RNA–Protein interactions for RNA: ENSMUST00000108908.5

Scn8a-203, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 7,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-203ENSMUST00000108908 Shcbp1Q9Z179 668 aa11.7□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Frmd7A2AD83 703 aa11.7□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Gm10436L7N1Y3 520 aa11.7□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Npy5rO70342 466 aa11.7□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Prl3b1P09586 222 aa11.7□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Armc7Q3UJZ3 198 aa11.7□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Spdye4aQ5IBH6 268 aa11.7□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Tmem117Q8BH18 514 aa11.7□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Snx10Q9CWT3 201 aa11.7□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Rassf7Q9DD19 359 aa11.7□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Osbpl9A2A8Z1 736 aa11.69□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Kcna1P16388 495 aa11.69□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Rpusd2Q149F1 553 aa11.69□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Khdrbs1Q60749 443 aaKnown RBP11.69□□□□□ -0.54
Scn8a-203ENSMUST00000108908 CybbQ61093 570 aa11.69□□□□□ -0.54
Scn8a-203ENSMUST00000108908 PrameQ9D4Z5 464 aa11.69□□□□□ -0.54
Scn8a-203ENSMUST00000108908 M1apQ9Z0E1 529 aa11.69□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Ttll10A4Q9F3 704 aa11.69□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Got1P05201 413 aa11.69□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Tmem232Q5K6N0 675 aa11.69□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Il17raQ60943 864 aa11.69□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Fbxo41Q6NS60 873 aa11.69□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Polr2eQ80UW8 210 aaKnown RBP11.69□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Pde10aQ8CA95 790 aa11.69□□□□□ -0.54
Scn8a-203ENSMUST00000108908 NemfQ8CCP0 1064 aaKnown RBP11.69□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Ap3m2Q8R2R9 418 aa11.69□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Nr3c2Q8VII8 978 aa11.69□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Tex9Q9D845 387 aa11.69□□□□□ -0.54
Scn8a-203ENSMUST00000108908 CpdO89001 1377 aa11.69□□□□□ -0.54
Scn8a-203ENSMUST00000108908 AglF8VPN4 1532 aa11.69□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Zfp266E9Q2S7 604 aa11.69□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Lsp1P19973 330 aa11.69□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Col6a1Q04857 1025 aa11.69□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Gcnt1Q09324 428 aa11.69□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Kcnk9Q3LS21 402 aa11.69□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Zfp454Q80Y34 536 aa11.69□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Fbxl5Q8C2S5 690 aa11.69□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Prr33Q8C494 260 aa11.69□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Znrd1-asQ8R0E5 213 aa11.69□□□□□ -0.54
Scn8a-203ENSMUST00000108908 DtnaQ9D2N4 746 aa11.69□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Pik3c2bE9QAN8 1632 aa11.69□□□□□ -0.54
Scn8a-203ENSMUST00000108908 E230025N22RikG5E8S3 482 aa11.69□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Slc16a1P53986 493 aa11.69□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Map4k1P70218 827 aa11.69□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Fhod1Q6P9Q4 1197 aa11.69□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Fsd1lQ8BYN5 507 aa11.69□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Fam118bQ8C569 351 aa11.69□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Wrap53Q8VC51 532 aa11.69□□□□□ -0.54
Scn8a-203ENSMUST00000108908 IrgqQ8VIM9 583 aa11.69□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Slc5a5Q99PN0 618 aa11.69□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Zscan4-ps3A0A1B0GRH6 506 aa11.69□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Zscan4-ps2A0A1C7CYU6 506 aa11.69□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Ddit3P35639 168 aa11.69□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Nfe2Q07279 373 aa11.69□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Fam8a1Q3URQ4 399 aa11.69□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Thnsl1Q8BH55 747 aa11.69□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Tada2aQ8CHV6 443 aa11.69□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Pcdhgb4Q91XX6 912 aa11.69□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Nsmce3Q9CPR8 279 aa11.69□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Morf4l2Q9R0Q4 288 aa11.69□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Ubr1O70481 1757 aa11.69□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Gm10134F6ZQC6 126 aa11.68□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Morc3F7BJB9 942 aaKnown RBP11.68□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Ass1P16460 412 aa11.68□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Rbm20Q3UQS8 1199 aaKnown RBP11.68□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Tdpoz4Q6YCH2 370 aa11.68□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Galnt5Q8C102 930 aa11.68□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Slc44a4Q91VA1 707 aa11.68□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Msi2Q920Q6 346 aaKnown RBP11.68□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Rps6kb2Q9Z1M4 485 aa11.68□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Slc6a16A0A1L1SR47 742 aa11.68□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Acap2Q6ZQK5 770 aa11.68□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Trim17Q7TPM3 477 aa11.68□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Abcf2Q99LE6 628 aaKnown RBP11.68□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Ndufaf7Q9CWG8 436 aa11.68□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Psmd10Q9Z2X2 231 aa11.68□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Usp17lbE9Q9U0 468 aa11.68□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Mdm4O35618 489 aa11.68□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Sema3fO88632 785 aa11.68□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Mucl2P02815 138 aa11.68□□□□□ -0.54
Scn8a-203ENSMUST00000108908 RalaP63321 206 aa11.68□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Actl9Q8CG27 415 aa11.68□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Olfr395Q8VGR3 312 aa11.68□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Ugp2Q91ZJ5 508 aa11.68□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Kcng1A2BDX4 514 aa11.68□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Guca2bO09051 106 aa11.68□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Uchl4P58321 233 aa11.68□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Lrch1P62046 709 aa11.68□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Ccdc127Q3TC33 260 aa11.68□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Ccdc50Q810U5 305 aaKnown RBP11.68□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Tmem260Q8BMD6 703 aa11.68□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Uba3Q8C878 462 aa11.68□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Dkc1Q9ESX5 509 aaKnown RBP11.68□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Bub1bQ9Z1S0 1052 aa11.68□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Rfx8D3YU81 596 aa11.68□□□□□ -0.54
Scn8a-203ENSMUST00000108908 OsbpQ3B7Z2 805 aa11.68□□□□□ -0.54
Scn8a-203ENSMUST00000108908 B3galnt2Q8BG28 504 aa11.68□□□□□ -0.54
Scn8a-203ENSMUST00000108908 Slc25a24Q8BMD8 475 aa11.68□□□□□ -0.54
Scn8a-203ENSMUST00000108908 TrabdQ99JY4 376 aa11.68□□□□□ -0.54
Scn8a-203ENSMUST00000108908 MycbpQ9EQS3 103 aa11.68□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 26.7 ms