RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 DYDC2Q96IM9 177 aa7.71□□□□□ -1.18
CSDE1-201ENST00000261443 TUBGCP5Q96RT8 1024 aa7.71□□□□□ -1.18
CSDE1-201ENST00000261443 ZSWIM1Q9BR11 485 aa7.71□□□□□ -1.18
CSDE1-201ENST00000261443 CCDC77Q9BR77 488 aa7.71□□□□□ -1.18
CSDE1-201ENST00000261443 MIS12Q9H081 205 aa7.71□□□□□ -1.18
CSDE1-201ENST00000261443 ASCC2Q9H1I8 757 aaPredicted RBP7.71□□□□□ -1.18
CSDE1-201ENST00000261443 UBN1Q9NPG3 1134 aa7.71□□□□□ -1.18
CSDE1-201ENST00000261443 DCP1AQ9NPI6 582 aaPredicted RBP7.71□□□□□ -1.18
CSDE1-201ENST00000261443 IL17RBQ9NRM6 502 aa7.71□□□□□ -1.18
CSDE1-201ENST00000261443 WHRNQ9P202 907 aa7.71□□□□□ -1.18
CSDE1-201ENST00000261443 ASAP1Q9ULH1 1129 aa7.71□□□□□ -1.18
CSDE1-201ENST00000261443 PCDHA2Q9Y5H9 948 aa7.71□□□□□ -1.18
CSDE1-201ENST00000261443 ACTL7BQ9Y614 415 aa7.71□□□□□ -1.18
CSDE1-201ENST00000261443 hCG_2014768A0A024R1R8 64 aa7.71□□□□□ -1.18
CSDE1-201ENST00000261443 KLRF2D3W0D1 207 aa7.71□□□□□ -1.18
CSDE1-201ENST00000261443 HNRNPRO43390 633 aaKnown RBP7.71□□□□□ -1.18
CSDE1-201ENST00000261443 EXOC3O60645 756 aa7.71□□□□□ -1.18
CSDE1-201ENST00000261443 TCEA3O75764 348 aa7.71□□□□□ -1.18
CSDE1-201ENST00000261443 TDP2O95551 362 aa7.71□□□□□ -1.18
CSDE1-201ENST00000261443 ASMTLO95671 621 aa7.71□□□□□ -1.18
CSDE1-201ENST00000261443 KRT18P05783 430 aaKnown RBP7.71□□□□□ -1.18
CSDE1-201ENST00000261443 ABCD1P33897 745 aa7.71□□□□□ -1.18
CSDE1-201ENST00000261443 SOX5P35711 763 aa7.71□□□□□ -1.18
CSDE1-201ENST00000261443 CCNFP41002 786 aa7.71□□□□□ -1.18
CSDE1-201ENST00000261443 NEK3P51956 506 aa7.71□□□□□ -1.18
CSDE1-201ENST00000261443 KRT17Q04695 432 aa7.71□□□□□ -1.18
CSDE1-201ENST00000261443 MTA1Q13330 715 aa7.71□□□□□ -1.18
CSDE1-201ENST00000261443 SH2D4BQ5SQS7 431 aa7.71□□□□□ -1.18
CSDE1-201ENST00000261443 DAB2IPQ5VWQ8 1189 aa7.71□□□□□ -1.18
CSDE1-201ENST00000261443 CLNKQ7Z7G1 428 aa7.71□□□□□ -1.18
CSDE1-201ENST00000261443 SCYL3Q8IZE3 742 aa7.71□□□□□ -1.18
CSDE1-201ENST00000261443 STKLD1Q8NE28 680 aa7.71□□□□□ -1.18
CSDE1-201ENST00000261443 CCDC28BQ9BUN5 200 aa7.71□□□□□ -1.18
CSDE1-201ENST00000261443 KRT82Q9NSB4 513 aa7.71□□□□□ -1.18
CSDE1-201ENST00000261443 TAS2R14Q9NYV8 317 aa7.71□□□□□ -1.18
CSDE1-201ENST00000261443 CICQ96RK0 1608 aaPredicted RBP7.7□□□□□ -1.18
CSDE1-201ENST00000261443 ANKRD62A6NC57 917 aa7.7□□□□□ -1.18
CSDE1-201ENST00000261443 GSC2O15499 205 aa7.7□□□□□ -1.18
CSDE1-201ENST00000261443 MARCH6O60337 910 aa7.7□□□□□ -1.18
CSDE1-201ENST00000261443 ZWINTO95229 277 aa7.7□□□□□ -1.18
CSDE1-201ENST00000261443 SPATA31D3P0C874 917 aa7.7□□□□□ -1.18
CSDE1-201ENST00000261443 ITIH2P19823 946 aa7.7□□□□□ -1.18
CSDE1-201ENST00000261443 CDK7P50613 346 aa7.7□□□□□ -1.18
CSDE1-201ENST00000261443 INHBCP55103 352 aa7.7□□□□□ -1.18
CSDE1-201ENST00000261443 UBE4AQ14139 1066 aa7.7□□□□□ -1.18
CSDE1-201ENST00000261443 MAP7Q14244 749 aa7.7□□□□□ -1.18
CSDE1-201ENST00000261443 CYP1B1Q16678 543 aa7.7□□□□□ -1.18
CSDE1-201ENST00000261443 RBM26Q5T8P6 1007 aaKnown RBP7.7□□□□□ -1.18
CSDE1-201ENST00000261443 PHLDB3Q6NSJ2 640 aa7.7□□□□□ -1.18
CSDE1-201ENST00000261443 SPATA31D4Q6ZUB0 917 aa7.7□□□□□ -1.18
CSDE1-201ENST00000261443 CADPS2Q86UW7 1296 aa7.7□□□□□ -1.18
CSDE1-201ENST00000261443 GPBP1Q86WP2 473 aa7.7□□□□□ -1.18
CSDE1-201ENST00000261443 TRIM42Q8IWZ5 723 aa7.7□□□□□ -1.18
CSDE1-201ENST00000261443 RHOT2Q8IXI1 618 aa7.7□□□□□ -1.18
CSDE1-201ENST00000261443 OLFM3Q96PB7 478 aa7.7□□□□□ -1.18
CSDE1-201ENST00000261443 IWS1Q96ST2 819 aa7.7□□□□□ -1.18
CSDE1-201ENST00000261443 CRNKL1Q9BZJ0 848 aaKnown RBP7.7□□□□□ -1.18
CSDE1-201ENST00000261443 NPHS2Q9NP85 383 aa7.7□□□□□ -1.18
CSDE1-201ENST00000261443 ETNK2Q9NVF9 386 aa7.7□□□□□ -1.18
CSDE1-201ENST00000261443 NINJ2Q9NZG7 142 aa7.7□□□□□ -1.18
CSDE1-201ENST00000261443 GMEB1Q9Y692 573 aa7.7□□□□□ -1.18
CSDE1-201ENST00000261443 PYGMP11217 842 aa7.7□□□□□ -1.18
CSDE1-201ENST00000261443 GYG1P46976 350 aa7.7□□□□□ -1.18
CSDE1-201ENST00000261443 MESDQ14696 234 aa7.7□□□□□ -1.18
CSDE1-201ENST00000261443 PDK4Q16654 411 aa7.7□□□□□ -1.18
CSDE1-201ENST00000261443 FYB2Q5VWT5 728 aa7.7□□□□□ -1.18
CSDE1-201ENST00000261443 SPTY2D1Q68D10 685 aaPredicted RBP7.7□□□□□ -1.18
CSDE1-201ENST00000261443 RNF207Q6ZRF8 634 aa7.7□□□□□ -1.18
CSDE1-201ENST00000261443 SLC13A5Q86YT5 568 aaPredicted RBP7.7□□□□□ -1.18
CSDE1-201ENST00000261443 DNAJC10Q8IXB1 793 aa7.7□□□□□ -1.18
CSDE1-201ENST00000261443 ST13P4Q8IZP2 240 aaPredicted RBP7.7□□□□□ -1.18
CSDE1-201ENST00000261443 PDCD7Q8N8D1 485 aaKnown RBP7.7□□□□□ -1.18
CSDE1-201ENST00000261443 WDR60Q8WVS4 1066 aa7.7□□□□□ -1.18
CSDE1-201ENST00000261443 PIGBQ92521 554 aa7.7□□□□□ -1.18
CSDE1-201ENST00000261443 VAT1LQ9HCJ6 419 aa7.7□□□□□ -1.18
CSDE1-201ENST00000261443 DDX43Q9NXZ2 648 aaKnown RBP7.7□□□□□ -1.18
CSDE1-201ENST00000261443 IL1RAPL1Q9NZN1 696 aa7.7□□□□□ -1.18
CSDE1-201ENST00000261443 WASF2Q9Y6W5 498 aa7.7□□□□□ -1.18
CSDE1-201ENST00000261443 DOT1LQ8TEK3 1739 aa7.7□□□□□ -1.18
CSDE1-201ENST00000261443 UMODL1Q5DID0 1318 aa7.7□□□□□ -1.18
CSDE1-201ENST00000261443 CFAP69A5D8W1 941 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 USP17L3A6NCW0 530 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 USP17L4A6NCW7 530 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 E9PMD0 336 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 C2CD2LO14523 706 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 TP73O15350 636 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 CHRNB2P17787 502 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 COMTP21964 271 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 ITGA8P53708 1063 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 BPIFB4P59827 614 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 THOC5Q13769 683 aaKnown RBP7.69□□□□□ -1.18
CSDE1-201ENST00000261443 DRAP1Q14919 205 aaPredicted RBP7.69□□□□□ -1.18
CSDE1-201ENST00000261443 CTC1Q2NKJ3 1217 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 CFAP157Q5JU67 520 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 TMEM63BQ5T3F8 832 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 C11orf63Q6NUN7 778 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 RHBDF2Q6PJF5 856 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 IZUMO2Q6UXV1 221 aa7.69□□□□□ -1.18
CSDE1-201ENST00000261443 MARK2Q7KZI7 788 aaKnown RBP7.69□□□□□ -1.18
CSDE1-201ENST00000261443 USP17L1Q7RTZ2 530 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms