RNA–Protein interactions for RNA: YNL232W

CSL4, Transcript of Exosome non-catalytic core component, yeast

Gene CSL4, Length 879 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSL4	YNL232W	YPL283W-B	P0CX97	160 aa		4.85	□□□□□ -1.63
CSL4	YNL232W	YPR204C-A	P0CX98	160 aa		4.85	□□□□□ -1.63
CSL4	YNL232W	YFL068W	P0CX99	160 aa		4.85	□□□□□ -1.63
CSL4	YNL232W	YLL066W-A	P0CY00	160 aa		4.85	□□□□□ -1.63
CSL4	YNL232W	YLL067W-A	P0CY01	160 aa		4.85	□□□□□ -1.63
CSL4	YNL232W	YPK2	P18961	677 aa		4.85	□□□□□ -1.63
CSL4	YNL232W	DBP3	P20447	523 aa	Known RBP	4.85	□□□□□ -1.63
CSL4	YNL232W	OLE1	P21147	510 aa	Known RBP	4.85	□□□□□ -1.63
CSL4	YNL232W	RRP7	P25368	297 aa	Predicted RBP	4.85	□□□□□ -1.63
CSL4	YNL232W	HMX1	P32339	317 aa		4.85	□□□□□ -1.63
CSL4	YNL232W	TIM12	P32830	109 aa		4.85	□□□□□ -1.63
CSL4	YNL232W	YUH1	P35127	236 aa		4.85	□□□□□ -1.63
CSL4	YNL232W	YBR032W	P38223	100 aa		4.85	□□□□□ -1.63
CSL4	YNL232W	RCK1	P38622	512 aa		4.85	□□□□□ -1.63
CSL4	YNL232W	YHR097C	P38809	366 aa	Known RBP	4.85	□□□□□ -1.63
CSL4	YNL232W	COX18	P53239	316 aa		4.85	□□□□□ -1.63
CSL4	YNL232W	MMT1	Q03218	510 aa		4.85	□□□□□ -1.63
CSL4	YNL232W	TAZ1	Q06510	381 aa		4.85	□□□□□ -1.63
CSL4	YNL232W	IZH2	Q12442	317 aa		4.85	□□□□□ -1.63
CSL4	YNL232W	YGR035W-A	Q45U48	73 aa		4.85	□□□□□ -1.63
CSL4	YNL232W	MF(ALPHA)1	P01149	165 aa		4.84	□□□□□ -1.63
CSL4	YNL232W	CNA1	P23287	553 aa		4.84	□□□□□ -1.63
CSL4	YNL232W	PHO91	P27514	894 aa		4.84	□□□□□ -1.63
CSL4	YNL232W	CAM1	P29547	415 aa	Known RBP	4.84	□□□□□ -1.63
CSL4	YNL232W	TRS65	P32893	560 aa		4.84	□□□□□ -1.63
CSL4	YNL232W	SUR1	P33300	382 aa		4.84	□□□□□ -1.63
CSL4	YNL232W	CLG1	P35190	452 aa		4.84	□□□□□ -1.63
CSL4	YNL232W	YNK1	P36010	153 aa	Known RBP	4.84	□□□□□ -1.63
CSL4	YNL232W	GPX1	P36014	167 aa		4.84	□□□□□ -1.63
CSL4	YNL232W	PRY2	P36110	329 aa		4.84	□□□□□ -1.63
CSL4	YNL232W	CTR2	P38865	189 aa		4.84	□□□□□ -1.63
CSL4	YNL232W	LOC1	P43586	204 aa	Predicted RBP	4.84	□□□□□ -1.63
CSL4	YNL232W	YDL186W	P48568	277 aa		4.84	□□□□□ -1.63
CSL4	YNL232W	BRR6	P53062	197 aa		4.84	□□□□□ -1.63
CSL4	YNL232W	YIP5	P53108	310 aa		4.84	□□□□□ -1.63
CSL4	YNL232W	MPP6	P53725	186 aa	Predicted RBP	4.84	□□□□□ -1.63
CSL4	YNL232W	ARC35	P53731	342 aa	Known RBP	4.84	□□□□□ -1.63
CSL4	YNL232W	MRPL13	Q02204	264 aa		4.84	□□□□□ -1.63
CSL4	YNL232W	PET191	Q02772	108 aa		4.84	□□□□□ -1.63
CSL4	YNL232W	RAX2	Q12465	1220 aa		4.84	□□□□□ -1.63
CSL4	YNL232W	NOT5	Q12514	560 aa	Predicted RBP	4.84	□□□□□ -1.63
CSL4	YNL232W	GCN4	P03069	281 aa		4.83	□□□□□ -1.64
CSL4	YNL232W	YMR085W	P0CF18	432 aa		4.83	□□□□□ -1.64
CSL4	YNL232W	RPS8A	P0CX39	200 aa	Known RBP	4.83	□□□□□ -1.64
CSL4	YNL232W	RPS8B	P0CX40	200 aa	Known RBP	4.83	□□□□□ -1.64
CSL4	YNL232W	PRE2	P30656	287 aa	Known RBP	4.83	□□□□□ -1.64
CSL4	YNL232W	LTV1	P34078	463 aa		4.83	□□□□□ -1.64
CSL4	YNL232W	MNN9	P39107	395 aa	Known RBP	4.83	□□□□□ -1.64
CSL4	YNL232W	MTW1	P39731	289 aa		4.83	□□□□□ -1.64
CSL4	YNL232W	NAS2	P40555	220 aa		4.83	□□□□□ -1.64
CSL4	YNL232W	SYF2	P53277	215 aa	Predicted RBP	4.83	□□□□□ -1.64
CSL4	YNL232W	SMM1	P53720	384 aa	Known RBP	4.83	□□□□□ -1.64
CSL4	YNL232W	KRE28	Q04431	385 aa		4.83	□□□□□ -1.64
CSL4	YNL232W	CTS2	Q06350	511 aa		4.83	□□□□□ -1.64
CSL4	YNL232W	SYO1	Q07395	620 aa		4.83	□□□□□ -1.64
CSL4	YNL232W	ARG3	P05150	338 aa		4.82	□□□□□ -1.64
CSL4	YNL232W	RPL6B	P05739	176 aa	Known RBP	4.82	□□□□□ -1.64
CSL4	YNL232W	MET17	P06106	444 aa		4.82	□□□□□ -1.64
CSL4	YNL232W	URE2	P23202	354 aa	Known RBP	4.82	□□□□□ -1.64
CSL4	YNL232W	SAC1	P32368	623 aa	Known RBP	4.82	□□□□□ -1.64
CSL4	YNL232W	ARP2	P32381	391 aa	Known RBP	4.82	□□□□□ -1.64
CSL4	YNL232W	DOA4	P32571	926 aa		4.82	□□□□□ -1.64
CSL4	YNL232W	GLC7	P32598	312 aa	Known RBP	4.82	□□□□□ -1.64
CSL4	YNL232W	BUR6	P40096	142 aa		4.82	□□□□□ -1.64
CSL4	YNL232W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.82	□□□□□ -1.64	not detected
CSL4	YNL232W	MET28	P40573	187 aa		4.82	□□□□□ -1.64
CSL4	YNL232W	CAF16	P43569	289 aa		4.82	□□□□□ -1.64
CSL4	YNL232W	MRM2	P53123	320 aa		4.82	□□□□□ -1.64
CSL4	YNL232W	YGR054W	P53235	642 aa	Known RBP	4.82	□□□□□ -1.64
CSL4	YNL232W	VPS71	Q03433	280 aa		4.82	□□□□□ -1.64
CSL4	YNL232W	YDL086W	Q07505	273 aa		4.82	□□□□□ -1.64
CSL4	YNL232W	RPL39	P04650	51 aa		4.81	□□□□□ -1.64
CSL4	YNL232W	CCA1	P21269	546 aa		4.81	□□□□□ -1.64
CSL4	YNL232W	ELO2	P25358	347 aa		4.81	□□□□□ -1.64
CSL4	YNL232W	SNC1	P31109	117 aa		4.81	□□□□□ -1.64
CSL4	YNL232W	MSN4	P33749	630 aa		4.81	□□□□□ -1.64
CSL4	YNL232W	DAD2	P36162	133 aa		4.81	□□□□□ -1.64
CSL4	YNL232W	RBG1	P39729	369 aa		4.81	□□□□□ -1.64
CSL4	YNL232W	IRC7	P43623	340 aa		4.81	□□□□□ -1.64
CSL4	YNL232W	TAX4	P47030	604 aa		4.81	□□□□□ -1.64
CSL4	YNL232W	YPL108W	Q02872	168 aa	Predicted RBP	4.81	□□□□□ -1.64
CSL4	YNL232W	YDR387C	Q04162	555 aa		4.81	□□□□□ -1.64
CSL4	YNL232W	SPO77	Q06134	477 aa		4.81	□□□□□ -1.64
CSL4	YNL232W	PRP11	Q07350	266 aa	Predicted RBP	4.81	□□□□□ -1.64
CSL4	YNL232W	RRT8	Q08219	342 aa		4.81	□□□□□ -1.64
CSL4	YNL232W	DIA2	Q08496	732 aa	Predicted RBP	4.81	□□□□□ -1.64
CSL4	YNL232W	SRL1	Q08673	210 aa		4.81	□□□□□ -1.64
CSL4	YNL232W	TIM9	O74700	87 aa		4.8	□□□□□ -1.64
CSL4	YNL232W	YML003W	P0CF16	290 aa		4.8	□□□□□ -1.64
CSL4	YNL232W	YAK1	P14680	807 aa		4.8	□□□□□ -1.64
CSL4	YNL232W	PWP1	P21304	576 aa	Known RBP	4.8	□□□□□ -1.64
CSL4	YNL232W	JEN1	P36035	616 aa		4.8	□□□□□ -1.64
CSL4	YNL232W	YHR035W	P38769	630 aa		4.8	□□□□□ -1.64
CSL4	YNL232W	PSD1	P39006	500 aa		4.8	□□□□□ -1.64
CSL4	YNL232W	YGR201C	P42936	225 aa		4.8	□□□□□ -1.64
CSL4	YNL232W	NUP57	P48837	541 aa		4.8	□□□□□ -1.64
CSL4	YNL232W	MPC1	P53157	130 aa	Known RBP	4.8	□□□□□ -1.64
CSL4	YNL232W	YNR062C	P53748	327 aa		4.8	□□□□□ -1.64
CSL4	YNL232W	YNR064C	P53750	290 aa		4.8	□□□□□ -1.64
CSL4	YNL232W	RRP17	Q04031	235 aa	Predicted RBP	4.8	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms