RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 C16orf87Q6PH81 154 aa11.73□□□□□ -0.53
KNOP1-201ENST00000219837 ZC3H18Q86VM9 953 aaKnown RBP11.73□□□□□ -0.53
KNOP1-201ENST00000219837 ANKMY2Q8IV38 441 aa11.73□□□□□ -0.53
KNOP1-201ENST00000219837 SH3BP1Q9Y3L3 701 aa11.73□□□□□ -0.53
KNOP1-201ENST00000219837 HSPA1AP0DMV8 641 aaKnown RBP11.73□□□□□ -0.53
KNOP1-201ENST00000219837 HSPA1BP0DMV9 641 aaKnown RBP11.73□□□□□ -0.53
KNOP1-201ENST00000219837 AKT1P31749 480 aa11.73□□□□□ -0.53
KNOP1-201ENST00000219837 SPDYAQ5MJ70 313 aa11.73□□□□□ -0.53
KNOP1-201ENST00000219837 IL31Q6EBC2 164 aa11.73□□□□□ -0.53
KNOP1-201ENST00000219837 SP8Q8IXZ3 490 aa11.73□□□□□ -0.53
KNOP1-201ENST00000219837 ASAP3Q8TDY4 903 aa11.73□□□□□ -0.53
KNOP1-201ENST00000219837 SYTL2Q9HCH5 934 aa11.73□□□□□ -0.53
KNOP1-201ENST00000219837 MLXIPLQ9NP71 852 aa11.73□□□□□ -0.53
KNOP1-201ENST00000219837 AP3M2P53677 418 aa11.73□□□□□ -0.53
KNOP1-201ENST00000219837 CDH6P55285 790 aa11.73□□□□□ -0.53
KNOP1-201ENST00000219837 SNAPC2Q13487 334 aa11.73□□□□□ -0.53
KNOP1-201ENST00000219837 UNC45AQ9H3U1 944 aa11.73□□□□□ -0.53
KNOP1-201ENST00000219837 ECT2Q9H8V3 914 aa11.73□□□□□ -0.53
KNOP1-201ENST00000219837 DCP1AQ9NPI6 582 aaPredicted RBP11.73□□□□□ -0.53
KNOP1-201ENST00000219837 LGALS16A8MUM7 142 aa11.73□□□□□ -0.53
KNOP1-201ENST00000219837 F5H6K3 240 aa11.73□□□□□ -0.53
KNOP1-201ENST00000219837 SKIP12755 728 aa11.73□□□□□ -0.53
KNOP1-201ENST00000219837 KLRC3Q07444 240 aa11.73□□□□□ -0.53
KNOP1-201ENST00000219837 SDE2Q6IQ49 451 aa11.73□□□□□ -0.53
KNOP1-201ENST00000219837 C1orf54Q8WWF1 131 aa11.73□□□□□ -0.53
KNOP1-201ENST00000219837 TDP2O95551 362 aa11.73□□□□□ -0.53
KNOP1-201ENST00000219837 CASP8Q14790 479 aa11.73□□□□□ -0.53
KNOP1-201ENST00000219837 SLC9A5Q14940 896 aa11.73□□□□□ -0.53
KNOP1-201ENST00000219837 FAM47EQ6ZV65 393 aa11.73□□□□□ -0.53
KNOP1-201ENST00000219837 ADCY10Q96PN6 1610 aa11.73□□□□□ -0.53
KNOP1-201ENST00000219837 MIF4GDA9UHW6 222 aaKnown RBP11.72□□□□□ -0.53
KNOP1-201ENST00000219837 TFRCP02786 760 aaKnown RBP11.72□□□□□ -0.53
KNOP1-201ENST00000219837 EIF3EP60228 445 aaKnown RBP11.72□□□□□ -0.53
KNOP1-201ENST00000219837 DAB2P98082 770 aa11.72□□□□□ -0.53
KNOP1-201ENST00000219837 MDH1BQ5I0G3 518 aa11.72□□□□□ -0.53
KNOP1-201ENST00000219837 TBC1D1Q86TI0 1168 aaPredicted RBP11.72□□□□□ -0.53
KNOP1-201ENST00000219837 LDHDQ86WU2 507 aa11.72□□□□□ -0.53
KNOP1-201ENST00000219837 TMEM143Q96AN5 459 aa11.72□□□□□ -0.53
KNOP1-201ENST00000219837 TNIP3Q96KP6 325 aa11.72□□□□□ -0.53
KNOP1-201ENST00000219837 FAM96AQ9H5X1 160 aa11.72□□□□□ -0.53
KNOP1-201ENST00000219837 AIPL1Q9NZN9 384 aa11.72□□□□□ -0.53
KNOP1-201ENST00000219837 PP2D1A8MPX8 630 aa11.72□□□□□ -0.53
KNOP1-201ENST00000219837 ATP1A3P13637 1013 aa11.72□□□□□ -0.53
KNOP1-201ENST00000219837 CENPAP49450 140 aa11.72□□□□□ -0.53
KNOP1-201ENST00000219837 TAF1CQ15572 869 aaPredicted RBP11.72□□□□□ -0.53
KNOP1-201ENST00000219837 DUOXA2Q1HG44 320 aa11.72□□□□□ -0.53
KNOP1-201ENST00000219837 KIZQ2M2Z5 673 aa11.72□□□□□ -0.53
KNOP1-201ENST00000219837 PDXDC1Q6P996 788 aa11.72□□□□□ -0.53
KNOP1-201ENST00000219837 RRM2BQ7LG56 351 aa11.72□□□□□ -0.53
KNOP1-201ENST00000219837 ATPAF2Q8N5M1 289 aa11.72□□□□□ -0.53
KNOP1-201ENST00000219837 KDM6BO15054 1643 aa11.72□□□□□ -0.53
KNOP1-201ENST00000219837 SNAP23O00161 211 aa11.72□□□□□ -0.53
KNOP1-201ENST00000219837 HMOX2P30519 316 aa11.72□□□□□ -0.53
KNOP1-201ENST00000219837 RGS7P49802 495 aa11.72□□□□□ -0.53
KNOP1-201ENST00000219837 TMEM132DQ14C87 1099 aa11.72□□□□□ -0.53
KNOP1-201ENST00000219837 CCDC85BQ15834 202 aaPredicted RBP11.72□□□□□ -0.53
KNOP1-201ENST00000219837 TGS1Q96RS0 853 aaKnown RBP11.72□□□□□ -0.53
KNOP1-201ENST00000219837 WARS2Q9UGM6 360 aaKnown RBP11.72□□□□□ -0.53
KNOP1-201ENST00000219837 SPATA31A3Q5VYP0 1347 aa11.72□□□□□ -0.53
KNOP1-201ENST00000219837 ZBTB17Q13105 803 aa11.72□□□□□ -0.53
KNOP1-201ENST00000219837 NECTIN1Q15223 517 aa11.72□□□□□ -0.53
KNOP1-201ENST00000219837 PCSK7Q16549 785 aa11.72□□□□□ -0.53
KNOP1-201ENST00000219837 NFRKBQ6P4R8 1299 aa11.72□□□□□ -0.53
KNOP1-201ENST00000219837 RFX8Q6ZV50 586 aa11.72□□□□□ -0.53
KNOP1-201ENST00000219837 PID1Q7Z2X4 250 aa11.72□□□□□ -0.53
KNOP1-201ENST00000219837 RPAINQ86UA6 219 aa11.72□□□□□ -0.53
KNOP1-201ENST00000219837 PPP2R3CQ969Q6 453 aa11.72□□□□□ -0.53
KNOP1-201ENST00000219837 FOPNLQ96NB1 174 aa11.72□□□□□ -0.53
KNOP1-201ENST00000219837 PARK7Q99497 189 aaKnown RBP11.72□□□□□ -0.53
KNOP1-201ENST00000219837 GPBP1L1Q9HC44 474 aaPredicted RBP11.72□□□□□ -0.53
KNOP1-201ENST00000219837 TUFT1Q9NNX1 390 aa11.72□□□□□ -0.53
KNOP1-201ENST00000219837 KIF28PB7ZC32 967 aa11.72□□□□□ -0.53
KNOP1-201ENST00000219837 CCDC188H7C350 402 aa11.72□□□□□ -0.53
KNOP1-201ENST00000219837 TRAPPC3O43617 180 aa11.72□□□□□ -0.53
KNOP1-201ENST00000219837 CYP19A1P11511 503 aaPredicted RBP11.72□□□□□ -0.53
KNOP1-201ENST00000219837 GUCY2CP25092 1073 aa11.72□□□□□ -0.53
KNOP1-201ENST00000219837 CDC27P30260 824 aa11.72□□□□□ -0.53
KNOP1-201ENST00000219837 ARSEP51690 589 aa11.72□□□□□ -0.53
KNOP1-201ENST00000219837 BCAR1P56945 870 aa11.72□□□□□ -0.53
KNOP1-201ENST00000219837 DEUP1Q05D60 604 aa11.72□□□□□ -0.53
KNOP1-201ENST00000219837 NUDCD3Q8IVD9 361 aa11.72□□□□□ -0.53
KNOP1-201ENST00000219837 TTC39CQ8N584 583 aa11.72□□□□□ -0.53
KNOP1-201ENST00000219837 STKLD1Q8NE28 680 aa11.72□□□□□ -0.53
KNOP1-201ENST00000219837 DCTN4Q9UJW0 460 aa11.72□□□□□ -0.53
KNOP1-201ENST00000219837 GH1P01241 217 aa11.71□□□□□ -0.53
KNOP1-201ENST00000219837 STAT5BP51692 787 aa11.71□□□□□ -0.53
KNOP1-201ENST00000219837 KRT17Q04695 432 aa11.71□□□□□ -0.53
KNOP1-201ENST00000219837 TRIM72Q6ZMU5 477 aa11.71□□□□□ -0.53
KNOP1-201ENST00000219837 RHOT1Q8IXI2 618 aa11.71□□□□□ -0.53
KNOP1-201ENST00000219837 OTUB1Q96FW1 271 aaPredicted RBP11.71□□□□□ -0.53
KNOP1-201ENST00000219837 DACH2Q96NX9 599 aa11.71□□□□□ -0.53
KNOP1-201ENST00000219837 MXD3Q9BW11 206 aa11.71□□□□□ -0.53
KNOP1-201ENST00000219837 TNS3Q68CZ2 1445 aa11.71□□□□□ -0.53
KNOP1-201ENST00000219837 ITGA4P13612 1032 aa11.71□□□□□ -0.53
KNOP1-201ENST00000219837 PDCLQ13371 301 aa11.71□□□□□ -0.53
KNOP1-201ENST00000219837 NCAPHQ15003 741 aa11.71□□□□□ -0.53
KNOP1-201ENST00000219837 MGAT5BQ3V5L5 792 aa11.71□□□□□ -0.53
KNOP1-201ENST00000219837 TEDDM1Q5T9Z0 273 aa11.71□□□□□ -0.53
KNOP1-201ENST00000219837 CPA5Q8WXQ8 436 aa11.71□□□□□ -0.53
KNOP1-201ENST00000219837 HPS4Q9NQG7 708 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms