RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 RCN2Q14257 317 aa15.66■□□□□ 0.1
COL6A2-201ENST00000300527 CCDC127Q96BQ5 260 aa15.66■□□□□ 0.1
COL6A2-201ENST00000300527 CCDC77Q9BR77 488 aa15.66■□□□□ 0.1
COL6A2-201ENST00000300527 ROPN1BQ9BZX4 212 aaPredicted RBP15.66■□□□□ 0.1
COL6A2-201ENST00000300527 VPS37BQ9H9H4 285 aa15.66■□□□□ 0.1
COL6A2-201ENST00000300527 ROPN1Q9HAT0 212 aaPredicted RBP15.66■□□□□ 0.1
COL6A2-201ENST00000300527 NPHS2Q9NP85 383 aa15.66■□□□□ 0.1
COL6A2-201ENST00000300527 KCNQ5Q9NR82 932 aa15.66■□□□□ 0.1
COL6A2-201ENST00000300527 O00370 1275 aa15.66■□□□□ 0.1
COL6A2-201ENST00000300527 CA4P22748 312 aa15.66■□□□□ 0.1
COL6A2-201ENST00000300527 ALDH3A1P30838 453 aa15.66■□□□□ 0.1
COL6A2-201ENST00000300527 LLGL2Q6P1M3 1020 aa15.66■□□□□ 0.1
COL6A2-201ENST00000300527 ASRGL1Q7L266 308 aa15.66■□□□□ 0.1
COL6A2-201ENST00000300527 SLFN12Q8IYM2 578 aa15.66■□□□□ 0.1
COL6A2-201ENST00000300527 LRRC8CQ8TDW0 803 aa15.66■□□□□ 0.1
COL6A2-201ENST00000300527 STK32AQ8WU08 396 aa15.66■□□□□ 0.1
COL6A2-201ENST00000300527 SLC5A5Q92911 643 aa15.66■□□□□ 0.1
COL6A2-201ENST00000300527 PCDHB18PQ96TA0 734 aa15.66■□□□□ 0.1
COL6A2-201ENST00000300527 EIF2AK1Q9BQI3 630 aaKnown RBP15.66■□□□□ 0.1
COL6A2-201ENST00000300527 CHKBQ9Y259 395 aa15.66■□□□□ 0.1
COL6A2-201ENST00000300527 C2CD2Q9Y426 696 aa15.66■□□□□ 0.1
COL6A2-201ENST00000300527 EXOC1LA0A1B0GW35 172 aa15.66■□□□□ 0.1
COL6A2-201ENST00000300527 RIMBP2O15034 1052 aa15.66■□□□□ 0.1
COL6A2-201ENST00000300527 EEF2P13639 858 aaKnown RBP15.66■□□□□ 0.1
COL6A2-201ENST00000300527 CTNNA2P26232 953 aa15.66■□□□□ 0.1
COL6A2-201ENST00000300527 MTFR1Q15390 333 aa15.66■□□□□ 0.1
COL6A2-201ENST00000300527 HHATQ5VTY9 493 aa15.66■□□□□ 0.1
COL6A2-201ENST00000300527 FOXR2Q6PJQ5 311 aa15.66■□□□□ 0.1
COL6A2-201ENST00000300527 UBN1Q9NPG3 1134 aa15.66■□□□□ 0.1
COL6A2-201ENST00000300527 KLHL11Q9NVR0 708 aa15.66■□□□□ 0.1
COL6A2-201ENST00000300527 IRAK4Q9NWZ3 460 aa15.66■□□□□ 0.1
COL6A2-201ENST00000300527 TOGARAM1Q9Y4F4 1720 aa15.65■□□□□ 0.1
COL6A2-201ENST00000300527 FAM86B1E9PN63 330 aa15.65■□□□□ 0.1
COL6A2-201ENST00000300527 C6orf229H3BNL8 230 aa15.65■□□□□ 0.1
COL6A2-201ENST00000300527 MAPK13O15264 365 aa15.65■□□□□ 0.1
COL6A2-201ENST00000300527 SLC16A3O15427 465 aaKnown RBP15.65■□□□□ 0.1
COL6A2-201ENST00000300527 FAM86B2P0C5J1 330 aa15.65■□□□□ 0.1
COL6A2-201ENST00000300527 ANXA13P27216 316 aa15.65■□□□□ 0.1
COL6A2-201ENST00000300527 SCNN1DP51172 638 aa15.65■□□□□ 0.1
COL6A2-201ENST00000300527 KLC1Q07866 573 aa15.65■□□□□ 0.1
COL6A2-201ENST00000300527 TAF1BQ53T94 588 aaPredicted RBP15.65■□□□□ 0.1
COL6A2-201ENST00000300527 RINT1Q6NUQ1 792 aa15.65■□□□□ 0.1
COL6A2-201ENST00000300527 DYDC2Q96IM9 177 aa15.65■□□□□ 0.1
COL6A2-201ENST00000300527 FAM84AQ96KN4 292 aa15.65■□□□□ 0.1
COL6A2-201ENST00000300527 MAGEB18Q96M61 343 aa15.65■□□□□ 0.1
COL6A2-201ENST00000300527 GPR88Q9GZN0 384 aa15.65■□□□□ 0.1
COL6A2-201ENST00000300527 ZBTB21Q9ULJ3 1066 aa15.65■□□□□ 0.1
COL6A2-201ENST00000300527 PEX5P50542 639 aa15.65■□□□□ 0.1
COL6A2-201ENST00000300527 ZBTB16Q05516 673 aa15.65■□□□□ 0.1
COL6A2-201ENST00000300527 KAZNQ674X7 775 aa15.65■□□□□ 0.1
COL6A2-201ENST00000300527 MFSD5Q6N075 450 aa15.65■□□□□ 0.1
COL6A2-201ENST00000300527 RFWD3Q6PCD5 774 aa15.65■□□□□ 0.1
COL6A2-201ENST00000300527 TRIM4Q9C037 500 aa15.65■□□□□ 0.1
COL6A2-201ENST00000300527 C12orf65Q9H3J6 166 aaKnown RBP15.65■□□□□ 0.1
COL6A2-201ENST00000300527 SAYSD1Q9NPB0 183 aa15.65■□□□□ 0.1
COL6A2-201ENST00000300527 CYP39A1Q9NYL5 469 aa15.65■□□□□ 0.1
COL6A2-201ENST00000300527 hCG_1984214I3L0E3 225 aa15.64■□□□□ 0.1
COL6A2-201ENST00000300527 GOLGA8RI6L899 631 aa15.64■□□□□ 0.1
COL6A2-201ENST00000300527 GAS8O95995 478 aa15.64■□□□□ 0.1
COL6A2-201ENST00000300527 TPBGLP0DKB5 382 aa15.64■□□□□ 0.1
COL6A2-201ENST00000300527 KRT5P13647 590 aa15.64■□□□□ 0.1
COL6A2-201ENST00000300527 RPA1P27694 616 aa15.64■□□□□ 0.1
COL6A2-201ENST00000300527 POLGP54098 1239 aaPredicted RBP15.64■□□□□ 0.1
COL6A2-201ENST00000300527 WDR4P57081 412 aaKnown RBP15.64■□□□□ 0.1
COL6A2-201ENST00000300527 TCP10Q12799 353 aa15.64■□□□□ 0.1
COL6A2-201ENST00000300527 HYIQ5T013 277 aa15.64■□□□□ 0.1
COL6A2-201ENST00000300527 TPTE2Q6XPS3 522 aa15.64■□□□□ 0.1
COL6A2-201ENST00000300527 SLC47A2Q86VL8 602 aa15.64■□□□□ 0.1
COL6A2-201ENST00000300527 HOMEZQ8IX15 550 aa15.64■□□□□ 0.1
COL6A2-201ENST00000300527 SCYL3Q8IZE3 742 aa15.64■□□□□ 0.1
COL6A2-201ENST00000300527 ZNF713Q8N859 430 aaPredicted RBP15.64■□□□□ 0.1
COL6A2-201ENST00000300527 SNF8Q96H20 258 aa15.64■□□□□ 0.1
COL6A2-201ENST00000300527 KLF6Q99612 283 aaPredicted RBP15.64■□□□□ 0.1
COL6A2-201ENST00000300527 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.64■□□□□ 0.1
COL6A2-201ENST00000300527 ETAA1Q9NY74 926 aa15.64■□□□□ 0.1
COL6A2-201ENST00000300527 ANAPC7Q9UJX3 599 aa15.64■□□□□ 0.1
COL6A2-201ENST00000300527 A0A0G2JND7 137 aa15.64■□□□□ 0.09
COL6A2-201ENST00000300527 CFAP69A5D8W1 941 aa15.64■□□□□ 0.09
COL6A2-201ENST00000300527 ZC3H3Q8IXZ2 948 aaKnown RBP15.64■□□□□ 0.09
COL6A2-201ENST00000300527 OLIG1Q8TAK6 271 aa15.64■□□□□ 0.09
COL6A2-201ENST00000300527 DENND2DQ9H6A0 471 aaPredicted RBP15.64■□□□□ 0.09
COL6A2-201ENST00000300527 PARVGQ9HBI0 331 aa15.64■□□□□ 0.09
COL6A2-201ENST00000300527 AGPAT3Q9NRZ7 376 aa15.64■□□□□ 0.09
COL6A2-201ENST00000300527 R3HDM2Q9Y2K5 976 aaKnown RBP15.64■□□□□ 0.09
COL6A2-201ENST00000300527 FAM47DPA6NHR8 397 aa15.64■□□□□ 0.09
COL6A2-201ENST00000300527 GOLGA8SH3BPF8 625 aa15.64■□□□□ 0.09
COL6A2-201ENST00000300527 GOLGA8MH3BSY2 632 aa15.64■□□□□ 0.09
COL6A2-201ENST00000300527 PPP4CP60510 307 aa15.64■□□□□ 0.09
COL6A2-201ENST00000300527 CETN1Q12798 172 aa15.64■□□□□ 0.09
COL6A2-201ENST00000300527 NBPF20Q3BBV1 942 aa15.64■□□□□ 0.09
COL6A2-201ENST00000300527 ANKRD35Q8N283 1001 aa15.64■□□□□ 0.09
COL6A2-201ENST00000300527 P2RX7Q99572 595 aaKnown RBP15.64■□□□□ 0.09
COL6A2-201ENST00000300527 ZFP69BQ9UJL9 534 aa15.64■□□□□ 0.09
COL6A2-201ENST00000300527 YY1P25490 414 aa15.63■□□□□ 0.09
COL6A2-201ENST00000300527 CACNB3P54284 484 aa15.63■□□□□ 0.09
COL6A2-201ENST00000300527 GTF2IP78347 998 aa15.63■□□□□ 0.09
COL6A2-201ENST00000300527 RCN1Q15293 331 aa15.63■□□□□ 0.09
COL6A2-201ENST00000300527 PPP1R21Q6ZMI0 780 aa15.63■□□□□ 0.09
COL6A2-201ENST00000300527 CYFIP1Q7L576 1253 aa15.63■□□□□ 0.09
COL6A2-201ENST00000300527 NOP9Q86U38 636 aaKnown RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms