RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 FAM107BQ9H098 131 aa6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 ADARB2Q9NS39 739 aaKnown RBP6.51□□□□□ -1.37
TNFSF4-201ENST00000281834 ANKRD62A6NC57 917 aa6.5□□□□□ -1.37
TNFSF4-201ENST00000281834 GOLGA6CA6NDK9 693 aa6.5□□□□□ -1.37
TNFSF4-201ENST00000281834 CLDN3O15551 220 aa6.5□□□□□ -1.37
TNFSF4-201ENST00000281834 ATP8B1O43520 1251 aa6.5□□□□□ -1.37
TNFSF4-201ENST00000281834 DKC1O60832 514 aaKnown RBP eCLIP6.5□□□□□ -1.37
TNFSF4-201ENST00000281834 LYPLA2O95372 231 aa6.5□□□□□ -1.37
TNFSF4-201ENST00000281834 HLA-DRAP01903 254 aa6.5□□□□□ -1.37
TNFSF4-201ENST00000281834 GOLGA6DP0CG33 693 aa6.5□□□□□ -1.37
TNFSF4-201ENST00000281834 CYP11B1P15538 503 aa6.5□□□□□ -1.37
TNFSF4-201ENST00000281834 COMTP21964 271 aa6.5□□□□□ -1.37
TNFSF4-201ENST00000281834 KCNJ1P48048 391 aa6.5□□□□□ -1.37
TNFSF4-201ENST00000281834 GPR162Q16538 588 aa6.5□□□□□ -1.37
TNFSF4-201ENST00000281834 CFAP58Q5T655 872 aa6.5□□□□□ -1.37
TNFSF4-201ENST00000281834 USP37Q86T82 979 aa6.5□□□□□ -1.37
TNFSF4-201ENST00000281834 CCDC25Q86WR0 208 aa6.5□□□□□ -1.37
TNFSF4-201ENST00000281834 SLC9A9Q8IVB4 645 aa6.5□□□□□ -1.37
TNFSF4-201ENST00000281834 DHX37Q8IY37 1157 aaKnown RBP6.5□□□□□ -1.37
TNFSF4-201ENST00000281834 CEP120Q8N960 986 aa6.5□□□□□ -1.37
TNFSF4-201ENST00000281834 OR5B17Q8NGF7 314 aa6.5□□□□□ -1.37
TNFSF4-201ENST00000281834 SGIP1Q9BQI5 828 aa6.5□□□□□ -1.37
TNFSF4-201ENST00000281834 PORCNQ9H237 461 aa6.5□□□□□ -1.37
TNFSF4-201ENST00000281834 DNAJC17Q9NVM6 304 aaKnown RBP6.5□□□□□ -1.37
TNFSF4-201ENST00000281834 KLHL11Q9NVR0 708 aa6.5□□□□□ -1.37
TNFSF4-201ENST00000281834 GOLGA6AQ9NYA3 693 aa6.5□□□□□ -1.37
TNFSF4-201ENST00000281834 FAM53CQ9NYF3 392 aa6.5□□□□□ -1.37
TNFSF4-201ENST00000281834 NXF1Q9UBU9 619 aaKnown RBP6.5□□□□□ -1.37
TNFSF4-201ENST00000281834 PCDHB4Q9Y5E5 795 aa6.5□□□□□ -1.37
TNFSF4-201ENST00000281834 PTPRJQ12913 1337 aa6.5□□□□□ -1.37
TNFSF4-201ENST00000281834 UMODL1Q5DID0 1318 aa6.5□□□□□ -1.37
TNFSF4-201ENST00000281834 TARSL2A2RTX5 802 aaKnown RBP6.5□□□□□ -1.37
TNFSF4-201ENST00000281834 ZEB2O60315 1214 aa6.5□□□□□ -1.37
TNFSF4-201ENST00000281834 EDN1P05305 212 aa6.5□□□□□ -1.37
TNFSF4-201ENST00000281834 TUBBP07437 444 aa6.5□□□□□ -1.37
TNFSF4-201ENST00000281834 CFHP08603 1231 aa6.5□□□□□ -1.37
TNFSF4-201ENST00000281834 TXNP10599 105 aaKnown RBP6.5□□□□□ -1.37
TNFSF4-201ENST00000281834 TMOD1P28289 359 aa6.5□□□□□ -1.37
TNFSF4-201ENST00000281834 ERVK-9P63128 1117 aa6.5□□□□□ -1.37
TNFSF4-201ENST00000281834 TRIP13Q15645 432 aaPredicted RBP6.5□□□□□ -1.37
TNFSF4-201ENST00000281834 C10orf76Q5T2E6 689 aa6.5□□□□□ -1.37
TNFSF4-201ENST00000281834 DPY19L2Q6NUT2 758 aa6.5□□□□□ -1.37
TNFSF4-201ENST00000281834 CCDC50Q8IVM0 306 aa6.5□□□□□ -1.37
TNFSF4-201ENST00000281834 SYCE1Q8N0S2 351 aa6.5□□□□□ -1.37
TNFSF4-201ENST00000281834 KCTD17Q8N5Z5 321 aa6.5□□□□□ -1.37
TNFSF4-201ENST00000281834 ZNF564Q8TBZ8 553 aaPredicted RBP6.5□□□□□ -1.37
TNFSF4-201ENST00000281834 FBXO41Q8TF61 875 aa6.5□□□□□ -1.37
TNFSF4-201ENST00000281834 CDCA5Q96FF9 252 aa6.5□□□□□ -1.37
TNFSF4-201ENST00000281834 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.5□□□□□ -1.37
TNFSF4-201ENST00000281834 HEMGNQ9BXL5 484 aa6.5□□□□□ -1.37
TNFSF4-201ENST00000281834 TMEM8AQ9HCN3 771 aa6.5□□□□□ -1.37
TNFSF4-201ENST00000281834 MAP3K20Q9NYL2 800 aaKnown RBP6.5□□□□□ -1.37
TNFSF4-201ENST00000281834 CNOT8Q9UFF9 292 aaKnown RBP6.5□□□□□ -1.37
TNFSF4-201ENST00000281834 ANAPC7Q9UJX3 599 aa6.5□□□□□ -1.37
TNFSF4-201ENST00000281834 MAFGO15525 162 aa6.49□□□□□ -1.37
TNFSF4-201ENST00000281834 FARP2O94887 1054 aaPredicted RBP6.49□□□□□ -1.37
TNFSF4-201ENST00000281834 WEE2P0C1S8 567 aa6.49□□□□□ -1.37
TNFSF4-201ENST00000281834 TMEM253P0C7T8 217 aa6.49□□□□□ -1.37
TNFSF4-201ENST00000281834 PRLRP16471 622 aa6.49□□□□□ -1.37
TNFSF4-201ENST00000281834 YBX3P16989 372 aaKnown RBP eCLIP6.49□□□□□ -1.37
TNFSF4-201ENST00000281834 EPHB4P54760 987 aa6.49□□□□□ -1.37
TNFSF4-201ENST00000281834 GPC5P78333 572 aa6.49□□□□□ -1.37
TNFSF4-201ENST00000281834 TMEM62Q0P6H9 643 aa6.49□□□□□ -1.37
TNFSF4-201ENST00000281834 PAK2Q13177 524 aa6.49□□□□□ -1.37
TNFSF4-201ENST00000281834 GRM1Q13255 1194 aa6.49□□□□□ -1.37
TNFSF4-201ENST00000281834 BRDTQ58F21 947 aaPredicted RBP6.49□□□□□ -1.37
TNFSF4-201ENST00000281834 FAM182AQ5T1J6 154 aa6.49□□□□□ -1.37
TNFSF4-201ENST00000281834 ZNF516Q92618 1163 aa6.49□□□□□ -1.37
TNFSF4-201ENST00000281834 ARL8AQ96BM9 186 aa6.49□□□□□ -1.37
TNFSF4-201ENST00000281834 MTMR12Q9C0I1 747 aa6.49□□□□□ -1.37
TNFSF4-201ENST00000281834 NRBP2Q9NSY0 501 aa6.49□□□□□ -1.37
TNFSF4-201ENST00000281834 SNX24Q9Y343 169 aa6.49□□□□□ -1.37
TNFSF4-201ENST00000281834 SYNGAP1Q96PV0 1343 aa6.49□□□□□ -1.37
TNFSF4-201ENST00000281834 GSTTP1A0A1W2PQM5 241 aa6.49□□□□□ -1.37
TNFSF4-201ENST00000281834 TLDC2A0PJX2 215 aa6.49□□□□□ -1.37
TNFSF4-201ENST00000281834 B4GALT5O43286 388 aa6.49□□□□□ -1.37
TNFSF4-201ENST00000281834 SYF2O95926 243 aaKnown RBP6.49□□□□□ -1.37
TNFSF4-201ENST00000281834 MYCNP04198 464 aaPredicted RBP6.49□□□□□ -1.37
TNFSF4-201ENST00000281834 CD19P15391 556 aa6.49□□□□□ -1.37
TNFSF4-201ENST00000281834 PLTPP55058 493 aa6.49□□□□□ -1.37
TNFSF4-201ENST00000281834 FMO1Q01740 532 aa6.49□□□□□ -1.37
TNFSF4-201ENST00000281834 CAPSQ13938 189 aa6.49□□□□□ -1.37
TNFSF4-201ENST00000281834 CEP85LQ5SZL2 805 aa6.49□□□□□ -1.37
TNFSF4-201ENST00000281834 TDRD10Q5VZ19 366 aaKnown RBP6.49□□□□□ -1.37
TNFSF4-201ENST00000281834 LEKR1Q6ZMV7 388 aa6.49□□□□□ -1.37
TNFSF4-201ENST00000281834 CHST13Q8NET6 341 aa6.49□□□□□ -1.37
TNFSF4-201ENST00000281834 AFAP1L1Q8TED9 768 aa6.49□□□□□ -1.37
TNFSF4-201ENST00000281834 SEPT1Q8WYJ6 367 aa6.49□□□□□ -1.37
TNFSF4-201ENST00000281834 MAGOHBQ96A72 148 aaKnown RBP6.49□□□□□ -1.37
TNFSF4-201ENST00000281834 ACSF2Q96CM8 615 aaPredicted RBP6.49□□□□□ -1.37
TNFSF4-201ENST00000281834 C18orf8Q96DM3 657 aa6.49□□□□□ -1.37
TNFSF4-201ENST00000281834 CYFIP2Q96F07 1278 aa6.49□□□□□ -1.37
TNFSF4-201ENST00000281834 C12orf42Q96LP6 360 aa6.49□□□□□ -1.37
TNFSF4-201ENST00000281834 MMP19Q99542 508 aa6.49□□□□□ -1.37
TNFSF4-201ENST00000281834 SYT17Q9BSW7 474 aa6.49□□□□□ -1.37
TNFSF4-201ENST00000281834 HAPLN2Q9GZV7 340 aa6.49□□□□□ -1.37
TNFSF4-201ENST00000281834 ERVK-5Q9HDB9 667 aa6.49□□□□□ -1.37
TNFSF4-201ENST00000281834 GINM1Q9NU53 330 aa6.49□□□□□ -1.37
TNFSF4-201ENST00000281834 PNMA2Q9UL42 364 aa6.49□□□□□ -1.37
TNFSF4-201ENST00000281834 TCRBV7S2A1N4TA0A589 114 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms