RNA–Protein interactions for RNA: ENSMUST00000188587.6

Col6a3-208, Transcript of Collagen, type VI, alpha 3, mousemouse

TSL 5 BASIC

Gene Col6a3, Length 8,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-208ENSMUST00000188587 Ifit3bE9PV48 403 aa13.2□□□□□ -0.3
Col6a3-208ENSMUST00000188587 FAM120AQ6A0A9 1112 aaKnown RBP13.2□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Bfsp2Q6NVD9 416 aa13.2□□□□□ -0.3
Col6a3-208ENSMUST00000188587 IcoslgQ9JHJ8 322 aa13.2□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Bub1bQ9Z1S0 1052 aa13.2□□□□□ -0.3
Col6a3-208ENSMUST00000188587 SftpdP50404 374 aa13.19□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Fam20aQ8CID3 541 aa13.19□□□□□ -0.3
Col6a3-208ENSMUST00000188587 CrotQ9DC50 612 aa13.19□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Vstm4T1NXB5 319 aa13.19□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Cdc42bpbQ7TT50 1713 aa13.19□□□□□ -0.3
Col6a3-208ENSMUST00000188587 BhmtO35490 407 aaKnown RBP13.19□□□□□ -0.3
Col6a3-208ENSMUST00000188587 C2P21180 760 aa13.19□□□□□ -0.3
Col6a3-208ENSMUST00000188587 TfamP40630 243 aa13.19□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Serpina3mQ03734 418 aa13.19□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Ccdc51Q3URS9 406 aa13.19□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Usp15Q8R5H1 981 aa13.19□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Extl3Q9WVL6 918 aa13.19□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Gipc2Q9Z2H7 314 aa13.19□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Zfp277E9Q6D6 583 aaKnown RBP13.19□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Efna5O08543 228 aa13.19□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Pdha1P35486 390 aaKnown RBP13.19□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Sat1P48026 171 aa13.19□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Klhl31Q8BWA5 634 aa13.19□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Pcdhb21Q91V48 774 aa13.19□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Dkc1Q9ESX5 509 aaKnown RBP13.19□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Tmem47Q9JJG6 181 aa13.19□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Adgrb3Q80ZF8 1522 aa13.19□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Gm20721E9Q2U8 318 aa13.19□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Zc3h7bF8VPP8 982 aaKnown RBP13.19□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Ap2a2P17427 938 aaKnown RBP13.19□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Lrrc8eQ66JT1 795 aa13.19□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Snx17Q8BVL3 470 aa13.19□□□□□ -0.3
Col6a3-208ENSMUST00000188587 KynuQ9CXF0 464 aa13.19□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Map3k20Q9ESL4 802 aaKnown RBP13.19□□□□□ -0.3
Col6a3-208ENSMUST00000188587 PtsQ9R1Z7 144 aa13.19□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Gm5795E9PZN8 263 aa13.19□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Capza2P47754 286 aa13.19□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Gfpt1P47856 697 aa13.19□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Eif3eP60229 445 aaKnown RBP13.19□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Smad1P70340 465 aa13.19□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Tigd5Q499M4 642 aa13.19□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Dsg1aQ61495 1057 aa13.19□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Nyap1Q6PFX7 833 aa13.19□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Lsm7Q9CQQ8 103 aaKnown RBP13.19□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Mrpl4Q9DCU6 294 aaKnown RBP13.19□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Zcchc17Q9ESX4 241 aaKnown RBP13.19□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Gm8994E9PV04 411 aaKnown RBP13.19□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Gm7535F7CXE4 302 aa13.19□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Lrrc8dQ8BGR2 859 aa13.19□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Bud13Q8R149 637 aa13.19□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Nsmce3Q9CPR8 279 aa13.19□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Nr5a1P33242 462 aa13.18□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Pcyt1aP49586 367 aa13.18□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Cyp2c37P56654 490 aa13.18□□□□□ -0.3
Col6a3-208ENSMUST00000188587 HpcaP84075 193 aa13.18□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Zfp91Q62511 572 aa13.18□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Krt73Q6NXH9 539 aa13.18□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Sptlc3Q8BG54 563 aa13.18□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Fbxw7Q8VBV4 629 aa13.18□□□□□ -0.3
Col6a3-208ENSMUST00000188587 MrgbpQ9DAT2 204 aa13.18□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Nck2O55033 380 aa13.18□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Grem2O88273 168 aa13.18□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Lrpap1P55302 360 aa13.18□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Fam92bQ3V2J0 292 aa13.18□□□□□ -0.3
Col6a3-208ENSMUST00000188587 H6pdQ8CFX1 789 aa13.18□□□□□ -0.3
Col6a3-208ENSMUST00000188587 NelfcdQ922L6 591 aa13.18□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Abtb1Q99LJ2 478 aa13.18□□□□□ -0.3
Col6a3-208ENSMUST00000188587 ParvaQ9EPC1 372 aa13.18□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Pus3Q9JI38 481 aa13.18□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Cdk12Q14AX6 1484 aaKnown RBP13.18□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Myh1Q5SX40 1942 aa13.18□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Magi3Q9EQJ9 1476 aa13.18□□□□□ -0.3
Col6a3-208ENSMUST00000188587 TwistnbQ78WZ7 330 aaKnown RBP13.18□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Ddah1Q9CWS0 285 aa13.18□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Ndel1Q9ERR1 345 aa13.18□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Gabbr1Q9WV18 960 aa13.18□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Nmt2O70311 529 aa13.18□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Magea6O89010 325 aa13.18□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Lrch1P62046 709 aa13.18□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Magea3Q6T340 320 aa13.18□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Otop3Q80UF9 577 aa13.18□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Cwf19l2Q8BG79 887 aaKnown RBP13.18□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Gucy1b2Q8BXH3 824 aa13.18□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Dhx32Q8BZS9 744 aa13.18□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Trim47Q8C0E3 641 aa13.18□□□□□ -0.3
Col6a3-208ENSMUST00000188587 DarsQ922B2 501 aaKnown RBP13.18□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Snx24Q9CRB0 169 aa13.18□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Pkp3Q9QY23 797 aa13.18□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Gm4869A0A1B0GSG7 984 aa13.18□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Arhgap26Q6ZQ82 814 aa13.18□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Heatr3Q8BQM4 679 aa13.18□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Alpk1Q9CXB8 1231 aa13.18□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Dmrtc1Q9D9R7 182 aa13.18□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Ccdc22Q9JIG7 627 aa13.18□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Gm5415E9PXF3 478 aa13.18□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Tcp10bE9PYJ0 438 aa13.18□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Tcp10cE9Q046 482 aa13.18□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Cd86P42082 309 aa13.18□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Letm2Q7TNU7 480 aa13.18□□□□□ -0.3
Col6a3-208ENSMUST00000188587 Kif19Q99PT9 997 aa13.18□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 26.9 ms