RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 hCG_1984214I3L0E3 225 aa13.91□□□□□ -0.18
TVP23A-201ENST00000299866 YARSP54577 528 aaKnown RBP13.91□□□□□ -0.18
TVP23A-201ENST00000299866 SF3B3Q15393 1217 aaKnown RBP13.91□□□□□ -0.18
TVP23A-201ENST00000299866 SIX1Q15475 284 aaPredicted RBP13.91□□□□□ -0.18
TVP23A-201ENST00000299866 SGSM1Q2NKQ1 1148 aa13.91□□□□□ -0.18
TVP23A-201ENST00000299866 ZNF568Q3ZCX4 644 aa13.91□□□□□ -0.18
TVP23A-201ENST00000299866 MYCT1Q8N699 235 aa13.91□□□□□ -0.18
TVP23A-201ENST00000299866 ZNF713Q8N859 430 aaPredicted RBP13.91□□□□□ -0.18
TVP23A-201ENST00000299866 INPP5DQ92835 1189 aa13.91□□□□□ -0.18
TVP23A-201ENST00000299866 FGD4Q96M96 766 aa13.91□□□□□ -0.18
TVP23A-201ENST00000299866 ACP6Q9NPH0 428 aa13.91□□□□□ -0.18
TVP23A-201ENST00000299866 ROBO3Q96MS0 1386 aa13.91□□□□□ -0.18
TVP23A-201ENST00000299866 FAM196BA6NMK8 535 aa13.91□□□□□ -0.18
TVP23A-201ENST00000299866 ATP9AO75110 1047 aa13.91□□□□□ -0.18
TVP23A-201ENST00000299866 BTDP43251 543 aa13.91□□□□□ -0.18
TVP23A-201ENST00000299866 MYL7Q01449 175 aa13.91□□□□□ -0.18
TVP23A-201ENST00000299866 RCN1Q15293 331 aa13.91□□□□□ -0.18
TVP23A-201ENST00000299866 PDCD2Q16342 344 aaPredicted RBP13.91□□□□□ -0.18
TVP23A-201ENST00000299866 WASHC2DQ5SRD0 308 aa13.91□□□□□ -0.18
TVP23A-201ENST00000299866 HP1BP3Q5SSJ5 553 aaPredicted RBP13.91□□□□□ -0.18
TVP23A-201ENST00000299866 SNX30Q5VWJ9 437 aa13.91□□□□□ -0.18
TVP23A-201ENST00000299866 CAPN12Q6ZSI9 719 aa13.91□□□□□ -0.18
TVP23A-201ENST00000299866 ANKRD35Q8N283 1001 aa13.91□□□□□ -0.18
TVP23A-201ENST00000299866 ENDOVQ8N8Q3 282 aaKnown RBP13.91□□□□□ -0.18
TVP23A-201ENST00000299866 SYT2Q8N9I0 419 aaPredicted RBP13.91□□□□□ -0.18
TVP23A-201ENST00000299866 ZNF333Q96JL9 665 aa13.91□□□□□ -0.18
TVP23A-201ENST00000299866 GPR101Q96P66 508 aaPredicted RBP13.91□□□□□ -0.18
TVP23A-201ENST00000299866 WNT8AQ9H1J5 351 aa13.91□□□□□ -0.18
TVP23A-201ENST00000299866 DCLRE1BQ9H816 532 aa13.91□□□□□ -0.18
TVP23A-201ENST00000299866 WHRNQ9P202 907 aa13.91□□□□□ -0.18
TVP23A-201ENST00000299866 STOML1Q9UBI4 398 aa13.91□□□□□ -0.18
TVP23A-201ENST00000299866 USP17L10C9JJH3 530 aa13.9□□□□□ -0.18
TVP23A-201ENST00000299866 CDH16O75309 829 aa13.9□□□□□ -0.18
TVP23A-201ENST00000299866 DCTN3O75935 186 aa13.9□□□□□ -0.18
TVP23A-201ENST00000299866 RNF8O76064 485 aa13.9□□□□□ -0.18
TVP23A-201ENST00000299866 PYGLP06737 847 aa13.9□□□□□ -0.18
TVP23A-201ENST00000299866 SSR1P43307 286 aaKnown RBP13.9□□□□□ -0.18
TVP23A-201ENST00000299866 RASSF2P50749 326 aa13.9□□□□□ -0.18
TVP23A-201ENST00000299866 CYP1B1Q16678 543 aa13.9□□□□□ -0.18
TVP23A-201ENST00000299866 MTHFD1LQ6UB35 978 aa13.9□□□□□ -0.18
TVP23A-201ENST00000299866 C4orf33Q8N1A6 199 aa13.9□□□□□ -0.18
TVP23A-201ENST00000299866 B4GALNT2Q8NHY0 566 aa13.9□□□□□ -0.18
TVP23A-201ENST00000299866 EPAS1Q99814 870 aa13.9□□□□□ -0.18
TVP23A-201ENST00000299866 SNED1Q8TER0 1413 aa13.9□□□□□ -0.18
TVP23A-201ENST00000299866 POC1B-GALNT4F8VUJ3 575 aa13.9□□□□□ -0.18
TVP23A-201ENST00000299866 ABLIM1O14639 778 aa13.9□□□□□ -0.18
TVP23A-201ENST00000299866 EYA4O95677 639 aa13.9□□□□□ -0.18
TVP23A-201ENST00000299866 ATF2P15336 505 aa13.9□□□□□ -0.18
TVP23A-201ENST00000299866 ITIH2P19823 946 aa13.9□□□□□ -0.18
TVP23A-201ENST00000299866 MARK3P27448 753 aa13.9□□□□□ -0.18
TVP23A-201ENST00000299866 RANBP1P43487 201 aa13.9□□□□□ -0.18
TVP23A-201ENST00000299866 SLC5A9Q2M3M2 681 aa13.9□□□□□ -0.18
TVP23A-201ENST00000299866 KCTD1Q719H9 257 aa13.9□□□□□ -0.18
TVP23A-201ENST00000299866 C7orf43Q8WVR3 580 aa13.9□□□□□ -0.18
TVP23A-201ENST00000299866 SCG3Q8WXD2 468 aaKnown RBP13.9□□□□□ -0.18
TVP23A-201ENST00000299866 EZH1Q92800 747 aaPredicted RBP13.9□□□□□ -0.18
TVP23A-201ENST00000299866 BORCS6Q96GS4 357 aa13.9□□□□□ -0.18
TVP23A-201ENST00000299866 SNF8Q96H20 258 aa13.9□□□□□ -0.18
TVP23A-201ENST00000299866 CCDC77Q9BR77 488 aa13.9□□□□□ -0.18
TVP23A-201ENST00000299866 ZFP69BQ9UJL9 534 aa13.9□□□□□ -0.18
TVP23A-201ENST00000299866 STARD13Q9Y3M8 1113 aa13.9□□□□□ -0.18
TVP23A-201ENST00000299866 KRT36O76013 467 aa13.89□□□□□ -0.19
TVP23A-201ENST00000299866 KCNA3P22001 575 aa13.89□□□□□ -0.19
TVP23A-201ENST00000299866 VHLP40337 213 aa13.89□□□□□ -0.19
TVP23A-201ENST00000299866 CLK2P49760 499 aaKnown RBP13.89□□□□□ -0.19
TVP23A-201ENST00000299866 OR52E8Q6IFG1 317 aa13.89□□□□□ -0.19
TVP23A-201ENST00000299866 IRGCQ6NXR0 463 aa13.89□□□□□ -0.19
TVP23A-201ENST00000299866 DSTYKQ6XUX3 929 aa13.89□□□□□ -0.19
TVP23A-201ENST00000299866 FBXO41Q8TF61 875 aa13.89□□□□□ -0.19
TVP23A-201ENST00000299866 NUP85Q9BW27 656 aa13.89□□□□□ -0.19
TVP23A-201ENST00000299866 RGL1Q9NZL6 768 aa13.89□□□□□ -0.19
TVP23A-201ENST00000299866 USP20Q9Y2K6 914 aa13.89□□□□□ -0.19
TVP23A-201ENST00000299866 FAM13AO94988 1023 aa13.89□□□□□ -0.19
TVP23A-201ENST00000299866 SPATA31C1P0DKV0 1188 aa13.89□□□□□ -0.19
TVP23A-201ENST00000299866 ERFP50548 548 aa13.89□□□□□ -0.19
TVP23A-201ENST00000299866 CACNA2D1P54289 1103 aa13.89□□□□□ -0.19
TVP23A-201ENST00000299866 ASPRV1Q53RT3 343 aa13.89□□□□□ -0.19
TVP23A-201ENST00000299866 TMEM63BQ5T3F8 832 aa13.89□□□□□ -0.19
TVP23A-201ENST00000299866 RHBDF2Q6PJF5 856 aa13.89□□□□□ -0.19
TVP23A-201ENST00000299866 SLC30A10Q6XR72 485 aa13.89□□□□□ -0.19
TVP23A-201ENST00000299866 CCNJLQ8IV13 435 aa13.89□□□□□ -0.19
TVP23A-201ENST00000299866 GORASP1Q9BQQ3 440 aa13.89□□□□□ -0.19
TVP23A-201ENST00000299866 NPHS2Q9NP85 383 aa13.89□□□□□ -0.19
TVP23A-201ENST00000299866 UBN1Q9NPG3 1134 aa13.89□□□□□ -0.19
TVP23A-201ENST00000299866 DCTN4Q9UJW0 460 aa13.89□□□□□ -0.19
TVP23A-201ENST00000299866 WDR91A4D1P6 747 aa13.89□□□□□ -0.19
TVP23A-201ENST00000299866 CDR2Q01850 454 aa13.89□□□□□ -0.19
TVP23A-201ENST00000299866 CUL3Q13618 768 aa13.89□□□□□ -0.19
TVP23A-201ENST00000299866 FOXB2Q5VYV0 432 aa13.89□□□□□ -0.19
TVP23A-201ENST00000299866 RFX8Q6ZV50 586 aa13.89□□□□□ -0.19
TVP23A-201ENST00000299866 MTDHQ86UE4 582 aaKnown RBP13.89□□□□□ -0.19
TVP23A-201ENST00000299866 ERMNQ8TAM6 284 aa13.89□□□□□ -0.19
TVP23A-201ENST00000299866 ZNF564Q8TBZ8 553 aaPredicted RBP13.89□□□□□ -0.19
TVP23A-201ENST00000299866 FAM136AQ96C01 138 aa13.89□□□□□ -0.19
TVP23A-201ENST00000299866 PCDHB18PQ96TA0 734 aa13.89□□□□□ -0.19
TVP23A-201ENST00000299866 DDX50Q9BQ39 737 aaKnown RBP13.89□□□□□ -0.19
TVP23A-201ENST00000299866 PCMTD2Q9NV79 361 aa13.89□□□□□ -0.19
TVP23A-201ENST00000299866 FRMD4BQ9Y2L6 1034 aa13.89□□□□□ -0.19
TVP23A-201ENST00000299866 ADGRA3Q8IWK6 1321 aa13.89□□□□□ -0.19
TVP23A-201ENST00000299866 SKIP12755 728 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms