RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 CFHR5Q9BXR6 569 aa17.01■□□□□ 0.31
HERPUD1-201ENST00000300302 IFIH1Q9BYX4 1025 aaKnown RBP17.01■□□□□ 0.31
HERPUD1-201ENST00000300302 TSGA10Q9BZW7 698 aa17.01■□□□□ 0.31
HERPUD1-201ENST00000300302 MYO1AQ9UBC5 1043 aa17.01■□□□□ 0.31
HERPUD1-201ENST00000300302 AJAP1Q9UKB5 411 aaPredicted RBP17.01■□□□□ 0.31
HERPUD1-201ENST00000300302 TTLL13PA6NNM8 815 aa17.01■□□□□ 0.31
HERPUD1-201ENST00000300302 PROZP22891 400 aa17.01■□□□□ 0.31
HERPUD1-201ENST00000300302 GPC3P51654 580 aa17.01■□□□□ 0.31
HERPUD1-201ENST00000300302 DRAP1Q14919 205 aaPredicted RBP17.01■□□□□ 0.31
HERPUD1-201ENST00000300302 VPS36Q86VN1 386 aa17.01■□□□□ 0.31
HERPUD1-201ENST00000300302 KIAA0319LQ8IZA0 1049 aa17.01■□□□□ 0.31
HERPUD1-201ENST00000300302 JAKMIP2Q96AA8 810 aa17.01■□□□□ 0.31
HERPUD1-201ENST00000300302 SPC25Q9HBM1 224 aa17.01■□□□□ 0.31
HERPUD1-201ENST00000300302 UBE2TQ9NPD8 197 aaPredicted RBP17.01■□□□□ 0.31
HERPUD1-201ENST00000300302 RAB20Q9NX57 234 aa17.01■□□□□ 0.31
HERPUD1-201ENST00000300302 TNFSF13BQ9Y275 285 aa17.01■□□□□ 0.31
HERPUD1-201ENST00000300302 RBAK-RBAKDNI3L0D1 243 aa17■□□□□ 0.31
HERPUD1-201ENST00000300302 HAS3O00219 553 aa17■□□□□ 0.31
HERPUD1-201ENST00000300302 ARHGAP25P42331 645 aa17■□□□□ 0.31
HERPUD1-201ENST00000300302 VAV2P52735 878 aa17■□□□□ 0.31
HERPUD1-201ENST00000300302 BEX3Q00994 111 aa17■□□□□ 0.31
HERPUD1-201ENST00000300302 CYP27A1Q02318 531 aa17■□□□□ 0.31
HERPUD1-201ENST00000300302 KIF5AQ12840 1032 aa17■□□□□ 0.31
HERPUD1-201ENST00000300302 SURF1Q15526 300 aa17■□□□□ 0.31
HERPUD1-201ENST00000300302 ZNF568Q3ZCX4 644 aa17■□□□□ 0.31
HERPUD1-201ENST00000300302 CCDC122Q5T0U0 273 aa17■□□□□ 0.31
HERPUD1-201ENST00000300302 GPIHBP1Q8IV16 184 aa17■□□□□ 0.31
HERPUD1-201ENST00000300302 TRPV1Q8NER1 839 aa17■□□□□ 0.31
HERPUD1-201ENST00000300302 MINDY3Q9H8M7 445 aa17■□□□□ 0.31
HERPUD1-201ENST00000300302 PDE11AQ9HCR9 933 aa17■□□□□ 0.31
HERPUD1-201ENST00000300302 PTPRHQ9HD43 1115 aa17■□□□□ 0.31
HERPUD1-201ENST00000300302 TOPORSQ9NS56 1045 aaPredicted RBP17■□□□□ 0.31
HERPUD1-201ENST00000300302 PCDHA13Q9Y5I0 950 aa17■□□□□ 0.31
HERPUD1-201ENST00000300302 A0A0U1RQJ8 604 aa16.99■□□□□ 0.31
HERPUD1-201ENST00000300302 MBLAC1A4D2B0 266 aaPredicted RBP16.99■□□□□ 0.31
HERPUD1-201ENST00000300302 ZC3H11AO75152 810 aaKnown RBP eCLIP16.99■□□□□ 0.31
HERPUD1-201ENST00000300302 HOXD10P28358 340 aa16.99■□□□□ 0.31
HERPUD1-201ENST00000300302 CASQ1P31415 396 aa16.99■□□□□ 0.31
HERPUD1-201ENST00000300302 AP3M2P53677 418 aa16.99■□□□□ 0.31
HERPUD1-201ENST00000300302 GFPT1Q06210 699 aaPredicted RBP16.99■□□□□ 0.31
HERPUD1-201ENST00000300302 ENOX2Q16206 610 aaKnown RBP16.99■□□□□ 0.31
HERPUD1-201ENST00000300302 SLC18A3Q16572 532 aa16.99■□□□□ 0.31
HERPUD1-201ENST00000300302 SRGAP1Q7Z6B7 1085 aa16.99■□□□□ 0.31
HERPUD1-201ENST00000300302 BRSK2Q8IWQ3 736 aa16.99■□□□□ 0.31
HERPUD1-201ENST00000300302 CD99L2Q8TCZ2 262 aa16.99■□□□□ 0.31
HERPUD1-201ENST00000300302 ATRIPQ8WXE1 791 aa16.99■□□□□ 0.31
HERPUD1-201ENST00000300302 FAM81BQ96LP2 452 aa16.99■□□□□ 0.31
HERPUD1-201ENST00000300302 NT5C1BQ96P26 610 aa16.99■□□□□ 0.31
HERPUD1-201ENST00000300302 CGRRF1Q99675 332 aa16.99■□□□□ 0.31
HERPUD1-201ENST00000300302 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.99■□□□□ 0.31
HERPUD1-201ENST00000300302 CNTNAP2Q9UHC6 1331 aa16.99■□□□□ 0.31
HERPUD1-201ENST00000300302 CASP8AP2Q9UKL3 1982 aa16.99■□□□□ 0.31
HERPUD1-201ENST00000300302 SMIM35A0A1B0GVV1 85 aa16.99■□□□□ 0.31
HERPUD1-201ENST00000300302 ABLIM1O14639 778 aa16.99■□□□□ 0.31
HERPUD1-201ENST00000300302 ZNF263O14978 683 aa16.99■□□□□ 0.31
HERPUD1-201ENST00000300302 B4GALT5O43286 388 aa16.99■□□□□ 0.31
HERPUD1-201ENST00000300302 FAM189A1O60320 539 aa16.99■□□□□ 0.31
HERPUD1-201ENST00000300302 GFPT2O94808 682 aa16.99■□□□□ 0.31
HERPUD1-201ENST00000300302 C6orf222P0C671 652 aaPredicted RBP16.99■□□□□ 0.31
HERPUD1-201ENST00000300302 GNAT1P11488 350 aa16.99■□□□□ 0.31
HERPUD1-201ENST00000300302 MFAP3P55082 362 aa16.99■□□□□ 0.31
HERPUD1-201ENST00000300302 GJA9P57773 515 aa16.99■□□□□ 0.31
HERPUD1-201ENST00000300302 PURAQ00577 322 aaKnown RBP16.99■□□□□ 0.31
HERPUD1-201ENST00000300302 PTK2Q05397 1052 aa16.99■□□□□ 0.31
HERPUD1-201ENST00000300302 ARHGAP44Q17R89 818 aa16.99■□□□□ 0.31
HERPUD1-201ENST00000300302 ZBTB41Q5SVQ8 909 aa16.99■□□□□ 0.31
HERPUD1-201ENST00000300302 C15orf39Q6ZRI6 1047 aa16.99■□□□□ 0.31
HERPUD1-201ENST00000300302 TAS1R2Q8TE23 839 aa16.99■□□□□ 0.31
HERPUD1-201ENST00000300302 SEMA4DQ92854 862 aa16.99■□□□□ 0.31
HERPUD1-201ENST00000300302 PPP1R16BQ96T49 567 aa16.99■□□□□ 0.31
HERPUD1-201ENST00000300302 SEPT4O43236 478 aa16.98■□□□□ 0.31
HERPUD1-201ENST00000300302 EVI5O60447 810 aa16.98■□□□□ 0.31
HERPUD1-201ENST00000300302 ERLIN2O94905 339 aa16.98■□□□□ 0.31
HERPUD1-201ENST00000300302 IQCF3P0C7M6 154 aa16.98■□□□□ 0.31
HERPUD1-201ENST00000300302 RARBP10826 455 aa16.98■□□□□ 0.31
HERPUD1-201ENST00000300302 CYP2C9P11712 490 aa16.98■□□□□ 0.31
HERPUD1-201ENST00000300302 MAGEA1P43355 309 aa16.98■□□□□ 0.31
HERPUD1-201ENST00000300302 IRX5P78411 483 aaPredicted RBP16.98■□□□□ 0.31
HERPUD1-201ENST00000300302 ZACNQ401N2 412 aa16.98■□□□□ 0.31
HERPUD1-201ENST00000300302 ARHGEF19Q8IW93 802 aa16.98■□□□□ 0.31
HERPUD1-201ENST00000300302 PPM1KQ8N3J5 372 aa16.98■□□□□ 0.31
HERPUD1-201ENST00000300302 GPR88Q9GZN0 384 aa16.98■□□□□ 0.31
HERPUD1-201ENST00000300302 ADAMTS1Q9UHI8 967 aa16.98■□□□□ 0.31
HERPUD1-201ENST00000300302 CPSF3Q9UKF6 684 aaKnown RBP16.98■□□□□ 0.31
HERPUD1-201ENST00000300302 GUCA1BQ9UMX6 200 aa16.98■□□□□ 0.31
HERPUD1-201ENST00000300302 GPR25O00155 361 aa16.97■□□□□ 0.31
HERPUD1-201ENST00000300302 BIRC3Q13489 604 aa16.97■□□□□ 0.31
HERPUD1-201ENST00000300302 SEZ6Q53EL9 994 aa16.97■□□□□ 0.31
HERPUD1-201ENST00000300302 WDR44Q5JSH3 913 aa16.97■□□□□ 0.31
HERPUD1-201ENST00000300302 GNASQ5JWF2 1037 aa16.97■□□□□ 0.31
HERPUD1-201ENST00000300302 ZNF569Q5MCW4 686 aa16.97■□□□□ 0.31
HERPUD1-201ENST00000300302 C10orf76Q5T2E6 689 aa16.97■□□□□ 0.31
HERPUD1-201ENST00000300302 WDR49Q8IV35 697 aa16.97■□□□□ 0.31
HERPUD1-201ENST00000300302 C7orf31Q8N865 590 aa16.97■□□□□ 0.31
HERPUD1-201ENST00000300302 ZNF516Q92618 1163 aa16.97■□□□□ 0.31
HERPUD1-201ENST00000300302 WDR24Q96S15 920 aa16.97■□□□□ 0.31
HERPUD1-201ENST00000300302 GCOM2Q9BZD3 368 aaPredicted RBP16.97■□□□□ 0.31
HERPUD1-201ENST00000300302 IRX2Q9BZI1 471 aaPredicted RBP16.97■□□□□ 0.31
HERPUD1-201ENST00000300302 FAM49AQ9H0Q0 323 aaPredicted RBP16.97■□□□□ 0.31
HERPUD1-201ENST00000300302 C17orf102A2RUQ5 167 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms