RNA–Protein interactions for RNA: ENST00000016946.7

RGPD5-201, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD5, Length 7,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-201ENST00000016946 SLCO1A2P46721 670 aa11.78□□□□□ -0.52
RGPD5-201ENST00000016946 DACT2Q5SW24 774 aa11.78□□□□□ -0.52
RGPD5-201ENST00000016946 WHAMMQ8TF30 809 aa11.78□□□□□ -0.52
RGPD5-201ENST00000016946 TMEM169Q96HH4 297 aa11.78□□□□□ -0.52
RGPD5-201ENST00000016946 RPLP2P05387 115 aaKnown RBP11.77□□□□□ -0.52
RGPD5-201ENST00000016946 SKIP12755 728 aa11.77□□□□□ -0.52
RGPD5-201ENST00000016946 CDH6P55285 790 aa11.77□□□□□ -0.52
RGPD5-201ENST00000016946 ZC2HC1CQ53FD0 456 aaPredicted RBP11.77□□□□□ -0.52
RGPD5-201ENST00000016946 PDCD2LQ9BRP1 358 aa11.77□□□□□ -0.52
RGPD5-201ENST00000016946 SPATC1LQ9H0A9 340 aa11.77□□□□□ -0.52
RGPD5-201ENST00000016946 TUBE1Q9UJT0 475 aa11.77□□□□□ -0.52
RGPD5-201ENST00000016946 ADM5C9JUS6 153 aa11.77□□□□□ -0.52
RGPD5-201ENST00000016946 CLTAP09496 248 aa11.77□□□□□ -0.52
RGPD5-201ENST00000016946 FMO5P49326 533 aa11.77□□□□□ -0.52
RGPD5-201ENST00000016946 TMTC4Q5T4D3 741 aa11.77□□□□□ -0.52
RGPD5-201ENST00000016946 MMTAG2Q9BU76 263 aaKnown RBP11.77□□□□□ -0.52
RGPD5-201ENST00000016946 APEX2Q9UBZ4 518 aa11.77□□□□□ -0.52
RGPD5-201ENST00000016946 ZDHHC9Q9Y397 364 aa11.77□□□□□ -0.52
RGPD5-201ENST00000016946 PXDNQ92626 1479 aa11.77□□□□□ -0.53
RGPD5-201ENST00000016946 GPR182O15218 404 aa11.77□□□□□ -0.53
RGPD5-201ENST00000016946 EIF3DO15371 548 aaKnown RBP eCLIP11.77□□□□□ -0.53
RGPD5-201ENST00000016946 NPTXRO95502 500 aa11.77□□□□□ -0.53
RGPD5-201ENST00000016946 PDGFRBP09619 1106 aa11.77□□□□□ -0.53
RGPD5-201ENST00000016946 MYBP10242 640 aa11.77□□□□□ -0.53
RGPD5-201ENST00000016946 CUL1Q13616 776 aa11.77□□□□□ -0.53
RGPD5-201ENST00000016946 CATSPER3Q86XQ3 398 aa11.77□□□□□ -0.53
RGPD5-201ENST00000016946 RBBP8NLQ8NC74 664 aaPredicted RBP11.77□□□□□ -0.53
RGPD5-201ENST00000016946 SH3TC2Q8TF17 1288 aa11.77□□□□□ -0.53
RGPD5-201ENST00000016946 EXOC4Q96A65 974 aa11.77□□□□□ -0.53
RGPD5-201ENST00000016946 SNX24Q9Y343 169 aa11.77□□□□□ -0.53
RGPD5-201ENST00000016946 SLIT1O75093 1534 aa11.77□□□□□ -0.53
RGPD5-201ENST00000016946 CHEK2O96017 543 aa11.77□□□□□ -0.53
RGPD5-201ENST00000016946 DSG3P32926 999 aa11.77□□□□□ -0.53
RGPD5-201ENST00000016946 ALDH7A1P49419 539 aaKnown RBP11.77□□□□□ -0.53
RGPD5-201ENST00000016946 DPYDQ12882 1025 aa11.77□□□□□ -0.53
RGPD5-201ENST00000016946 MKNK1Q9BUB5 465 aa11.77□□□□□ -0.53
RGPD5-201ENST00000016946 IDI2Q9BXS1 227 aa11.77□□□□□ -0.53
RGPD5-201ENST00000016946 STARD7Q9NQZ5 370 aa11.77□□□□□ -0.53
RGPD5-201ENST00000016946 TBK1Q9UHD2 729 aa11.77□□□□□ -0.53
RGPD5-201ENST00000016946 SAYSD1Q9NPB0 183 aa11.77□□□□□ -0.53
RGPD5-201ENST00000016946 DNAJC17Q9NVM6 304 aaKnown RBP11.77□□□□□ -0.53
RGPD5-201ENST00000016946 PCDHB7Q9Y5E2 793 aa11.77□□□□□ -0.53
RGPD5-201ENST00000016946 STRNO43815 780 aa11.77□□□□□ -0.53
RGPD5-201ENST00000016946 ZFXP17010 805 aaPredicted RBP11.77□□□□□ -0.53
RGPD5-201ENST00000016946 PNPLA4P41247 253 aa11.77□□□□□ -0.53
RGPD5-201ENST00000016946 DCAF4L1Q3SXM0 396 aa11.77□□□□□ -0.53
RGPD5-201ENST00000016946 ADGRA1Q86SQ6 560 aa11.77□□□□□ -0.53
RGPD5-201ENST00000016946 ALKBH8Q96BT7 664 aaKnown RBP11.77□□□□□ -0.53
RGPD5-201ENST00000016946 MED15Q96RN5 788 aa11.77□□□□□ -0.53
RGPD5-201ENST00000016946 NT5C1AQ9BXI3 368 aa11.77□□□□□ -0.53
RGPD5-201ENST00000016946 UNC45AQ9H3U1 944 aa11.77□□□□□ -0.53
RGPD5-201ENST00000016946 HPS5Q9UPZ3 1129 aa11.77□□□□□ -0.53
RGPD5-201ENST00000016946 KRT38O76015 456 aa11.76□□□□□ -0.53
RGPD5-201ENST00000016946 TAF6P49848 677 aa11.76□□□□□ -0.53
RGPD5-201ENST00000016946 CEP120Q8N960 986 aa11.76□□□□□ -0.53
RGPD5-201ENST00000016946 IL25Q9H293 177 aa11.76□□□□□ -0.53
RGPD5-201ENST00000016946 TTI1O43156 1089 aa11.76□□□□□ -0.53
RGPD5-201ENST00000016946 PDGFRAP16234 1089 aa11.76□□□□□ -0.53
RGPD5-201ENST00000016946 ST8SIA6P61647 398 aa11.76□□□□□ -0.53
RGPD5-201ENST00000016946 MGAT5BQ3V5L5 792 aa11.76□□□□□ -0.53
RGPD5-201ENST00000016946 FKBP1CQ5VVH2 108 aa11.76□□□□□ -0.53
RGPD5-201ENST00000016946 TTC23LQ6PF05 361 aa11.76□□□□□ -0.53
RGPD5-201ENST00000016946 USP49Q70CQ1 688 aa11.76□□□□□ -0.53
RGPD5-201ENST00000016946 SETD1BQ9UPS6 1966 aaKnown RBP11.76□□□□□ -0.53
RGPD5-201ENST00000016946 NKRFO15226 690 aaKnown RBP eCLIP11.76□□□□□ -0.53
RGPD5-201ENST00000016946 HOXA2O43364 376 aa11.76□□□□□ -0.53
RGPD5-201ENST00000016946 EXTL3O43909 919 aa11.76□□□□□ -0.53
RGPD5-201ENST00000016946 GABPB1Q06547 395 aaPredicted RBP11.76□□□□□ -0.53
RGPD5-201ENST00000016946 CDCA5Q96FF9 252 aa11.76□□□□□ -0.53
RGPD5-201ENST00000016946 RGS7P49802 495 aa11.76□□□□□ -0.53
RGPD5-201ENST00000016946 DBN1Q16643 649 aa11.76□□□□□ -0.53
RGPD5-201ENST00000016946 SH2D4BQ5SQS7 431 aa11.76□□□□□ -0.53
RGPD5-201ENST00000016946 NIF3L1Q9GZT8 377 aa11.76□□□□□ -0.53
RGPD5-201ENST00000016946 LIMA1Q9UHB6 759 aaKnown RBP11.76□□□□□ -0.53
RGPD5-201ENST00000016946 PREX1Q8TCU6 1659 aa11.76□□□□□ -0.53
RGPD5-201ENST00000016946 ZNF189O75820 626 aaPredicted RBP11.76□□□□□ -0.53
RGPD5-201ENST00000016946 HLA-DRAP01903 254 aa11.76□□□□□ -0.53
RGPD5-201ENST00000016946 PCK1P35558 622 aa11.76□□□□□ -0.53
RGPD5-201ENST00000016946 SREBF1P36956 1147 aa11.76□□□□□ -0.53
RGPD5-201ENST00000016946 SLC26A2P50443 739 aa11.76□□□□□ -0.53
RGPD5-201ENST00000016946 COLEC11Q9BWP8 271 aa11.76□□□□□ -0.53
RGPD5-201ENST00000016946 STK33Q9BYT3 514 aa11.76□□□□□ -0.53
RGPD5-201ENST00000016946 TRPV6Q9H1D0 765 aa11.76□□□□□ -0.53
RGPD5-201ENST00000016946 PDE11AQ9HCR9 933 aa11.76□□□□□ -0.53
RGPD5-201ENST00000016946 ZC3H4Q9UPT8 1303 aaKnown RBP11.76□□□□□ -0.53
RGPD5-201ENST00000016946 LRRIQ1Q96JM4 1722 aa11.76□□□□□ -0.53
RGPD5-201ENST00000016946 TOM1L1O75674 476 aa11.75□□□□□ -0.53
RGPD5-201ENST00000016946 SHMT1P34896 483 aa11.75□□□□□ -0.53
RGPD5-201ENST00000016946 EIF3BP55884 814 aaKnown RBP11.75□□□□□ -0.53
RGPD5-201ENST00000016946 NOP14P78316 857 aaKnown RBP11.75□□□□□ -0.53
RGPD5-201ENST00000016946 PPATQ06203 517 aa11.75□□□□□ -0.53
RGPD5-201ENST00000016946 SLC12A1Q13621 1099 aa11.75□□□□□ -0.53
RGPD5-201ENST00000016946 TSNAXIP1Q2TAA8 658 aa11.75□□□□□ -0.53
RGPD5-201ENST00000016946 STKLD1Q8NE28 680 aa11.75□□□□□ -0.53
RGPD5-201ENST00000016946 SEPT8Q92599 483 aa11.75□□□□□ -0.53
RGPD5-201ENST00000016946 FIS1Q9Y3D6 152 aa11.75□□□□□ -0.53
RGPD5-201ENST00000016946 TAC1P20366 129 aa11.75□□□□□ -0.53
RGPD5-201ENST00000016946 CYP2C19P33261 490 aa11.75□□□□□ -0.53
RGPD5-201ENST00000016946 SULT1E1P49888 294 aa11.75□□□□□ -0.53
RGPD5-201ENST00000016946 TPI1P60174 286 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms