RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 NfrkbQ6PIJ4 1296 aaKnown RBP11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 HibchQ8QZS1 385 aa11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Ccdc80Q8R2G6 949 aa11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Zbtb1Q91VL9 713 aa11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Chordc1Q9D1P4 331 aaKnown RBP11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Gins2Q9D600 185 aa11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Acot5Q6Q2Z6 421 aa11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 WhrnQ80VW5 918 aa11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Fndc3aQ8BX90 1198 aa11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Card9A2AIV8 536 aa11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Fbxl16A2RT62 479 aa11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Anxa8O35640 327 aa11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 SftpdP50404 374 aa11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Pbxip1Q3TVI8 727 aa11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Odr4Q4PJX1 447 aa11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Flot2Q60634 428 aaKnown RBP11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Hars2Q99KK9 505 aa11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 AfdnQ9QZQ1 1820 aaKnown RBP11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Psmc1P62192 440 aa11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Casp4P70343 373 aa11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 S100gP97816 79 aa11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 ScinQ60604 715 aa11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Mageb18Q8BQR7 327 aa11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Tada1Q99LM9 335 aa11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Krt16Q9Z2K1 469 aa11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Gm3402K7N5P2 326 aa11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Olfr121Q5CZY0 321 aa11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Nfe2l2Q60795 597 aa11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 FtcdQ91XD4 541 aa11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 FignQ9ERZ6 759 aa11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Trim12cD3Z3L3 497 aa11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Speer4cG3UXD1 256 aa11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Gm10354K7N6A0 256 aa11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Scg3P47867 471 aa11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 CtshP49935 333 aa11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Hif1aQ61221 836 aaKnown RBP11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Epc1Q8C9X6 813 aa11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Ascc2Q91WR3 749 aa11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Slc40a1Q9JHI9 570 aa11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Trpc4Q9QUQ5 974 aa11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Top3bQ9Z321 862 aaKnown RBP11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Rnf123Q5XPI3 1314 aa11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Hoxc6P10629 235 aa11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Pcsk1P63239 753 aa11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Hsph1Q61699 858 aaKnown RBP11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Strip2Q8C9H6 844 aa11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Scyl3Q9DBQ7 735 aa11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Plekhg4A0A1L1SU27 1217 aa11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 FancbQ5XJY6 703 aa11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Epha7Q61772 998 aa11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Tlk1Q8C0V0 766 aa11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Alas1Q8VC19 642 aa11.01□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Ifi206G3UZV2 921 aa11□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Zbtb11G5E8B9 1050 aaKnown RBP11□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Krr1Q8BGA5 380 aaKnown RBP11□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Osbpl6Q8BXR9 959 aa11□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Snx30Q8CE50 437 aa11□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Pabpc6Q9D4E6 643 aaKnown RBP11□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Atp13a1Q9EPE9 1200 aaKnown RBP11□□□□□ -0.65
Scn8a-201ENSMUST00000082209 TriqkB2B9E1 86 aa11□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Grid1Q61627 1009 aa11□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Zfp341Q6PGC9 846 aa11□□□□□ -0.65
Scn8a-201ENSMUST00000082209 FdpsQ920E5 353 aa11□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Gm6370A0A0G2JGX9 315 aa11□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Gm6309L7N481 315 aa11□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Apoa4P06728 395 aa11□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Serpinb6dQ3UWK8 375 aa11□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Rabgap1lA6H6A9 815 aa11□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Gm17615E9Q9P2 165 aa11□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Gucy2gQ6TL19 1100 aa11□□□□□ -0.65
Scn8a-201ENSMUST00000082209 TwistnbQ78WZ7 330 aaKnown RBP11□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Phka2Q8BWJ3 1235 aa11□□□□□ -0.65
Scn8a-201ENSMUST00000082209 AglF8VPN4 1532 aa11□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Phldb3E9QAF4 648 aa11□□□□□ -0.65
Scn8a-201ENSMUST00000082209 SucoQ8C341 1250 aa11□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Pcdhgc5Q91XW9 944 aa11□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Snx24Q9CRB0 169 aa11□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Dmrtc1Q9D9R7 182 aa11□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Klra10Q9R1G6 266 aa11□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Gm8994E9PV04 411 aaKnown RBP11□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Ccdc144bE9PVZ3 520 aa11□□□□□ -0.65
Scn8a-201ENSMUST00000082209 ChrngP04760 519 aa11□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Cyth2P63034 400 aaKnown RBP11□□□□□ -0.65
Scn8a-201ENSMUST00000082209 NficP70255 439 aa11□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Ago2Q8CJG0 860 aaKnown RBP11□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Mmgt1Q8K273 131 aaKnown RBP11□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Sugt1Q9CX34 336 aa11□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Iqcf1Q9D9K8 182 aa11□□□□□ -0.65
Scn8a-201ENSMUST00000082209 AK157302I3ITR1 129 aa11□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Mark3Q03141 753 aa11□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Dpp9Q8BVG4 862 aa11□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Isca1Q9D924 129 aa11□□□□□ -0.65
Scn8a-201ENSMUST00000082209 S100a9P31725 113 aa11□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Sptlc3Q8BG54 563 aa11□□□□□ -0.65
Scn8a-201ENSMUST00000082209 LrgukQ9D5S7 820 aa11□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Gid8Q9D7M1 228 aa11□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Nccrp1G3X9C2 266 aa11□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Atp11aP98197 1187 aa11□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Pdp2Q504M2 532 aa11□□□□□ -0.65
Scn8a-201ENSMUST00000082209 Fxr1Q61584 677 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 105.2 ms