RNA–Protein interactions for RNA: ENSMUST00000106035.7

Ccdc28b-202, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28b, Length 821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-202ENSMUST00000106035 AurkbO70126 345 aa13.38□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Itm2bO89051 266 aa13.38□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Ccl4P14097 92 aa13.38□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Hk1P17710 974 aa13.38□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Tal1P22091 329 aa13.38□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 FechP22315 420 aaKnown RBP13.38□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Dbx1P52950 335 aa13.38□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Mcm6P97311 821 aa13.38□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Serpina1eQ00898 413 aa13.38□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Col9a1Q05722 921 aa13.38□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Kiaa1468Q148V7 1216 aa13.38□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Tekt4Q149S1 447 aa13.38□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Zscan4fQ3URS2 506 aa13.38□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Cyp3a11Q64459 504 aa13.38□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Dhx37Q6NZL1 1150 aa13.38□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Casd1Q7TN73 797 aa13.38□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Mapk15Q80Y86 549 aa13.38□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Q8BHR8 331 aa13.38□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 GancQ8BVW0 898 aa13.38□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Ccser1Q8C0C4 895 aa13.38□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Gpr158Q8C419 1200 aa13.38□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Apol10aQ8CCA5 318 aa13.38□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Gas2l1Q8JZP9 678 aa13.38□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Stxbp5Q8K400 1152 aaKnown RBP13.38□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Olfr393Q8VGR6 312 aa13.38□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Fzd2Q9JIP6 570 aa13.38□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Tnfrsf10bQ9QZM4 381 aa13.38□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Epm2aQ9WUA5 330 aa13.38□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Col12a1Q60847 3120 aa13.37□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Mmrn2A6H6E2 943 aa13.37□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 2010300C02RikE9Q3M9 1175 aa13.37□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Mroh4G3X8W1 983 aa13.37□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Vmn2r1O70410 912 aa13.37□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 TnfP06804 235 aa13.37□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Ccnd2P30280 289 aa13.37□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Ppp3ccP48455 513 aa13.37□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Gp1bbP56400 206 aa13.37□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Gtf2bP62915 316 aa13.37□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Grin2cQ01098 1239 aa13.37□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Plk1Q07832 603 aa13.37□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Znf235Q61116 645 aa13.37□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Nr2e1Q64104 385 aa13.37□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Ccdc66Q6NS45 935 aa13.37□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 RragbQ6NTA4 374 aa13.37□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Usp49Q6P9L4 685 aa13.37□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Zbtb24Q80X44 710 aa13.37□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Plekhs1Q8BW88 474 aa13.37□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 LgsnQ8CIX8 563 aa13.37□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Frat2Q8K025 231 aa13.37□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Plekhh3Q8VCE9 796 aa13.37□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Atoh8Q99NA2 322 aa13.37□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Slamf8Q9D3G2 278 aa13.37□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 PollQ9QXE2 573 aaKnown RBP13.37□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Frem3Q5H8B9 2123 aa13.36□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Fam170bE9PXT9 378 aa13.36□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Gm21973F6WEZ7 68 aa13.36□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Serpinb8O08800 374 aaKnown RBP13.36□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Akap3O88987 864 aa13.36□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Wnt6P22727 364 aa13.36□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Rfx1P48377 963 aa13.36□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Oaz1P54369 227 aa13.36□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Sash1P59808 1230 aa13.36□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Tbx3P70324 741 aa13.36□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Flt3Q00342 1000 aa13.36□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Nsun7Q14AW5 724 aa13.36□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Rbm20Q3UQS8 1199 aaKnown RBP13.36□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 LpoQ5SW46 710 aa13.36□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 CybbQ61093 570 aa13.36□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Cd37Q61470 281 aa13.36□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Cd300lfQ6SJQ7 337 aa13.36□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Klhl17Q6TDP3 640 aa13.36□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 GopcQ8BH60 463 aa13.36□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Haus7Q8BKT8 364 aa13.36□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Castor2Q8CAB8 329 aa13.36□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Enox2Q8R0Z2 598 aa13.36□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Syt12Q920N7 421 aa13.36□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Yeats4Q9CR11 227 aaKnown RBP13.36□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Mis18aQ9CZJ6 204 aa13.36□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Lrrc71Q9D3W5 558 aa13.36□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Lrp2bpQ9D4C6 346 aa13.36□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 CenpkQ9ESN5 271 aa13.36□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Padi3Q9Z184 664 aa13.36□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Ccdc173A0JLY1 547 aa13.35□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Lrrc38A2VDH3 298 aa13.35□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 3110082J24RikF6Z6Z2 108 aa13.35□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Nptx2O70340 429 aa13.35□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 AdprhP54923 362 aa13.35□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 B3gat3P58158 335 aa13.35□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Scarf2P59222 833 aa13.35□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Rin3P59729 980 aa13.35□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Vps51Q3UVL4 782 aa13.35□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Rsad1Q5SUV1 442 aa13.35□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 SkiQ60698 725 aa13.35□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 AlcamQ61490 583 aa13.35□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Znf653Q6YND2 615 aa13.35□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 IqcgQ80W32 419 aa13.35□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Rnf168Q80XJ2 565 aa13.35□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Ttc26Q8BS45 554 aa13.35□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 R3hcc1Q8BSI6 488 aa13.35□□□□□ -0.27
Ccdc28b-202ENSMUST00000106035 Tmem161bQ8C2L6 487 aa13.35□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 28.5 ms