RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 ZBTB42B2RXF5 422 aa12.06□□□□□ -0.48
TNFAIP3-201ENST00000237289 TSPAN1O60635 241 aa12.06□□□□□ -0.48
TNFAIP3-201ENST00000237289 AKAP5P24588 427 aa12.06□□□□□ -0.48
TNFAIP3-201ENST00000237289 GCLMP48507 274 aa12.06□□□□□ -0.48
TNFAIP3-201ENST00000237289 NKX3-2P78367 333 aa12.06□□□□□ -0.48
TNFAIP3-201ENST00000237289 MKRN4PQ13434 485 aaPredicted RBP12.06□□□□□ -0.48
TNFAIP3-201ENST00000237289 RAPGEF1Q13905 1077 aa12.06□□□□□ -0.48
TNFAIP3-201ENST00000237289 BPIFA3Q9BQP9 254 aa12.06□□□□□ -0.48
TNFAIP3-201ENST00000237289 CRACR2AQ9BSW2 395 aa12.06□□□□□ -0.48
TNFAIP3-201ENST00000237289 PDLIM7Q9NR12 457 aa12.06□□□□□ -0.48
TNFAIP3-201ENST00000237289 KANSL3Q9P2N6 904 aa12.06□□□□□ -0.48
TNFAIP3-201ENST00000237289 TRAF3IP3Q9Y228 551 aa12.06□□□□□ -0.48
TNFAIP3-201ENST00000237289 SQORQ9Y6N5 450 aa12.06□□□□□ -0.48
TNFAIP3-201ENST00000237289 PAN2Q504Q3 1202 aaKnown RBP12.05□□□□□ -0.48
TNFAIP3-201ENST00000237289 EEF1DP3Q658K8 133 aa12.05□□□□□ -0.48
TNFAIP3-201ENST00000237289 PSRC1Q6PGN9 363 aaPredicted RBP12.05□□□□□ -0.48
TNFAIP3-201ENST00000237289 DSTYKQ6XUX3 929 aa12.05□□□□□ -0.48
TNFAIP3-201ENST00000237289 TMC6Q7Z403 805 aa12.05□□□□□ -0.48
TNFAIP3-201ENST00000237289 FAM228AQ86W67 206 aa12.05□□□□□ -0.48
TNFAIP3-201ENST00000237289 CDHR5Q9HBB8 845 aa12.05□□□□□ -0.48
TNFAIP3-201ENST00000237289 AGPAT5Q9NUQ2 364 aa12.05□□□□□ -0.48
TNFAIP3-201ENST00000237289 SLC4A7Q9Y6M7 1214 aa12.05□□□□□ -0.48
TNFAIP3-201ENST00000237289 CNTNAP2Q9UHC6 1331 aa12.05□□□□□ -0.48
TNFAIP3-201ENST00000237289 PFKMP08237 780 aa12.05□□□□□ -0.48
TNFAIP3-201ENST00000237289 COPB1P53618 953 aaKnown RBP12.05□□□□□ -0.48
TNFAIP3-201ENST00000237289 YWHAEP62258 255 aaKnown RBP12.05□□□□□ -0.48
TNFAIP3-201ENST00000237289 EXOC3L4Q17RC7 722 aa12.05□□□□□ -0.48
TNFAIP3-201ENST00000237289 TCP11X2Q5H9J9 407 aa12.05□□□□□ -0.48
TNFAIP3-201ENST00000237289 DPH6Q7L8W6 267 aa12.05□□□□□ -0.48
TNFAIP3-201ENST00000237289 ANKRD33Q7Z3H0 272 aa12.05□□□□□ -0.48
TNFAIP3-201ENST00000237289 CBWD2Q8IUF1 395 aa12.05□□□□□ -0.48
TNFAIP3-201ENST00000237289 SPATA20Q8TB22 786 aa12.05□□□□□ -0.48
TNFAIP3-201ENST00000237289 CDT1Q9H211 546 aa12.05□□□□□ -0.48
TNFAIP3-201ENST00000237289 TBKBP1A7MCY6 615 aa12.05□□□□□ -0.48
TNFAIP3-201ENST00000237289 TIMP1P01033 207 aa12.05□□□□□ -0.48
TNFAIP3-201ENST00000237289 CD4P01730 458 aa12.05□□□□□ -0.48
TNFAIP3-201ENST00000237289 THP07101 528 aa12.05□□□□□ -0.48
TNFAIP3-201ENST00000237289 LMBRD2Q68DH5 695 aaPredicted RBP12.05□□□□□ -0.48
TNFAIP3-201ENST00000237289 METTL23Q86XA0 190 aa12.05□□□□□ -0.48
TNFAIP3-201ENST00000237289 MINDY3Q9H8M7 445 aa12.05□□□□□ -0.48
TNFAIP3-201ENST00000237289 IFT122Q9HBG6 1241 aa12.05□□□□□ -0.48
TNFAIP3-201ENST00000237289 PDE11AQ9HCR9 933 aa12.05□□□□□ -0.48
TNFAIP3-201ENST00000237289 AAASQ9NRG9 546 aa12.05□□□□□ -0.48
TNFAIP3-201ENST00000237289 CHRNA1P02708 482 aa12.04□□□□□ -0.48
TNFAIP3-201ENST00000237289 TRIM49P0CI25 452 aa12.04□□□□□ -0.48
TNFAIP3-201ENST00000237289 TRIM49CP0CI26 452 aa12.04□□□□□ -0.48
TNFAIP3-201ENST00000237289 GLRA4Q5JXX5 417 aa12.04□□□□□ -0.48
TNFAIP3-201ENST00000237289 CNKSR3Q6P9H4 555 aa12.04□□□□□ -0.48
TNFAIP3-201ENST00000237289 VPS36Q86VN1 386 aa12.04□□□□□ -0.48
TNFAIP3-201ENST00000237289 NT5C1BQ96P26 610 aa12.04□□□□□ -0.48
TNFAIP3-201ENST00000237289 NXF1Q9UBU9 619 aaKnown RBP12.04□□□□□ -0.48
TNFAIP3-201ENST00000237289 UBQLN1Q9UMX0 589 aaKnown RBP12.04□□□□□ -0.48
TNFAIP3-201ENST00000237289 HES2Q9Y543 173 aa12.04□□□□□ -0.48
TNFAIP3-201ENST00000237289 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.04□□□□□ -0.48
TNFAIP3-201ENST00000237289 TISP43B9A030 160 aa12.04□□□□□ -0.48
TNFAIP3-201ENST00000237289 GPR32O75388 356 aa12.04□□□□□ -0.48
TNFAIP3-201ENST00000237289 CXCL8P10145 99 aa12.04□□□□□ -0.48
TNFAIP3-201ENST00000237289 KRT5P13647 590 aa12.04□□□□□ -0.48
TNFAIP3-201ENST00000237289 CSF2RAP15509 400 aa12.04□□□□□ -0.48
TNFAIP3-201ENST00000237289 FAAP100Q0VG06 881 aa12.04□□□□□ -0.48
TNFAIP3-201ENST00000237289 BFSP1Q12934 665 aa12.04□□□□□ -0.48
TNFAIP3-201ENST00000237289 BTG3Q14201 252 aaPredicted RBP12.04□□□□□ -0.48
TNFAIP3-201ENST00000237289 LPIN1Q14693 890 aa12.04□□□□□ -0.48
TNFAIP3-201ENST00000237289 BMT2Q1RMZ1 405 aa12.04□□□□□ -0.48
TNFAIP3-201ENST00000237289 KRT39Q6A163 491 aa12.04□□□□□ -0.48
TNFAIP3-201ENST00000237289 UBE2OQ9C0C9 1292 aaKnown RBP12.04□□□□□ -0.48
TNFAIP3-201ENST00000237289 ADAMTS10Q9H324 1103 aa12.04□□□□□ -0.48
TNFAIP3-201ENST00000237289 GRIN2DO15399 1336 aa12.04□□□□□ -0.48
TNFAIP3-201ENST00000237289 OR1G1P47890 313 aa12.04□□□□□ -0.48
TNFAIP3-201ENST00000237289 ALDH7A1P49419 539 aaKnown RBP12.04□□□□□ -0.48
TNFAIP3-201ENST00000237289 CDCA2Q69YH5 1023 aaPredicted RBP12.04□□□□□ -0.48
TNFAIP3-201ENST00000237289 PPM1KQ8N3J5 372 aa12.04□□□□□ -0.48
TNFAIP3-201ENST00000237289 NDST4Q9H3R1 872 aa12.04□□□□□ -0.48
TNFAIP3-201ENST00000237289 RECQL4O94761 1208 aa12.04□□□□□ -0.48
TNFAIP3-201ENST00000237289 ADCY5O95622 1261 aa12.04□□□□□ -0.48
TNFAIP3-201ENST00000237289 KCNH2Q12809 1159 aa12.04□□□□□ -0.48
TNFAIP3-201ENST00000237289 TDRD12Q587J7 1177 aaKnown RBP12.04□□□□□ -0.48
TNFAIP3-201ENST00000237289 MFSD5Q6N075 450 aa12.04□□□□□ -0.48
TNFAIP3-201ENST00000237289 MICAL1Q8TDZ2 1067 aa12.04□□□□□ -0.48
TNFAIP3-201ENST00000237289 BADQ92934 168 aa12.04□□□□□ -0.48
TNFAIP3-201ENST00000237289 MRPL9Q9BYD2 267 aaKnown RBP12.04□□□□□ -0.48
TNFAIP3-201ENST00000237289 FGFBP2Q9BYJ0 223 aa12.04□□□□□ -0.48
TNFAIP3-201ENST00000237289 MYH9P35579 1960 aaKnown RBP12.03□□□□□ -0.48
TNFAIP3-201ENST00000237289 ABHD14A-ACY1A0A1B0GW23 586 aa12.03□□□□□ -0.48
TNFAIP3-201ENST00000237289 CDK7P50613 346 aa12.03□□□□□ -0.48
TNFAIP3-201ENST00000237289 VWA3BQ502W6 1294 aa12.03□□□□□ -0.48
TNFAIP3-201ENST00000237289 ZNF667Q5HYK9 610 aa12.03□□□□□ -0.48
TNFAIP3-201ENST00000237289 TTI2Q6NXR4 508 aa12.03□□□□□ -0.48
TNFAIP3-201ENST00000237289 ZNF560Q96MR9 790 aa12.03□□□□□ -0.48
TNFAIP3-201ENST00000237289 GAD1Q99259 594 aa12.03□□□□□ -0.48
TNFAIP3-201ENST00000237289 A0A1B0GUA9 196 aa12.03□□□□□ -0.48
TNFAIP3-201ENST00000237289 TRAPPC3O43617 180 aa12.03□□□□□ -0.48
TNFAIP3-201ENST00000237289 TADA2AO75478 443 aa12.03□□□□□ -0.48
TNFAIP3-201ENST00000237289 RBP5P82980 135 aa12.03□□□□□ -0.48
TNFAIP3-201ENST00000237289 FAM187BQ17R55 369 aa12.03□□□□□ -0.48
TNFAIP3-201ENST00000237289 FMNL3Q8IVF7 1028 aa12.03□□□□□ -0.48
TNFAIP3-201ENST00000237289 LSM14BQ9BX40 385 aaKnown RBP12.03□□□□□ -0.48
TNFAIP3-201ENST00000237289 PDZD7Q9H5P4 517 aa12.03□□□□□ -0.48
TNFAIP3-201ENST00000237289 IPPQ9Y573 584 aa12.03□□□□□ -0.48
TNFAIP3-201ENST00000237289 ADGRA3Q8IWK6 1321 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms