKnown RBP14.11□□□□□ -0.15
DDX54-201ENST00000306014 C2CD6Q53TS8 623 aa14.11□□□□□ -0.15
DDX54-201ENST00000306014 SLFN12LQ6IEE8 588 aa14.11□□□□□ -0.15
DDX54-201ENST00000306014 GPD1LQ8N335 351 aa14.11□□□□□ -0.15
DDX54-201ENST00000306014 FAF2Q96CS3 445 aa14.11□□□□□ -0.15
DDX54-201ENST00000306014 TSC22D3Q99576 134 aa14.11□□□□□ -0.15
DDX54-201ENST00000306014 OSBPL1AQ9BXW6 950 aa14.11□□□□□ -0.15
DDX54-201ENST00000306014 ATP6V0A4Q9HBG4 840 aa14.11□□□□□ -0.15
DDX54-201ENST00000306014 IFT122Q9HBG6 1241 aa14.11□□□□□ -0.15
DDX54-201ENST00000306014 NGRNQ9NPE2 291 aaKnown RBP14.11□□□□□ -0.15
DDX54-201ENST00000306014 KITP10721 976 aa14.11□□□□□ -0.15
DDX54-201ENST00000306014 NPEPPSP55786 919 aa14.11□□□□□ -0.15
DDX54-201ENST00000306014 NSMCE1Q8WV22 266 aa14.11□□□□□ -0.15
DDX54-201ENST00000306014 SLC35C1Q96A29 364 aa14.11□□□□□ -0.15
DDX54-201ENST00000306014 MMTAG2Q9BU76 263 aaKnown RBP14.11□□□□□ -0.15
DDX54-201ENST00000306014 MIS12Q9H081 205 aa14.11□□□□□ -0.15
DDX54-201ENST00000306014 FANCGO15287 622 aa14.1□□□□□ -0.15
DDX54-201ENST00000306014 PRPSAP2O60256 369 aa14.1□□□□□ -0.15
DDX54-201ENST00000306014 KRT37O76014 449 aa14.1□□□□□ -0.15
DDX54-201ENST00000306014 SGPL1O95470 568 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms