RNA–Protein interactions for RNA: ENST00000268099.13

SCAMP2-201, Transcript of secretory carrier membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP2, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-201ENST00000268099 UBAP1LF5GYI3 381 aa16.46■□□□□ 0.23
SCAMP2-201ENST00000268099 LMNAP02545 664 aaKnown RBP16.46■□□□□ 0.23
SCAMP2-201ENST00000268099 TMEM63BQ5T3F8 832 aa16.46■□□□□ 0.23
SCAMP2-201ENST00000268099 CPNE8Q86YQ8 564 aa16.46■□□□□ 0.23
SCAMP2-201ENST00000268099 SLFN12Q8IYM2 578 aa16.46■□□□□ 0.23
SCAMP2-201ENST00000268099 ANKRD35Q8N283 1001 aa16.46■□□□□ 0.23
SCAMP2-201ENST00000268099 UCMAQ8WVF2 138 aa16.46■□□□□ 0.23
SCAMP2-201ENST00000268099 C1orf54Q8WWF1 131 aa16.46■□□□□ 0.23
SCAMP2-201ENST00000268099 TRIM4Q9C037 500 aa16.46■□□□□ 0.23
SCAMP2-201ENST00000268099 MROH7Q68CQ1 1323 aa16.46■□□□□ 0.23
SCAMP2-201ENST00000268099 TRAFD1O14545 582 aaPredicted RBP16.45■□□□□ 0.22
SCAMP2-201ENST00000268099 SPOPO43791 374 aa16.45■□□□□ 0.22
SCAMP2-201ENST00000268099 CBX6O95503 412 aa16.45■□□□□ 0.22
SCAMP2-201ENST00000268099 TRIM49P0CI25 452 aa16.45■□□□□ 0.22
SCAMP2-201ENST00000268099 TRIM49CP0CI26 452 aa16.45■□□□□ 0.22
SCAMP2-201ENST00000268099 SPATA31C1P0DKV0 1188 aa16.45■□□□□ 0.22
SCAMP2-201ENST00000268099 ITGA8P53708 1063 aa16.45■□□□□ 0.22
SCAMP2-201ENST00000268099 MYL7Q01449 175 aa16.45■□□□□ 0.22
SCAMP2-201ENST00000268099 SPIRE1Q08AE8 756 aa16.45■□□□□ 0.22
SCAMP2-201ENST00000268099 ERMNQ8TAM6 284 aa16.45■□□□□ 0.22
SCAMP2-201ENST00000268099 SPOCK2Q92563 424 aa16.45■□□□□ 0.22
SCAMP2-201ENST00000268099 KIFAP3Q92845 792 aa16.45■□□□□ 0.22
SCAMP2-201ENST00000268099 IFT43Q96FT9 208 aa16.45■□□□□ 0.22
SCAMP2-201ENST00000268099 STOML1Q9UBI4 398 aa16.45■□□□□ 0.22
SCAMP2-201ENST00000268099 TNRC6CQ9HCJ0 1690 aaKnown RBP16.45■□□□□ 0.22
SCAMP2-201ENST00000268099 RASA4BC9J798 803 aa16.45■□□□□ 0.22
SCAMP2-201ENST00000268099 TULP1O00294 542 aaPredicted RBP16.45■□□□□ 0.22
SCAMP2-201ENST00000268099 RASA4O43374 803 aa16.45■□□□□ 0.22
SCAMP2-201ENST00000268099 SNHG28P0DPA3 235 aa16.45■□□□□ 0.22
SCAMP2-201ENST00000268099 RPA1P27694 616 aa16.45■□□□□ 0.22
SCAMP2-201ENST00000268099 RXRBP28702 533 aa16.45■□□□□ 0.22
SCAMP2-201ENST00000268099 ITPK1Q13572 414 aa16.45■□□□□ 0.22
SCAMP2-201ENST00000268099 PHLDB3Q6NSJ2 640 aa16.45■□□□□ 0.22
SCAMP2-201ENST00000268099 LRRC8CQ8TDW0 803 aa16.45■□□□□ 0.22
SCAMP2-201ENST00000268099 LRCH1Q9Y2L9 728 aa16.45■□□□□ 0.22
SCAMP2-201ENST00000268099 SIGLEC16A6NMB1 481 aa16.44■□□□□ 0.22
SCAMP2-201ENST00000268099 CLDN3O15551 220 aa16.44■□□□□ 0.22
SCAMP2-201ENST00000268099 ATMINO43313 823 aaPredicted RBP16.44■□□□□ 0.22
SCAMP2-201ENST00000268099 MTA2O94776 668 aa16.44■□□□□ 0.22
SCAMP2-201ENST00000268099 ASMTLO95671 621 aa16.44■□□□□ 0.22
SCAMP2-201ENST00000268099 IVDP26440 423 aa16.44■□□□□ 0.22
SCAMP2-201ENST00000268099 VHLP40337 213 aa16.44■□□□□ 0.22
SCAMP2-201ENST00000268099 LLGL1Q15334 1064 aa16.44■□□□□ 0.22
SCAMP2-201ENST00000268099 SGO2Q562F6 1265 aa16.44■□□□□ 0.22
SCAMP2-201ENST00000268099 ZNF746Q6NUN9 644 aaPredicted RBP16.44■□□□□ 0.22
SCAMP2-201ENST00000268099 MKNK1Q9BUB5 465 aa16.44■□□□□ 0.22
SCAMP2-201ENST00000268099 RTFDC1Q9BY42 306 aaPredicted RBP16.44■□□□□ 0.22
SCAMP2-201ENST00000268099 TLE6Q9H808 572 aa16.44■□□□□ 0.22
SCAMP2-201ENST00000268099 SLCO1B3Q9NPD5 702 aa16.44■□□□□ 0.22
SCAMP2-201ENST00000268099 MTMR4Q9NYA4 1195 aa16.44■□□□□ 0.22
SCAMP2-201ENST00000268099 SCOCQ9UIL1 159 aa16.44■□□□□ 0.22
SCAMP2-201ENST00000268099 A0A1W2PRG0 241 aa16.44■□□□□ 0.22
SCAMP2-201ENST00000268099 ECE2O60344 883 aa16.44■□□□□ 0.22
SCAMP2-201ENST00000268099 LDHCP07864 332 aa16.44■□□□□ 0.22
SCAMP2-201ENST00000268099 MARK3P27448 753 aa16.44■□□□□ 0.22
SCAMP2-201ENST00000268099 SESN3P58005 492 aa16.44■□□□□ 0.22
SCAMP2-201ENST00000268099 LAMB3Q13751 1172 aa16.44■□□□□ 0.22
SCAMP2-201ENST00000268099 TMED2Q15363 201 aa16.44■□□□□ 0.22
SCAMP2-201ENST00000268099 RPUSD2Q8IZ73 545 aaKnown RBP16.44■□□□□ 0.22
SCAMP2-201ENST00000268099 DRAXINQ8NBI3 349 aaPredicted RBP16.44■□□□□ 0.22
SCAMP2-201ENST00000268099 PWWP2AQ96N64 755 aa16.44■□□□□ 0.22
SCAMP2-201ENST00000268099 OLFML3Q9NRN5 406 aa16.44■□□□□ 0.22
SCAMP2-201ENST00000268099 EURLQ9NYK6 297 aa16.44■□□□□ 0.22
SCAMP2-201ENST00000268099 IRS2Q9Y4H2 1338 aa16.44■□□□□ 0.22
SCAMP2-201ENST00000268099 ROBO1Q9Y6N7 1651 aa16.43■□□□□ 0.22
SCAMP2-201ENST00000268099 USP17L15C9J2P7 530 aa16.43■□□□□ 0.22
SCAMP2-201ENST00000268099 USP17L13C9JLJ4 530 aa16.43■□□□□ 0.22
SCAMP2-201ENST00000268099 USP17L11C9JVI0 530 aa16.43■□□□□ 0.22
SCAMP2-201ENST00000268099 USP17L18D6R9N7 530 aa16.43■□□□□ 0.22
SCAMP2-201ENST00000268099 USP17L22D6RA61 530 aa16.43■□□□□ 0.22
SCAMP2-201ENST00000268099 USP17L17D6RBQ6 530 aa16.43■□□□□ 0.22
SCAMP2-201ENST00000268099 USP17L19D6RCP7 530 aa16.43■□□□□ 0.22
SCAMP2-201ENST00000268099 USP17L20D6RJB6 530 aa16.43■□□□□ 0.22
SCAMP2-201ENST00000268099 PTPN4P29074 926 aa16.43■□□□□ 0.22
SCAMP2-201ENST00000268099 BTDP43251 543 aa16.43■□□□□ 0.22
SCAMP2-201ENST00000268099 EIF6P56537 245 aaKnown RBP16.43■□□□□ 0.22
SCAMP2-201ENST00000268099 CAV1Q03135 178 aa16.43■□□□□ 0.22
SCAMP2-201ENST00000268099 USP17L24Q0WX57 530 aa16.43■□□□□ 0.22
SCAMP2-201ENST00000268099 PTK6Q13882 451 aa16.43■□□□□ 0.22
SCAMP2-201ENST00000268099 COG2Q14746 738 aa16.43■□□□□ 0.22
SCAMP2-201ENST00000268099 NFIL3Q16649 462 aa16.43■□□□□ 0.22
SCAMP2-201ENST00000268099 USP17L6PQ6QN14 398 aa16.43■□□□□ 0.22
SCAMP2-201ENST00000268099 CLEC10AQ8IUN9 316 aa16.43■□□□□ 0.22
SCAMP2-201ENST00000268099 PHC3Q8NDX5 983 aa16.43■□□□□ 0.22
SCAMP2-201ENST00000268099 C10orf82Q8WW14 230 aa16.43■□□□□ 0.22
SCAMP2-201ENST00000268099 BTBD6Q96KE9 485 aa16.43■□□□□ 0.22
SCAMP2-201ENST00000268099 TRAPPC9Q96Q05 1148 aa16.43■□□□□ 0.22
SCAMP2-201ENST00000268099 CCDC77Q9BR77 488 aa16.43■□□□□ 0.22
SCAMP2-201ENST00000268099 BHMT2Q9H2M3 363 aa16.43■□□□□ 0.22
SCAMP2-201ENST00000268099 RGL1Q9NZL6 768 aa16.43■□□□□ 0.22
SCAMP2-201ENST00000268099 ANAPC5Q9UJX4 755 aa16.43■□□□□ 0.22
SCAMP2-201ENST00000268099 CYP3A7-CYP3A51PA0A087WV96 503 aa16.43■□□□□ 0.22
SCAMP2-201ENST00000268099 SFI1A8K8P3 1242 aa16.43■□□□□ 0.22
SCAMP2-201ENST00000268099 EIF3DO15371 548 aaKnown RBP eCLIP16.43■□□□□ 0.22
SCAMP2-201ENST00000268099 SPAG7O75391 227 aa16.43■□□□□ 0.22
SCAMP2-201ENST00000268099 RNF8O76064 485 aa16.43■□□□□ 0.22
SCAMP2-201ENST00000268099 CYP3A7P24462 503 aa16.43■□□□□ 0.22
SCAMP2-201ENST00000268099 SSR1P43307 286 aaKnown RBP16.43■□□□□ 0.22
SCAMP2-201ENST00000268099 POLE2P56282 527 aa16.43■□□□□ 0.22
SCAMP2-201ENST00000268099 ZNF543Q08ER8 600 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms